Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0717
(735 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 54 9e-08
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 51 1e-06
11_01_0750 - 6315126-6315896,6316371-6316784 46 4e-05
04_04_0619 + 26652923-26653267,26653440-26654273 45 5e-05
01_06_0824 - 32243495-32244319,32244449-32244859 44 1e-04
11_02_0011 - 7337618-7338496,7338596-7338991 44 1e-04
11_01_0767 + 6438648-6438809,6439146-6440000 42 5e-04
11_02_0014 - 7352619-7352918,7353173-7353418 41 9e-04
11_02_0012 - 7346282-7347136,7347234-7347593 39 0.004
04_04_0620 + 26656072-26656417,26656585-26657396 39 0.005
01_01_1152 + 9170628-9171899 39 0.005
11_01_0771 + 6453130-6454488 38 0.006
05_06_0044 - 25150322-25151260 33 0.31
08_01_0867 + 8458570-8459168,8460128-8460313,8462684-8463167 31 1.3
08_02_0190 - 14037655-14038044,14038053-14038436 30 2.2
05_05_0300 + 23932947-23933196,23934022-23934123,23934249-239343... 29 2.9
10_05_0053 + 8602142-8603581 29 3.8
02_01_0389 - 2816878-2817390,2817552-2817670,2817803-2817865,281... 29 3.8
12_01_1048 + 10770461-10770612,10770721-10770730,10771457-107716... 29 5.1
11_06_0528 - 24681630-24681751,24681911-24682025,24682134-246821... 28 6.7
04_03_0430 + 15836839-15836973,15837267-15837359,15838975-15839139 28 6.7
04_03_0420 + 15703479-15703613,15703907-15703999,15705615-15705779 28 6.7
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 28 6.7
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 54.4 bits (125), Expect = 9e-08
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Frame = +2
Query: 8 TRLVLVNALYFKGTWQNQFDSISTMERPFYVDTETTVNIPMMYQENNFKYGESHDLNAQL 187
TRLVL NALYFKG W +FD+ T + F++ +V P M + +Y S+D N ++
Sbjct: 242 TRLVLGNALYFKGAWTEKFDASKTKDGEFHLLDGKSVQAPFM-STSKKQYILSYD-NLKV 299
Query: 188 LEMAY-EGNDA---SMVIVLPNEINGL 256
L++ Y +G D SM I+LP +GL
Sbjct: 300 LKLPYQQGGDKRQFSMYILLPEAQDGL 326
Score = 52.0 bits (119), Expect = 5e-07
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Frame = +2
Query: 8 TRLVLVNALYFKGTWQNQFDSISTMERPFYVDTETTVNIPMMYQENNFKYGESHDLNAQL 187
T+LVL NALYFKG W +FD T + F++ +V P M +Y S+D + ++
Sbjct: 494 TKLVLANALYFKGAWAEKFDVSKTEDGEFHLLDGESVQAPFMSTRKK-QYLSSYD-SLKV 551
Query: 188 LEMAY-EGNDA---SMVIVLPNEINGL 256
L++ Y +G D SM I+LP +GL
Sbjct: 552 LKLPYLQGGDKRQFSMYILLPEAQDGL 578
Score = 38.3 bits (85), Expect = 0.006
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Frame = +1
Query: 340 VPKFKIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDEP--LYVSKAVQKAFIEVNGK 513
+PKFKI + +L LG+ F+ + + LT+++D+ E L+VS K+F+EVN +
Sbjct: 356 LPKFKISFGFEASDLLKSLGLHLPFSSE-ADLTEMVDSPEGKNLFVSSVFHKSFVEVNEE 414
Query: 514 APKQPPPQQLGIAFCSA-----FLTSHQYLPLM 597
+ I SA F+ H +L L+
Sbjct: 415 GTEAAAATAAVITLRSAPIAEDFVADHPFLFLI 447
Score = 31.9 bits (69), Expect = 0.54
