Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0721
(658 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1250 + 35726115-35726255,35727435-35727479,35728570-357286... 66 2e-11
10_02_0114 + 5431578-5431724,5432753-5432797,5433572-5433691,543... 58 6e-09
03_02_0381 + 7951360-7951509,7952125-7952169,7952625-7952744,795... 58 8e-09
08_02_0955 + 22994266-22995630 30 1.4
04_04_1523 - 34148407-34150224 29 3.3
10_08_0558 + 18756797-18756887,18757189-18757262,18759881-187600... 29 4.3
02_01_0224 - 1461924-1462227,1462602-1462798,1463059-1463213,146... 28 5.7
07_03_1492 + 26960876-26960986,26961910-26962074,26962153-269622... 28 7.5
03_06_0642 + 35239658-35240083,35240167-35240238,35240305-352409... 28 7.5
01_01_0536 - 3926450-3928447 28 7.5
09_04_0414 - 17393780-17394826 27 9.9
05_01_0130 + 878323-878640,879017-879181 27 9.9
>01_06_1250 +
35726115-35726255,35727435-35727479,35728570-35728692,
35728804-35728911,35729247-35729360,35729440-35729613,
35729881-35729976,35730165-35730272,35730389-35730496,
35730595-35730743,35731255-35731408,35732487-35732647,
35733739-35733945,35733968-35734025,35734058-35734222,
35734305-35734388,35735670-35735863,35735952-35736011,
35736203-35736407
Length = 817
Score = 66.1 bits (154), Expect = 2e-11
Identities = 34/88 (38%), Positives = 52/88 (59%)
Frame = +3
Query: 252 RNAFQRKFVNEVRRCDEMERKLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFE 431
++ FQR FVN+V+RC EM RKLR+ +I + G+ P P+ ++ +LEA
Sbjct: 52 KSPFQRIFVNQVKRCSEMSRKLRFFNDQINKAGVKSSVRPAMQPDI----DLEELEAKLR 107
Query: 432 KLENELREVNQNAEALKRNYLELTELNI 515
+ EN+L E+N N+E L + Y EL E +
Sbjct: 108 EHENDLLEMNTNSEKLLQTYNELLEFKM 135
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +1
Query: 139 RSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVTP 261
RSE+M QL + +E+A V+ LGELGL+QF+DLN D +P
Sbjct: 14 RSEKMCFVQLIIPAESARLAVTYLGELGLLQFKDLNEDKSP 54
>10_02_0114 +
5431578-5431724,5432753-5432797,5433572-5433691,
5433773-5433880,5434900-5435073,5435366-5435503,
5435879-5435986,5436131-5436238,5436340-5436488,
5437594-5437747,5437980-5438140,5438221-5438427,
5438575-5438758,5438846-5438929,5439023-5439222,
5439314-5439373,5439461-5439665
Length = 783
Score = 58.0 bits (134), Expect = 6e-09
Identities = 32/88 (36%), Positives = 49/88 (55%)
Frame = +3
Query: 252 RNAFQRKFVNEVRRCDEMERKLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFE 431
++ FQR + ++++RC EM RKLR+ +++ + I + E+ DLE
Sbjct: 54 KSPFQRTYASQIKRCGEMARKLRFFREQMSKAAIAT-----STQFSGTSLEIDDLEVKLG 108
Query: 432 KLENELREVNQNAEALKRNYLELTELNI 515
+LE EL EVN N + L+R Y EL E NI
Sbjct: 109 ELEVELTEVNANNDKLQRTYNELVEYNI 136
Score = 50.8 bits (116), Expect = 9e-07
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +1
Query: 133 LFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVTP 261
L RSE M L Q+ + +E+A+ VS LG+LGL+QF+DLN D +P
Sbjct: 14 LMRSEAMQLVQVIIPAESAHLAVSYLGDLGLLQFKDLNADKSP 56
>03_02_0381 +
7951360-7951509,7952125-7952169,7952625-7952744,
7952823-7952930,7953256-7953363,7953635-7953808,
7954054-7954191,7954643-7954750,7954866-7954973,
7955086-7955234,7955816-7955969,7956143-7956303,
7956391-7956597,7956703-7956886,7956974-7957057,
7957146-7957345,7957476-7957535,7957631-7957835
Length = 820
Score = 57.6 bits (133), Expect = 8e-09
Identities = 33/85 (38%), Positives = 48/85 (56%)
Frame = +3
Query: 252 RNAFQRKFVNEVRRCDEMERKLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFE 431
++ FQR + +++RC EM RKLR+ ++++ + GI + E + DLE
