Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0721
(658 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48843| Best HMM Match : V_ATPase_I (HMM E-Value=0) 87 2e-17
SB_35254| Best HMM Match : Vicilin_N (HMM E-Value=0.066) 34 0.089
SB_8511| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.089
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 32 0.47
SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34) 31 1.1
SB_34355| Best HMM Match : DUF827 (HMM E-Value=0.011) 30 1.4
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_15616| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_21914| Best HMM Match : Exo_endo_phos (HMM E-Value=6e-05) 29 2.5
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_47174| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_9496| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_49747| Best HMM Match : RVT_1 (HMM E-Value=2.1e-36) 29 4.4
SB_2719| Best HMM Match : CUB (HMM E-Value=1.9e-24) 29 4.4
SB_53979| Best HMM Match : TetR_C (HMM E-Value=5.3) 28 5.8
SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_25425| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_39617| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38) 28 5.8
SB_29623| Best HMM Match : GM_CSF (HMM E-Value=5) 28 5.8
SB_23788| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38) 28 5.8
SB_19517| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_17897| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-14) 28 5.8
SB_9562| Best HMM Match : TetR_C (HMM E-Value=4) 28 5.8
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 28 7.7
SB_7222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_45147| Best HMM Match : zf-CCHC (HMM E-Value=0.0051) 28 7.7
>SB_48843| Best HMM Match : V_ATPase_I (HMM E-Value=0)
Length = 1128
Score = 86.6 bits (205), Expect = 2e-17
Identities = 42/76 (55%), Positives = 56/76 (73%)
Frame = +3
Query: 255 NAFQRKFVNEVRRCDEMERKLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEK 434
NAFQRKFVNEVRRC+EMERKLR+L+KEI + I M++ GE EAP PREMIDLEA
Sbjct: 111 NAFQRKFVNEVRRCEEMERKLRFLQKEIEKAEIAMVD-TGESSEAPHPREMIDLEAEQHV 169
Query: 435 LENELREVNQNAEALK 482
+ +++E + + ++
Sbjct: 170 HQQQIQEPGRTDDTVQ 185
>SB_35254| Best HMM Match : Vicilin_N (HMM E-Value=0.066)
Length = 909
Score = 34.3 bits (75), Expect = 0.089
Identities = 23/91 (25%), Positives = 42/91 (46%)
Frame = +3
Query: 237 RFES*RNAFQRKFVNEVRRCDEMERKLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDL 416
+ E R+ F+++ E R+ +EM +L K + + E E + E+ DL
Sbjct: 252 KLEEARHEFEKQIQEEGRQLEEMRAELERQRKLHAMEAQNVEEARQRVSELTRKHEIADL 311
Query: 417 EATFEKLENELREVNQNAEALKRNYLELTEL 509
E T + E + RE+ A+ +K ++L L
Sbjct: 312 ERTSREKELK-REIENRAQEIKEKAMQLETL 341
>SB_8511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 883
Score = 34.3 bits (75), Expect = 0.089
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +3
Query: 315 LRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLEN-ELREVNQNAEALKRNY 491
L+Y + +R G+ +EI GE P A PR+++DL +E++ N +L N++ + +Y
Sbjct: 411 LKYKVQFYKRIGLQAIEIYGENPIARNPRKVVDL---YEEMTNLDLTPDNRSKSYIIMSY 467
Query: 492 LELTEL 509
L L ++
Sbjct: 468 LALGKI 473
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 31.9 bits (69), Expect = 0.47
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Frame = +3
Query: 282 EVRRCDEMERKLRYLEKEIRRDG--IPMLEIPGECPEAPQ-----PREMIDLEATFEKLE 440
+V C+E+ER L K++ + + L I + P A +E DL++ ++L+
Sbjct: 4237 KVNECEELERTTSDLSKKLSQAELIVQQLSIESDAPAAQTLVQQLQQEKDDLKSKLDQLK 4296
Query: 441 NELREVNQNA-EALKRNYLELTEL 509
L++ NA EAL+R EL +L
Sbjct: 4297 KTLQKSEANAEEALQRRTDELEKL 4320
>SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34)