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 340 VPKFKIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDND--EPLYVSKAVQKAFIEVN 507
+PKFKI +L LG+ +F + L +++D+ + L+VS K+FIEVN
Sbjct: 608 LPKFKISFGFGASGLLKGLGLPLLFGSEVD-LIEMVDSPGAQNLFVSSVFHKSFIEVN 664
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 50.8 bits (116), Expect = 1e-06
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Frame = +2
Query: 8 TRLVLVNALYFKGTWQNQFDSISTMERPFYVDTETTVNIPMMYQENNFKYGESHDLNAQL 187
TRLVL NALYFKG W +FD+ T + F + +V P M + +Y S+D + ++
Sbjct: 34 TRLVLGNALYFKGAWTEKFDASKTKDGEFRLLDGKSVLAPFM-STSKKQYLSSYD-SLKV 91
Query: 188 LEMAYE-GNDA---SMVIVLPNEINGL 256
L++ Y+ G D SM I+LP +GL
Sbjct: 92 LKLPYQKGRDLRQFSMYILLPEAQDGL 118
Score = 33.9 bits (74), Expect = 0.13
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Frame = +1
Query: 340 VPKFKIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDE--PLYVSKAVQKAFIEVNGK 513
+PKFKI + +L LG+Q F+ + LT ++ + E L+VS K+F++V+ +
Sbjct: 148 LPKFKISFGFEASDLLKILGLQLPFS-SKADLTGMVGSPERHNLFVSSLFHKSFVQVDEE 206
Query: 514 APKQPPPQQLGIAFCSA-----FLTSHQYLPLM 597
+ ++F SA F+ H +L L+
Sbjct: 207 GTEAAAASAAVVSFRSAPVTVDFVADHPFLFLI 239
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 45.6 bits (103), Expect = 4e-05
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Frame = +2
Query: 8 TRLVLVNALYFKGTWQNQFDSISTMERPFYVDTETTVNIPMMYQENNFKYGESHDLNAQL 187
T LVL +ALYF+G W ++ D T E+ FY T+V +P + + + HD N ++
Sbjct: 171 TGLVLGSALYFRGRWLDRDDLRRTTEQKFYCLDGTSVEVPFVEYDRTRLFA-VHD-NFKV 228
Query: 188 LEMAY-EGNDA---SMVIVLPNEINGL 256
+++ Y +G + SM I LP++ +GL
Sbjct: 229 IKLPYKQGKNERKFSMYIFLPDDHDGL 255
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = +1
Query: 328 VRVTVPKFKIETEIDLLQVLPKLGIQAIFNRQN--SGLTKILDNDEPLYVSKAVQKAFIE 501
V ++VP FKI +ID+ L +G++ F R+ S + K D+ PL++S + KA +E
Sbjct: 280 VGISVPNFKISFQIDVKDFLKDMGLELPFLREAEFSDMIKEDDSSGPLFLSDVLHKAVLE 339
Query: 502 VNGK 513
V+ K
Sbjct: 340 VDQK 343
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +2
Query: 8 TRLVLVNALYFKGTWQNQFDSISTMERPFYVDTETTVNIPMMYQENNFKYGESHDLNAQL 187
T+ VL NA++FK TW +F+S T R F+ T V +P + L ++
Sbjct: 148 TKCVLANAMHFKATWGRKFESYDTQRRRFHRQDGTRVTVPFLSDPRTHYAARFDGLGFKV 207
Query: 188 LEMAYE--GNDASM 223
L++ Y+ G+D +
Sbjct: 208 LQLFYKMVGHDGQV 221
Score = 36.7 bits (81), Expect = 0.019
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Frame = +1
Query: 340 VPKFKIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDN----DEPLYVSKAVQKAFIEVN 507
VPKFK +E+D L KLG+ A F+ + L+++ + E LYVS QK +EV+
Sbjct: 271 VPKFKFSSELDARGALAKLGLGAPFDPLAADLSRMAVSVNTPPERLYVSAMRQKCAVEVD 330
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 44.4 bits (100), Expect = 1e-04
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Frame = +2
Query: 8 TRLVLVNALYFKGTWQNQFDSISTMERPFYVDTETTVNIPMMYQENNFKYGESHDLNAQL 187
