Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0722
         (715 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81577-1|CAB04651.3|  289|Caenorhabditis elegans Hypothetical pr...    32   0.47 
Z68882-2|CAA93110.1|  306|Caenorhabditis elegans Hypothetical pr...    32   0.47 
CU457741-10|CAM36351.1|  313|Caenorhabditis elegans Hypothetical...    30   1.9  
AF003384-5|AAB54239.2|  324|Caenorhabditis elegans Uncoupling pr...    30   1.9  
Z68160-3|CAA92291.1|  269|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U00052-8|AAK21421.2|  707|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z46787-1|CAA86739.2|  360|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U80836-10|AAB37890.2|  306|Caenorhabditis elegans Hypothetical p...    29   4.4  
Z80216-2|CAB02279.2|  239|Caenorhabditis elegans Hypothetical pr...    28   5.8  
U58750-4|AAB00644.1|  309|Caenorhabditis elegans Hypothetical pr...    28   5.8  
U21310-1|AAA62519.1|  997|Caenorhabditis elegans Hypothetical pr...    28   5.8  
U58754-8|AAK72082.1|  325|Caenorhabditis elegans Serpentine rece...    28   7.6  

>Z81577-1|CAB04651.3|  289|Caenorhabditis elegans Hypothetical
           protein R11.1 protein.
          Length = 289

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 475 LSSGVQSVSCGSFSGTFSTVLFQPLDLVKTRLQ 573
           L  G + ++ G  +G     L  PLD+VKTRLQ
Sbjct: 4   LKEGGRQITAGGSAGLVEVCLMYPLDVVKTRLQ 36


>Z68882-2|CAA93110.1|  306|Caenorhabditis elegans Hypothetical
           protein C47E12.2 protein.
          Length = 306

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 475 LSSGVQSVSCGSFSGTFSTVLFQPLDLVKTRLQ-NPNHHVMGGY 603
           LS  V+++  G  +G  S  +  PLD ++TRL  + NHH    Y
Sbjct: 123 LSYSVRTLVSGGLAGCSSLCIVYPLDFIRTRLSADINHHTKREY 166


>CU457741-10|CAM36351.1|  313|Caenorhabditis elegans Hypothetical
           protein C42C1.10 protein.
          Length = 313

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +1

Query: 499 SCGSFSGTFSTVLFQPLDLVKTRL--QNPNHHVMGG 600
           +CG+ SG  +     PLD+++TRL  Q   H V  G
Sbjct: 124 ACGALSGCLAMTAAMPLDVIRTRLVAQKAGHAVYTG 159



 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +1

Query: 505 GSFSGTFSTVLFQPLDLVKTRLQNPNHHVMGGYSQRXNSTRG 630
           G+ +GT +  +  PLD+V+ RLQ  N     G+ +  N ++G
Sbjct: 219 GAMAGTVAKTVLYPLDMVRHRLQ-MNGFERAGFGKTSNYSQG 259


>AF003384-5|AAB54239.2|  324|Caenorhabditis elegans Uncoupling
           protein (mitochondrialsubstrate carrier) protein 4
           protein.
          Length = 324

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 490 QSVSCGSFSGTFSTVLFQPLDLVKTRLQ 573
           +S+ CG+FSG  +     P DLVK ++Q
Sbjct: 121 KSMLCGAFSGLIAQFAASPTDLVKVQMQ 148


>Z68160-3|CAA92291.1|  269|Caenorhabditis elegans Hypothetical
           protein D1046.3 protein.
          Length = 269

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 481 SGVQSVSCGSFSGTFSTVLFQPLDLVKTRL 570
           S ++  +CGS +G  +  L  PLD+ KTR+
Sbjct: 180 SPLEGAACGSVAGFIAAGLTTPLDVAKTRI 209


>U00052-8|AAK21421.2|  707|Caenorhabditis elegans Hypothetical
           protein K02F3.2 protein.
          Length = 707

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 505 GSFSGTFSTVLFQPLDLVKTRLQN 576
           GS +G        P+DLVKTR+QN
Sbjct: 376 GSVAGACGATAVYPIDLVKTRMQN 399


>Z46787-1|CAA86739.2|  360|Caenorhabditis elegans Hypothetical
           protein C16C10.1 protein.
          Length = 360

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 475 LSSGVQSVSCGSFSGTFSTVLFQ-PLDLVKTRLQ 573
           LS GV      S SG   T LF  PLD+VK RLQ
Sbjct: 32  LSVGVLQQVSASSSGAIVTSLFMTPLDVVKIRLQ 65


>U80836-10|AAB37890.2|  306|Caenorhabditis elegans Hypothetical
           protein B0432.4 protein.
          Length = 306

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +1

Query: 505 GSFSGTFSTVLFQPLDLVKTRLQ 573
           G  +G  +T++ QPLDLVK R+Q
Sbjct: 16  GGTAGMGATLVVQPLDLVKNRMQ 38


>Z80216-2|CAB02279.2|  239|Caenorhabditis elegans Hypothetical
           protein F10G8.2 protein.
          Length = 239

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -1

Query: 502 KKRFEHRMIVSHDVHSDALSILLGFTKYSSSSNIFGVNTKFI 377
           K++ +H +I  H VH+ +  +L+  TKYS SS +   N   I
Sbjct: 98  KEQKKHHVI--HVVHNFSSKLLVNTTKYSRSSTVMRFNLHLI 137


>U58750-4|AAB00644.1|  309|Caenorhabditis elegans Hypothetical
           protein F55G1.5 protein.
          Length = 309

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +1

Query: 505 GSFSGTFSTVLFQPLDLVKTRLQN 576
           G  SG        P+DLVKTRLQN
Sbjct: 27  GGISGIVGVSCVFPMDLVKTRLQN 50


>U21310-1|AAA62519.1|  997|Caenorhabditis elegans Hypothetical
           protein F40H6.2 protein.
          Length = 997

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 560 FTKSNGWKSTVLNVPENDPQETL*TPDD 477
           F ++ G+  T + VPENDP  T+   DD
Sbjct: 102 FVRTLGYAFTAITVPENDPIYTIIVYDD 129


>U58754-8|AAK72082.1|  325|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 13 protein.
          Length = 325

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +3

Query: 99  FSVPKLISKLKSCNYRQRSRRFIL-YLFKSFTIIPGRSSL 215
           F +  L+S L S  +    RRFI+ Y FK+  + PG SSL
Sbjct: 274 FLLIPLLSPLASFIFVTPYRRFIMHYFFKTTRVEPGESSL 313


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,056,323
Number of Sequences: 27780
Number of extensions: 320394
Number of successful extensions: 669
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)