Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0722
(715 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0289 + 42540059-42541141 35 0.056
03_02_0148 - 5928703-5928931,5929099-5929171,5929288-5929408,592... 33 0.17
03_02_0489 + 8836306-8836500,8836906-8837082,8837175-8837321,883... 33 0.23
02_05_0230 + 27029725-27030871,27030995-27031113,27031225-270313... 33 0.23
01_07_0083 + 40970890-40971015,40971886-40971994,40972679-409727... 33 0.23
01_05_0410 + 21914995-21915168,21915268-21915353,21915446-219156... 32 0.52
01_01_0282 - 2349336-2349583,2349719-2349786,2349880-2349950,235... 31 0.91
05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717 31 1.2
03_01_0644 - 4719954-4720022,4720445-4720912,4721009-4721312,472... 30 2.1
01_03_0118 - 12688137-12688162,12688236-12688395,12689442-126895... 30 2.1
11_04_0086 + 13362788-13362937,13363887-13363970,13364233-133642... 29 2.8
03_02_0646 + 10141967-10142476,10143721-10144254 29 3.7
01_06_0447 + 29452194-29452361,29453232-29453317,29453403-294536... 29 3.7
01_05_0099 - 18098169-18098390,18098878-18098972,18099063-180991... 29 3.7
05_07_0283 - 28937027-28937110,28937211-28937549,28937641-289377... 29 4.8
10_08_0041 - 14374684-14377339,14377371-14378233 28 6.4
06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627 28 6.4
06_03_0691 + 23552437-23552914,23555168-23555953,23556045-235561... 28 8.5
05_04_0010 - 17132810-17132935,17133017-17133169,17133202-171332... 28 8.5
05_02_0101 + 6611694-6611834,6612651-6612734,6613035-6613096,661... 28 8.5
04_03_0268 - 13663387-13663505,13663935-13664025,13664788-136648... 28 8.5
02_01_0763 - 5665010-5665202,5665285-5665375,5665460-5666245,566... 28 8.5
>01_07_0289 + 42540059-42541141
Length = 360
Score = 35.1 bits (77), Expect = 0.056
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +1
Query: 490 QSVSCGSFSGTFSTVLFQPLDLVKTRL 570
+SV CG+ +G S L PLD+VKTRL
Sbjct: 254 ESVLCGALAGAISAALTTPLDVVKTRL 280
>03_02_0148 -
5928703-5928931,5929099-5929171,5929288-5929408,
5929907-5929952,5930361-5930571,5930837-5930986,
5931122-5931179,5931285-5931400,5931986-5932091
Length = 369
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 478 SSGVQSVSCGSFSGTFSTVLFQPLDLVKTRLQ 573
SS + + G +G FS L PLD++KTRLQ
Sbjct: 256 SSSFEGLLLGGLAGGFSAYLTTPLDVIKTRLQ 287
>03_02_0489 +
8836306-8836500,8836906-8837082,8837175-8837321,
8837636-8837737,8837824-8837894,8837992-8838059,
8838595-8838836
Length = 333
Score = 33.1 bits (72), Expect = 0.23
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 493 SVSCGSFSGTFSTVLFQPLDLVKTRLQ 573
S++CGS SG S+ + PLDLV+ R+Q
Sbjct: 240 SLACGSLSGIASSTITFPLDLVRRRMQ 266
>02_05_0230 +
27029725-27030871,27030995-27031113,27031225-27031349,
27031491-27031590,27031680-27031757,27032818-27032901,
27033077-27033162,27033869-27034049,27034596-27034646
Length = 656
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 475 LSSGVQSVSCGSFSGTFSTVLFQPLDLVKTRLQ 573
L SG Q++ CG F+G+ + + P D+VKTR+Q
Sbjct: 518 LDSG-QTLFCGGFAGSTAALCTTPFDVVKTRVQ 549
>01_07_0083 +
40970890-40971015,40971886-40971994,40972679-40972790,
40972944-40973100,40973609-40973761,40974143-40974292,
40974803-40974999,40975446-40975473
Length = 343
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +1
Query: 457 NGHRD*LSSGVQSVSCGSFSGTFSTVLFQPLDLVKTRLQ 573
+G D S Q CG +GTFS PLD+VK R Q
Sbjct: 231 SGSEDDSVSSFQLFLCGFAAGTFSKAACHPLDVVKKRFQ 269
>01_05_0410 +
21914995-21915168,21915268-21915353,21915446-21915656,
21915869-21915998,21916740-21916924,21917014-21917145,
21917329-21917433
Length = 340
Score = 31.9 bits (69), Expect = 0.52
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 481 SGVQSVSCGSFSGTFSTVLFQPLDLVKTRLQNPN 582
S V +SCG+ +G F L PLD+V+ ++Q N
Sbjct: 232 SVVLKLSCGALAGLFGQTLTYPLDVVRRQMQVQN 265
>01_01_0282 -
2349336-2349583,2349719-2349786,2349880-2349950,
2350022-2350123,2350309-2350449,2350540-2350716,
2352228-2352338
Length = 305
Score = 31.1 bits (67), Expect = 0.91
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +1
Query: 442 LKVHQNGHRD*LSSGVQSVSCGSFSGTFSTVLFQPLDLVKTRLQ 573
L+ H R S V S+ GS SG S+ PLDLVK R+Q
Sbjct: 193 LRSHWQMERPQDSPAVVSLFSGSLSGIASSTATFPLDLVKRRMQ 236
>05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717
Length = 415
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1
Query: 493 SVSCGSFSGTFSTVLFQPLDLVKTRL 570
S+ G+F+G ST+ PL+L+KTRL