T VL NALYFKG W+++FD+ ST + FY+ V+ P M ++Y ++
Sbjct: 170 TPAVLGNALYFKGDWESKFDARSTSDDVFYLPDGGHVSAPFM-SSGKWQYIACR-AGYKV 227
Query: 188 LEMAY------EGNDA----SMVIVLPNEINGLTGYCR 271
L + Y G D SM I LP+E +GL R
Sbjct: 228 LRLPYARGGRGRGRDTGRLFSMYIYLPDERHGLPDMLR 265
Score = 35.1 bits (77), Expect = 0.058
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Frame = +1
Query: 226 YRAAERN*WPDGILQKLADGYDLTSELDKMFSTKVRV---TVPKFKIETEIDLLQVLPKL 396
Y ER+ PD +L+KL E + KV V VP+F + + + + L +L
Sbjct: 252 YLPDERHGLPD-MLRKLCSDPAALIESSAALTEKVPVGAFMVPRFTLSYKTNAAETLRQL 310
Query: 397 GIQAIFNRQNSGLTKILDND---EPLYVSKAVQKAFIEVN 507
G++ F + L++++++ E + VS ++F+EVN
Sbjct: 311 GLRLPFEYPGADLSEMVESSPEAEKIVVSAVYHESFVEVN 350
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = +2
Query: 8 TRLVLVNALYFKGTWQNQFDSISTMERPFYVDTETTVNIPMMYQENNFKYGESHD 172
T LVLVNA+YFKG W N F ST F+ ++V++P M + +Y HD
Sbjct: 165 TALVLVNAIYFKGKWSNPFPRSSTTTGKFHRLDGSSVDVPFMSSRED-QYIGFHD 218
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 41.9 bits (94), Expect = 5e-04
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 13/98 (13%)
Frame = +2
Query: 8 TRLVLVNALYFKGTWQNQFDSISTMERPFYVDTETTVNIPMMYQ-ENNFKYGESHD---- 172
TR V+ NA+YFKG W FD T ER F ++V +P M + ++ + HD
Sbjct: 87 TRHVVGNAIYFKGEWLAPFDKSDTAEREFRRLDGSSVEVPFMQRPSGSYHHVACHDGFRV 146
Query: 173 --------LNAQLLEMAYEGNDASMVIVLPNEINGLTG 262
+ L++ Y +M++ LP++ +GL G
Sbjct: 147 LRLPYKATSDTYNLKLRYSLPSFAMLVFLPDDRDGLPG 184
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 41.1 bits (92), Expect = 9e-04
Identities = 24/67 (35%), Positives = 34/67 (50%)
Frame = +2
Query: 8 TRLVLVNALYFKGTWQNQFDSISTMERPFYVDTETTVNIPMMYQENNFKYGESHDLNAQL 187
T LVLVNA+YFKG W + F ST F+ ++VN+ M + G N +
Sbjct: 115 TTLVLVNAIYFKGKWSDPFPRESTTTGKFHRLDGSSVNVRFMRSREDQYIGFYDGFN--V 172
Query: 188 LEMAYEG 208
L++ Y G
Sbjct: 173 LKLPYNG 179
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +2
Query: 8 TRLVLVNALYFKGTWQNQFDSISTMERPFYVDTETTVNIPMM 133
T LVLVNA+YFKG W N F T F+ ++V+ P M
Sbjct: 153 TALVLVNAIYFKGKWSNPFPRERTTTGKFHRLDGSSVDAPFM 194
Score = 36.7 bits (81), Expect = 0.019
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +1
Query: 340 VPKFKIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDEPLYVSKAVQKAFIEVNGKAP 519
VP+FK+ ++ +VL +GI A F+ L+ ++D E + V K + +A +EVN +
Sbjct: 292 VPRFKVSFYSEMNEVLKGMGIGAAFDVGKVDLSGMIDG-ELVVVEKVMHRAVVEVNEEGT 350
Query: 520 KQPPPQQLGIAFCSAFLTS 576
+ + F LTS
Sbjct: 351 EAAAATACTMKFLCLTLTS 369
>04_04_0620 + 26656072-26656417,26656585-26657396
Length = 385
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +1
Query: 340 VPKFKIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDEP--LYVSKAVQKAFIEVN 507
VPKFK +++D L +LG+ A F+ + L+++ N P LYVS QK +EV+
Sbjct: 264 VPKFKFSSQLDAGGALAQLGLGAPFDPDAADLSRMAVNTPPAGLYVSTMRQKCAVEVD 321
