Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0722
         (715 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    24   5.4  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    24   5.4  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   7.2  

>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 349 LPLALQFRIL*IWYLLQRY 405
           +PL  +FR L +W++L+ Y
Sbjct: 355 IPLGRRFRALKLWFVLRLY 373


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 349 LPLALQFRIL*IWYLLQRY 405
           +PL  +FR L +W++L+ Y
Sbjct: 386 IPLGRRFRALKLWFVLRLY 404


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
 Frame = -2

Query: 126 ISKLIWGQKITINEFIHQGL----YHLRRKI-KCAIVVFRNSNDTCA 1
           +   IW   +T+ EF+ +GL     H R +    A+   R+S+  C+
Sbjct: 316 LQSTIWPVSLTVREFVDRGLPKQRIHERARFDPSALTSHRSSSANCS 362


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,773
Number of Sequences: 2352
Number of extensions: 13510
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)