Length = 837
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 264 QRKFVNEVRRCDEMERKLRYLEKEIRRDGI-PMLEIPGECPEAPQPREMIDLEA 422
Q K + +C+ M+ L+YL I +DGI P + AP P+++ L A
Sbjct: 277 QEKMXAQREKCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRA 330
>SB_34355| Best HMM Match : DUF827 (HMM E-Value=0.011)
Length = 501
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +3
Query: 288 RRCDEMERKLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEAT-----FEKLENELR 452
RR ++E++L+ LE+E+ + + E E+ E I+ E T + LENEL
Sbjct: 191 RRQGKVEQRLKSLEQELEQSQAHYKALKKELEESNAKCEAIERELTNYRQQCKHLENELD 250
Query: 453 EVNQNAEALK 482
V E+LK
Sbjct: 251 RVKVKCESLK 260
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 411 DLEATFEKLENELREVNQNAEALKRNYLELTE 506
D + + LENELREV Q E +++ Y + E
Sbjct: 556 DDKEQLDMLENELREVKQKLEGVEKKYQQYRE 587
>SB_15616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = -3
Query: 482 LKSFSVLVNLSQLILKLFEGRFKIDHLPGLRRLGTLSGDLQHGDPVTSDLLLQVTELTFH 303
LK F+ LS ++ +L+ K HLPGL + + + P + + ++ LTFH
Sbjct: 112 LKMFAF--ELSPIVAELYNTSLKEGHLPGLLKSANVRPLPKLSPPKSIETGIRPISLTFH 169
Query: 302 LIAA 291
L A
Sbjct: 170 LAKA 173
>SB_21914| Best HMM Match : Exo_endo_phos (HMM E-Value=6e-05)
Length = 502
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = -3
Query: 482 LKSFSVLVNLSQLILKLFEGRFKIDHLPGLRRLGTLSGDLQHGDPVTSDLLLQVTELTFH 303
LK F+ LS ++ +L+ K HLPGL + + + P + + ++ LTFH
Sbjct: 355 LKMFAF--ELSPIVAELYNTSLKEGHLPGLLKSANVRPLPKLSPPKSIETGIRPISLTFH 412
Query: 302 LIAA 291
L A
Sbjct: 413 LAKA 416
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 491 PRVNRIKHILRKTQVFFDEMADPSREEEQVTLLGEEGLMAGKASAQAGVSSR 646
P V++ + +LR TQ+ + + D R E QVT + + AS + G+ R
Sbjct: 421 PLVSKDRRVLRLTQLLLNRLRDNLRWETQVTKVTKAPPGEPGASGRPGIPGR 472
>SB_47174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1198
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +3
Query: 291 RCDEMERKLRYLEKEIRRDGI-PMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQN 467
+CD ++KL+YL I +GI P E P PR + +L F + N R ++
Sbjct: 413 KCDFAKKKLQYLGHVITPEGISPSGSKVKAVSEYPPPRNLKELRC-FLGMINFYRRFIKD 471
Query: 468 AEALKRNYLELTELNI 515
A+ R +LT+ ++
Sbjct: 472 FAAIARPLNDLTKKSV 487
>SB_9496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2309
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 291 RCDEMERKLRYLEKEIRRDGI-PMLEIPGECPEAPQPREMIDLEATFEKLENE 446
+C+ M+ L+YL I +DGI P + AP P+++ L T +E
Sbjct: 536 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRLTTSSSTSE 588
>SB_49747| Best HMM Match : RVT_1 (HMM E-Value=2.1e-36)
Length = 877
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 291 RCDEMERKLRYLEKEIRRDGI-PMLEIPGECPEAPQPREMIDLEATFEKLENE 446
+C+ M+ L+YL I +DGI P + AP P+++ L T +E
Sbjct: 319 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRLTTSSSTSE 371
>SB_2719| Best HMM Match : CUB (HMM E-Value=1.9e-24)
Length = 614
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 258 AFQRKFVNEVRRCDEMERKLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKL 437
+F+RK V + + + +L E+E+ +D E P +A P DLE L
Sbjct: 526 SFERKLVGMLEQLQKEGEELEKAEREMEKDA-EAAEAP---KQAESPENFPDLEEFLLNL 581
Query: 438 ENELRE 455
+ EL E
Sbjct: 582 DRELEE 587
>SB_53979| Best HMM Match : TetR_C (HMM E-Value=5.3)
Length = 327
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 291 RCDEMERKLRYLEKEIRRDGI-PMLEIPGECPEAPQPREMIDLEA 422
+C+ M+ L+YL I +DGI P + AP P+++ L A
Sbjct: 50 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRA 94
>SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 918
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 291 RCDEMERKLRYLEKEIRRDGI-PMLEIPGECPEAPQPREMIDLEA 422
+C+ M+ L+YL I +DGI P + AP P+++ L A