>01_01_1152 + 9170628-9171899
Length = 423
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +2
Query: 8 TRLVLVNALYFKGTWQNQFDSISTMERPFYVDTETTVNIPMMYQENNFK 154
T +VL NA++FKGTW F +T PF++ V P M E F+
Sbjct: 188 TVVVLANAVHFKGTWSLPFHPSATFHAPFHLLDGGAVRAPFMTTEIPFE 236
Score = 31.5 bits (68), Expect = 0.72
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Frame = +1
Query: 256 DGILQKLADGYDL---TSELDKMFSTKV-----RVTVPKFKIETEIDLLQVLPKLGIQAI 411
DG L KLAD YD+ T E K + R+ VPKFK + + + KLG+
Sbjct: 279 DGAL-KLADLYDMAVTTPEFIKKHTPAAEAPVRRLMVPKFKFSFKFEAKSDMRKLGVTRA 337
Query: 412 FNRQNSGLTKILDNDEPLYVSKAVQKAFIEVN 507
F + ++ + L++++ +A IEV+
Sbjct: 338 F--AGGDFSGMVTGGDGLFIAEVYHQATIEVD 367
>11_01_0771 + 6453130-6454488
Length = 452
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 8 TRLVLVNALYFKGTWQNQFDSISTMERPFY 97
T +VL NA+YFKG W F+ T +PFY
Sbjct: 202 TAVVLGNAIYFKGKWDRPFNESDTERKPFY 231
Score = 35.9 bits (79), Expect = 0.033
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +1
Query: 340 VPKFKIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDE---PLYVSKAVQKAFIEVN 507
VPKFK+ ++ L +LG++ F+ + + L+ ++++D PL+V KA IEVN
Sbjct: 338 VPKFKVSCGGSVVGALEQLGLRLPFSPELADLSDMVEDDGSGWPLFVGDIQHKAVIEVN 396
>05_06_0044 - 25150322-25151260
Length = 312
Score = 32.7 bits (71), Expect = 0.31
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 8/92 (8%)
Frame = +2
Query: 20 LVNALYFKGTWQNQFDSISTMERPFYVDTETTVNIPMMYQENNFKYGE-SHDLNAQLLEM 196
L N+LYF W + F T E F+V + V +P M + + + +L M
Sbjct: 80 LANSLYFNAYWDHPFFPHLTEEGDFHVSPDHDVRVPFMAGSHQHAFMDVGCHPGFNVLRM 139
Query: 197 AYE-----GNDA--SMVIVLPNEINGLTGYCR 271
Y G D +M I LP++ +GL R
Sbjct: 140 MYRTGGAAGGDKMFAMYIYLPDDRDGLPELAR 171
>08_01_0867 + 8458570-8459168,8460128-8460313,8462684-8463167
Length = 422
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 635 RGRKIAATNGRISIKGRYWWLVKNALQNAMPNCCGGGCFG 516
RGR ++ + + ++ + +L +N LQN + C G CFG
Sbjct: 255 RGRSHSSPDQKDALVSMWHFLKRNGLQNLYESFCEGTCFG 294
>08_02_0190 - 14037655-14038044,14038053-14038436
Length = 257
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -3
Query: 277 PASAVSRQAINFVRQHDNHAGIVTFIRHFK*LRIEVVALTILEIIFLVHHRNINCRF 107
P+S + +R+ G T IR + + +L + +I+L +HRN+ C F
Sbjct: 82 PSSTGYNMKLGVLRKKMGVPGECTLIRENGRITRQCQSLPSIHVIYLKYHRNVTCAF 138
>05_05_0300 +
23932947-23933196,23934022-23934123,23934249-23934317,
23934406-23934446
Length = 153
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/51 (23%), Positives = 27/51 (52%)
Frame = -1
Query: 216 ASLPSYAISSNCALRSWLSPYLKLFSWYIIGILTVVSVST*NGRSMVLIES 64
ASLP S CA +++ +L + W+++ ++ S N + ++++S
Sbjct: 15 ASLPLLVALSRCASHHFVAMFLLVSDWWVVAMMQKKSTDNINNKLQLVMKS 65
>10_05_0053 + 8602142-8603581
Length = 479
Score = 29.1 bits (62), Expect = 3.8
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -2