Sbjct: 231 SLVAGAFAGVSSTLCTYPLELIKTRL 256
>03_01_0644 -
4719954-4720022,4720445-4720912,4721009-4721312,
4722321-4722745
Length = 421
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 505 GSFSGTFSTVLFQPLDLVKTRLQNPNHHVMGG 600
G+ +G +T+L P+D ++TR+ P +GG
Sbjct: 227 GAAAGVTATILCIPMDTIRTRMVAPGGEALGG 258
>01_03_0118 -
12688137-12688162,12688236-12688395,12689442-12689583,
12689680-12689876,12690374-12690755,12692317-12692399
Length = 329
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 487 VQSVSCGSFSGTFSTVLFQPLDLVKTRLQNPNHHVMG 597
V + G+ +G S+++ P+D +KTRLQ +++ G
Sbjct: 240 VVQATAGTIAGACSSIITTPIDTIKTRLQVMDNYGRG 276
>11_04_0086 +
13362788-13362937,13363887-13363970,13364233-13364294,
13365146-13365507,13365928-13366142,13366236-13366292
Length = 309
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 487 VQSVSCGSFSGTFSTVLFQPLDLVKTRLQ 573
V+ + G SG +T + QP+D+VK R+Q
Sbjct: 26 VKPFANGGASGMLATCVIQPIDMVKVRIQ 54
>03_02_0646 + 10141967-10142476,10143721-10144254
Length = 347
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 499 SCGSFSGTFSTVLFQPLDLVKTRLQ 573
+ GS G QP+D++KTRLQ
Sbjct: 44 AAGSVGGVMEACCLQPIDVIKTRLQ 68
>01_06_0447 +
29452194-29452361,29453232-29453317,29453403-29453610,
29454252-29454381,29454561-29454745,29454858-29454989,
29455747-29455851
Length = 337
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 496 VSCGSFSGTFSTVLFQPLDLVKTRLQ 573
+SCG+ +G F L PLD+V+ ++Q
Sbjct: 234 LSCGAAAGLFGQTLTYPLDVVRRQMQ 259
>01_05_0099 -
18098169-18098390,18098878-18098972,18099063-18099131,
18099277-18099352,18101412-18101524,18104137-18104185,
18104540-18104572,18105446-18105552,18106892-18106990,
18107122-18107203
Length = 314
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 457 NGHRD*LSSGVQSVSCGSFSGTFSTVLFQPLDLVKTRLQ 573
NG R + + G +G S + PLD++KTRLQ
Sbjct: 8 NGARVMVREAACNAIAGGSAGVISATVLCPLDVIKTRLQ 46
>05_07_0283 -
28937027-28937110,28937211-28937549,28937641-28937754,
28937843-28937955,28939050-28939087,28939315-28939478,
28939746-28939794,28940986-28941152
Length = 355
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 487 VQSVSCGSFSGTFSTVLFQPLDLVKTRLQ 573
V + CG+ +GT + PLD+++ R+Q
Sbjct: 250 VTRLGCGAVAGTIGQTVAYPLDVIRRRMQ 278
>10_08_0041 - 14374684-14377339,14377371-14378233
Length = 1172
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 277 GLIRYSKAWSFSAQRRSKNTC 215
G++ YS+AW F R+ N C
Sbjct: 1004 GMLAYSRAWKFCISSRADNAC 1024
>06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627
Length = 419
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 493 SVSCGSFSGTFSTVLFQPLDLVKTRL 570
S+ G+ +G ST+ PL+L+KTRL
Sbjct: 233 SLIAGALAGVSSTLCTYPLELIKTRL 258
>06_03_0691 +
23552437-23552914,23555168-23555953,23556045-23556135,
23556214-23556406
Length = 515
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 496 VSCGSFSGTFSTVLFQPLDLVKTRLQ 573
+ CG+ SG PL +++TRLQ
Sbjct: 429 LGCGTVSGALGATCVYPLQVIRTRLQ 454
>05_04_0010 -
17132810-17132935,17133017-17133169,17133202-17133263,
17133384-17133435,17133794-17133883,17134075-17134170,
17134258-17134311,17134575-17134665,17134996-17135072,
17135770-17135852,17136057-17136111
Length = 312
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 505 GSFSGTFSTVLFQPLDLVKTRLQNPNH 585
G+F+G + + PLD++KTRL N+
Sbjct: 196 GAFAGAITGAITTPLDVMKTRLMVQNN 222
>05_02_0101 +
6611694-6611834,6612651-6612734,6613035-6613096,
6613304-6613322
Length = 101
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 505 GSFSGTFSTVLFQPLDLVKTRLQ 573
G SG +T + QP+D+VK ++Q
Sbjct: 29 GGASGMLATCVIQPIDMVKVKIQ 51
>04_03_0268 -
13663387-13663505,13663935-13664025,13664788-13664874,
13665849-13665904,13666788-13666841,13667413-13667523,
13668293-13668419
Length = 214
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -1
Query: 586 DDSDSANESSLNPTAGRAQC*MFQKTTR--KKRFEHRMIVSHD 464
D D E + PT+ +A+ +T K R H MIV+HD
Sbjct: 14 DAEDDREEGAEPPTSSKAEAAAVTSSTEIDKIRLNHTMIVNHD 56
>02_01_0763 -
5665010-5665202,5665285-5665375,5665460-5666245,
5667745-5668225
Length = 516
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 496 VSCGSFSGTFSTVLFQPLDLVKTRLQ 573
+ CG+ SG PL +++TRLQ
Sbjct: 430 LGCGTVSGALGATCVYPLQVIRTRLQ 455
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,916,436
Number of Sequences: 37544
Number of extensions: 338187
Number of successful extensions: 725
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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