Sbjct: 463 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRA 507
>SB_25425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 291 RCDEMERKLRYLEKEIRRDGI-PMLEIPGECPEAPQPREMIDLEA 422
+C+ M+ L+YL I +DGI P + AP P+++ L A
Sbjct: 62 KCEFMQPSLKYLGHVIDKDGIHPASDKVEAIKTAPSPQDVTQLRA 106
>SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +3
Query: 288 RRCDEMERKLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQN 467
R+ E ER L K++ DG + + + E + REM+DL+ T E+L E +
Sbjct: 856 RKTSEPERPTSQLNKQL--DGAKIEALQKQLSE--KNREMLDLQQTCERLRTEKLALVPQ 911
Query: 468 AEALKRNYLELTELNI 515
A +L E N+
Sbjct: 912 ANQTLPQAAQLEEENM 927
>SB_39617| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38)
Length = 1084
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 291 RCDEMERKLRYLEKEIRRDGI-PMLEIPGECPEAPQPREMIDLEA 422
+C+ M+ L+YL I +DGI P + AP P+++ L A
Sbjct: 608 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRA 652
>SB_29623| Best HMM Match : GM_CSF (HMM E-Value=5)
Length = 296
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 291 RCDEMERKLRYLEKEIRRDGI-PMLEIPGECPEAPQPREMIDLEA 422
+C+ M+ L+YL I +DGI P + AP P+++ L A
Sbjct: 29 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRA 73
>SB_23788| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38)
Length = 1122
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 291 RCDEMERKLRYLEKEIRRDGI-PMLEIPGECPEAPQPREMIDLEA 422
+C+ M+ L+YL I +DGI P + AP P+++ L A
Sbjct: 642 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRA 686
>SB_19517| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1696
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 291 RCDEMERKLRYLEKEIRRDGI-PMLEIPGECPEAPQPREMIDLEA 422
+C+ M+ L+YL I +DGI P + AP P+++ L A
Sbjct: 685 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRA 729
>SB_17897| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-14)
Length = 1217
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 291 RCDEMERKLRYLEKEIRRDGI-PMLEIPGECPEAPQPREMIDLEA 422
+C+ M+ L+YL I +DGI P + AP P+++ L A
Sbjct: 415 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRA 459
>SB_9562| Best HMM Match : TetR_C (HMM E-Value=4)
Length = 242
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 291 RCDEMERKLRYLEKEIRRDGI-PMLEIPGECPEAPQPREMIDLEA 422
+C+ M+ L+YL I +DGI P + AP P+++ L A
Sbjct: 80 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRA 124
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 27.9 bits (59), Expect = 7.7
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Frame = +3
Query: 225 SSVPRFES*RNAFQRKFVNEVRRCD-EMERKLRYLEKEIRRDGIPMLEIPGECPEAPQPR 401
+ + + S +N+ + ++V+++ R E+E + +I M E C
Sbjct: 1060 TKLKKLTSEKNSIKAEYVSKIARLQSELEESNQRSRLDIENVRTEM-EKQRLCEVEKVRN 1118
Query: 402 EMI-DLEATFEKLENELREVNQNAEALKRNY-LELTELNI 515
EM+ DLE T KL+ ++E ++ L +NY ++ +L I
Sbjct: 1119 EMLSDLEETRAKLQRIVKECDERISILTQNYEAQILQLTI 1158
>SB_7222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 27.9 bits (59), Expect = 7.7
Identities = 8/31 (25%), Positives = 21/31 (67%)
Frame = +3
Query: 399 REMIDLEATFEKLENELREVNQNAEALKRNY 491
+E++DL+ T + L+ +++ +N ++R+Y
Sbjct: 238 QEILDLQTTVDTLQEQIKHLNDEKNDIRRSY 268
>SB_45147| Best HMM Match : zf-CCHC (HMM E-Value=0.0051)
Length = 522
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 291 RCDEMERKLRYLEKEIRRDGI-PMLEIPGECPEAPQPREMIDLEA 422
+C+ M+ L+YL I +DGI P + AP P+++ L A
Sbjct: 326 KCEFMQPSLKYLGHVIDKDGIHPASDKLETIKTAPSPQDVTQLRA 370
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,612,511
Number of Sequences: 59808
Number of extensions: 304911
Number of successful extensions: 1095
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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