Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0717
         (735 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    26   0.36 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.6  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    23   2.6  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   4.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   5.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   5.9  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = -3

Query: 406 PEYPTWAKLEVDQSQFRS*ISAPSLALWSRTFCPVPKLGRSHRPASAVSRQAI 248
           P Y TW+ ++   +     + +P++  WS T  P P    S +P  + S   I
Sbjct: 302 PTYSTWSTVQTPTT-----VMSPTINCWSLTSSPPPPYQISAQPTPSQSPNQI 349


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -1

Query: 255 RPLISFGSTITMLASLPSYAISSNCALRSWLSPYLKLFS 139
           R +I  G  I M     S A+   C L   LS  ++LF+
Sbjct: 831 RYIILNGRLIKMETKAQSVALGKICTLHHHLSKLIRLFN 869


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 579 PVPSFDADSAIRSSNLSPTES 641
           P+P   A +A  +SN SP++S
Sbjct: 201 PIPQRTASTASSASNYSPSQS 221


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/46 (21%), Positives = 26/46 (56%)
 Frame = +1

Query: 337 TVPKFKIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDEPLYVS 474
           T+ +  +++   +  +LP+  ++A  + +N   T++ D+D  L V+
Sbjct: 13  TMARTPLKSSFSISSILPETALEAPKSPENHPETELSDSDCDLDVT 58


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 505 NGKAPKQPPPQQLGI 549
           NG    QPPP  +GI
Sbjct: 130 NGDPLSQPPPAHMGI 144


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 505 NGKAPKQPPPQQLGI 549
           NG    QPPP  +GI
Sbjct: 22  NGDPLSQPPPAHMGI 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,853
Number of Sequences: 336
Number of extensions: 3804
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)