Query: 632 GRKIAATNGRISIKGRYWWLVKNAL 558
GR++ G ++++G +WL+KN L
Sbjct: 280 GRRLGEMTGAVAVRGSVFWLLKNLL 304
>02_01_0389 -
2816878-2817390,2817552-2817670,2817803-2817865,
2818229-2818355,2818607-2818827,2818973-2819136,
2819766-2819846,2820657-2820728,2820857-2820995,
2821206-2821690,2821995-2822550,2822610-2822666,
2822705-2822774
Length = 888
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -1
Query: 261 PVRPLISFGSTIT-MLASLPSYAISSNCALRSWLSPYLKLFSWYIIGILTVVSVST*NGR 85
P P F +++ + L SY++S + L P L Y++ LT + + R
Sbjct: 332 PYTPPFLFADSLSGTVQGLASYSVSLVATKNATLPPILNAMEMYLVKPLTEFATDPRDAR 391
Query: 84 SMVLIESNW 58
+M+ ++ N+
Sbjct: 392 AMMEVQQNY 400
>12_01_1048 +
10770461-10770612,10770721-10770730,10771457-10771624,
10771668-10772017,10772107-10772508,10772940-10773318,
10773801-10774046
Length = 568
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 581 WWLVKNALQNAMPNCCGGGCFGAFPLTS 498
+W+ K + Q + +C GG G FPL +
Sbjct: 50 YWIRKQSFQRSQRHCFGGSAPGEFPLAA 77
>11_06_0528 -
24681630-24681751,24681911-24682025,24682134-24682193,
24682454-24682513,24682606-24682668,24682752-24682798,
24682884-24683049,24683136-24683228,24683306-24683370,
24683462-24683537,24683644-24683709,24684114-24684203,
24684359-24684421,24684548-24684670
Length = 402
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 265 LQKLADGYDLTSELDKMFSTKVRVTVPKFKIETEIDLLQVLPKLGIQAIFNR 420
L K+ + L ++ V++ +I+ I+ ++ LPK G+Q +FNR
Sbjct: 161 LAKVGRQKEFEIALQRLRGKDADVSIEAAEIKEFIETIENLPKAGVQDLFNR 212
>04_03_0430 + 15836839-15836973,15837267-15837359,15838975-15839139
Length = 130
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +1
Query: 298 SELDKMFSTKVRVTVPKFKIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDE 459
++ DK+ K+RV PK ++ D + +L + + R +S + ILD E
Sbjct: 47 TDADKLTDVKIRVDPPKLLVQAHGDQSEDQEQLSTRLGYGRVHSIIENILDKCE 100
>04_03_0420 + 15703479-15703613,15703907-15703999,15705615-15705779
Length = 130
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +1
Query: 298 SELDKMFSTKVRVTVPKFKIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDE 459
++ DK+ K+RV PK ++ D + +L + + R +S + ILD E
Sbjct: 47 TDADKLTDVKIRVDPPKLLVQAHGDQSEDQEQLSTRLGYGRVHSIIENILDKCE 100
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +1
Query: 343 PKFKIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDEPLYVSKAVQKAFIEVNGKAPK 522
P+F+ + ++ +L+ L +GI+ + S IL D+P Y KA ++ + N +A K
Sbjct: 306 PEFEDDPDLYVLKPLKYIGIEVWQVKAGSVFDNILICDDPEYARKAAEETW-GANREAEK 364
Query: 523 Q 525
+
Sbjct: 365 E 365
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,012,363
Number of Sequences: 37544
Number of extensions: 453548
Number of successful extensions: 1240
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1238
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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