Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0721
         (658 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    25   0.41 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.2  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   8.9  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +3

Query: 378 CPEAPQPREMI-DLEATFEKLENELREVNQNAEALKRNYLELTELNIF 518
           C EA   +++I  ++   +K E+E  EV  +A  L +N LE+T    F
Sbjct: 314 CQEANSTKKLIVKIKIDIDK-EDERNEVISSALKLSQNELEITACKFF 360


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -1

Query: 580 DLFLLPRRIRHLIEENLSLPQNMFNSVNS 494
           ++ LL   +RH++  +   PQN  N V+S
Sbjct: 632 EITLLVATVRHVMAPSTCQPQNPDNDVHS 660


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -1

Query: 571 LLPRRIRHLIEENLSLPQNMFNSV 500
           L+P  + H+  +NL L +N +++V
Sbjct: 158 LVPTPVTHIFLQNLILKENTYDAV 181


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 408 SSPWVEAPRDTLRGSPAW 355
           SSP + +P  T  GSP +
Sbjct: 68  SSPRISSPSSTKSGSPGF 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,935
Number of Sequences: 336
Number of extensions: 2139
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)