Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0722
(715 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 30 0.38
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 29 0.50
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 29 0.66
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 27 2.0
SPCC1682.09c |||guanine nucleotide transporter|Schizosaccharomyc... 27 2.0
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 27 2.7
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 27 2.7
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 27 2.7
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 27 3.5
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 26 4.7
SPCC4B3.16 |tip41||TIP41-like type 2a phosphatase regulator Tip4... 26 4.7
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 26 4.7
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 4.7
SPAC29B12.14c |||purine transporter |Schizosaccharomyces pombe|c... 26 6.1
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 26 6.1
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 26 6.1
SPCC188.03 |cnd3||condensin subunit Cnd3 |Schizosaccharomyces po... 25 8.1
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 29.9 bits (64), Expect = 0.38
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 505 GSFSGTFSTVLFQPLDLVKTRLQNPNHHVMGG 600
G SGT +T+L QP D+ KT Q H + G
Sbjct: 253 GGISGTLATLLTQPFDVSKTAKQVHGHTLTRG 284
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 29.5 bits (63), Expect = 0.50
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 496 VSCGSFSGTFSTVLFQPLDLVKTRLQ 573
++ G+ G S+ QPLDL+KTR Q
Sbjct: 18 LAAGALGGFISSTTLQPLDLLKTRCQ 43
Score = 28.7 bits (61), Expect = 0.87
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 487 VQSVSCGSFSGTFSTVLFQPLDLVKTRLQNPNH 585
+ +V G SG +T + P D++KTR+Q H
Sbjct: 211 IVNVMSGLISGATATAITNPFDMLKTRVQLEPH 243
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 29.1 bits (62), Expect = 0.66
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +1
Query: 442 LKVHQNGHRD*LSSGVQSVSCGSFSGTFSTVLFQPLDLVKTRLQNPN 582
L VH H+ S + S S S V+ PLD +K R Q N
Sbjct: 3 LPVHNQPHKAHSGSPASTFSAALVSSAISNVIGYPLDSIKVRQQTYN 49
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 27.5 bits (58), Expect = 2.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 505 GSFSGTFSTVLFQPLDLVKTRLQ 573
G+ G F T L P D++K+R+Q
Sbjct: 206 GTIGGIFGTFLSTPFDVIKSRIQ 228
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 499 SCGSFSGTFSTVLFQPLDLVKTRLQ 573
+ G+ +G + PLD+VKTR+Q
Sbjct: 13 AAGAVAGISEVLTLYPLDVVKTRMQ 37
>SPCC1682.09c |||guanine nucleotide transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 300
Score = 27.5 bits (58), Expect = 2.0
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 526 STVLFQPLDLVKTRLQNPN 582
S ++ PLD++KTR+QN N
Sbjct: 225 SLIVSAPLDVIKTRIQNKN 243
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 27.1 bits (57), Expect = 2.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 505 GSFSGTFSTVLFQPLDLVKTRLQN 576
G +G + PLD+VKTRLQ+
Sbjct: 55 GGVAGMLGAIATAPLDVVKTRLQS 78
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 27.1 bits (57), Expect = 2.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 505 GSFSGTFSTVLFQPLDLVKTRLQNPN 582
G+FSG + P+D +KTR+Q N
Sbjct: 26 GAFSGILEHSVMYPVDAIKTRMQMLN 51
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 505 GSFSGTFSTVLFQPLDLVKTRLQ 573
G SG ++ L PLD+VKT LQ
Sbjct: 211 GGLSGAIASSLTTPLDVVKTLLQ 233
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 27.1 bits (57), Expect = 2.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 505 GSFSGTFSTVLFQPLDLVKTRLQ 573
G +GT ST++ PLDL K ++Q
Sbjct: 7 GLAAGTASTLIMHPLDLAKIQMQ 29
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 481 SGVQSVSCGSFSGTFSTVLFQPLDLVKTRLQN 576
S V + GS +G + QP+D VK+R+Q+
Sbjct: 202 STVTTFLVGSVAGIITVYCTQPIDTVKSRMQS 233
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 505 GSFSGTFSTVLFQPLDLVKTRLQ 573
GS +G + L PLD+ KTRLQ
Sbjct: 221 GSLAGAGAGFLTTPLDVAKTRLQ 243
>SPCC4B3.16 |tip41||TIP41-like type 2a phosphatase regulator
Tip41|Schizosaccharomyces pombe|chr 3|||Manual
Length = 252
Score = 26.2 bits (55), Expect = 4.7
Identities = 14/61 (22%), Positives = 29/61 (47%)
Frame = +3
Query: 249 DHALLYRINPIYYSDYSDTI*AYI*SYFNLNVLFAIGSTISNTINLVFTPKILLDEEYLV 428
++ ++Y + YY+DY TI + ++ + + ++ NL F IL ++E
Sbjct: 95 EYPVIYPFDWTYYTDYQGTIQRPNAKFIEIDQVIPVQKILNAGQNLWFNEIILFEDELAD 154
Query: 429 N 431
N
Sbjct: 155 N 155
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 26.2 bits (55), Expect = 4.7
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 502 CGSFSGTFSTVLFQPLDLVKTR 567
CG+ +G F+T+ PLD ++T+
Sbjct: 110 CGTSAGIFATLTSYPLDTMRTK 131
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 26.2 bits (55), Expect = 4.7
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +1
Query: 133 VATIGNAPGVSYYIYLNLLRLSLAEAAYMYFSNAVAQKM--TMLYCIESTLSTIQTTRIR 306
+ +G P + YY L+ L+ + S+ V + MLYC S +S + + IR
Sbjct: 632 IFALGEKPQLMYYESDKLVITPLSCTEMLNISSYVNPSLGVNMLYCTNSYISLAKMSEIR 691
Query: 307 SRLTFEAIS 333
S L + +S
Sbjct: 692 S-LNVQTVS 699
>SPAC29B12.14c |||purine transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 581
Score = 25.8 bits (54), Expect = 6.1
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +1
Query: 535 LFQPLDLVKTRLQNPNHH 588
++ PLDL+K+ L + NHH
Sbjct: 319 IWNPLDLLKSFLDHSNHH 336
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 25.8 bits (54), Expect = 6.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 475 LSSGVQSVSCGSFSGTFSTVLFQPLDLVKTRLQ 573
+ ++ G +G S+++ PLD+VKTR Q
Sbjct: 2 VDDSLKDAIAGGAAGLASSLVVAPLDVVKTRKQ 34
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 502 CGSFSGTFSTVLFQPLDLVKTRLQ 573
C + +T + PLD+VKTR Q
Sbjct: 179 CSALGTVVATTISTPLDIVKTRYQ 202
>SPCC188.03 |cnd3||condensin subunit Cnd3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 875
Score = 25.4 bits (53), Expect = 8.1
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 111 KLISKLKSCNYRQRSRRFILYLFKSFTIIPGRSSLHVFFERRCAENDHA 257
K+ + L S +Y++ R+ Y FT+ S+ FER +N+ A
Sbjct: 773 KIPTDLPSSDYQRTKRKLETYESHGFTMDSTSLSILAKFERMLLQNEEA 821
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,942,307
Number of Sequences: 5004
Number of extensions: 58905
Number of successful extensions: 160
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 333194204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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