Sbjct: 55 KSPFQRTYAAQIKRCGEMARKLRFFKEQMSKAGI---STSAQLTEI--SLDFDDLEIKLG 109
Query: 432 KLENELREVNQNAEALKRNYLELTE 506
+LE EL EVN N E LKR Y EL E
Sbjct: 110 ELEAELAEVNANNEKLKRTYNELLE 134
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +1
Query: 133 LFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVTP 261
L RSE M L Q+ + +E+A+ VS LGELGL+Q +DLN D +P
Sbjct: 15 LMRSEAMQLVQVIIPTESAHLTVSYLGELGLLQLKDLNADKSP 57
>08_02_0955 + 22994266-22995630
Length = 454
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -2
Query: 486 SS*ELQRSG*PLAAHSQAFRRSLQDRSSPWVEAPRDTLRGSPAW 355
SS + S P AA SQ+ RRS + RSSP +P R W
Sbjct: 150 SSRPMDASRRPAAASSQSQRRSKRPRSSPTQHSPEQHKRPPRVW 193
>04_04_1523 - 34148407-34150224
Length = 605
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 151 MTLCQLFLQSEAAYA-CVSELGELGLVQFRDLNPD 252
+ LC +FL+ AA C++E+GE+ +FR L +
Sbjct: 393 LVLCTIFLKEAAASGLCLAEIGEMMTREFRGLEEE 427
>10_08_0558 +
18756797-18756887,18757189-18757262,18759881-18760069,
18760190-18760309,18760457-18760521,18760684-18760828,
18761304-18763337,18763904-18764025,18764127-18764309,
18764635-18764690,18765086-18765141
Length = 1044
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 411 DLEATFEKLENELREVNQNAEA 476
DLEA E LENEL+E ++ EA
Sbjct: 604 DLEANVESLENELQEQSKRLEA 625
>02_01_0224 -
1461924-1462227,1462602-1462798,1463059-1463213,
1464101-1464207,1464289-1464375,1465332-1465414,
1465959-1466027,1466332-1466658,1466744-1466957,
1467170-1467267,1467516-1467554,1467672-1468160
Length = 722
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 309 RKLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLE-NELREVN 461
R++ L++E+ R M ++ EC E + R DLE ++ E LR N
Sbjct: 157 REVERLKRELNRVSKQMNDVKNECSELKKDRTRKDLEIKAKEAEIQSLRRAN 208
>07_03_1492 +
26960876-26960986,26961910-26962074,26962153-26962271,
26962559-26962633,26963063-26963156,26963239-26963298,
26963474-26963539,26963622-26963720,26964027-26964035
Length = 265
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 465 NAEALKRNYLELTELNIF*GRLKFS 539
NA+ +KR +E++ LNI G LKFS
Sbjct: 241 NAQIMKRYIVEVSYLNIMIGLLKFS 265
>03_06_0642 +
35239658-35240083,35240167-35240238,35240305-35240919,
35241253-35241435,35241604-35241663,35241733-35241936,
35242497-35242745,35243609-35243707,35243760-35243858,
35244463-35244480,35244668-35244862,35244981-35245073,
35245265-35245531,35245884-35246102
Length = 932
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 375 ECPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNYLELTELNIF 518
+ PE + R++ID F +LEN + V++ A+ R +LE L F
Sbjct: 692 DVPEMDRERKLIDGGLDFSRLEN-ITLVHREGNAVIRRHLESLPLESF 738
>01_01_0536 - 3926450-3928447
Length = 665
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 202 SELGELGLVQFRDLNPDVTPSNVSSSMRYVAAMRW 306
SE+GEL + +L+PD + + + S Y + RW
Sbjct: 478 SEIGELAAERLLELDPDNSTAYILLSNMYAKSNRW 512
>09_04_0414 - 17393780-17394826
Length = 348
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -2
Query: 423 SLQDRSSPWVEAPRDTLRGSPAWGSRHV*SPSPGNG 316
S QDR SPW A TLR S W + +PG G
Sbjct: 287 SEQDRLSPWQRAYYATLRSS-GWPGQAELYETPGEG 321
>05_01_0130 + 878323-878640,879017-879181
Length = 160
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 398 GLRRLGTLSGDLQHGDPVTSD 336
G+R+L + S QH DP TSD
Sbjct: 35 GMRQLKSASSSSQHDDPATSD 55
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,129,223
Number of Sequences: 37544
Number of extensions: 293797
Number of successful extensions: 1051
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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