Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0717
         (735 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              25   0.74 
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    25   0.98 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   1.3  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        22   5.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   5.2  

>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 25.0 bits (52), Expect = 0.74
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = +1

Query: 385 LPKLGI-QAIFNRQNSGLTKILDNDEPLYVSKAVQK-AFIEVNG 510
           + K GI + I N  N G   I D +  LY+  A++K +F++ +G
Sbjct: 34  MAKTGINKQIINDVNDGKINIEDENVQLYIECAMKKFSFVDKDG 77


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
 Frame = +2

Query: 68  SISTMERPFYVDTETTVNIPMMYQENNFKYGESHDLNAQ-LLEMAYEGN-DASMVIVLPN 241
           S+  + R FY D      +P  Y    F+Y  + +L ++ L+    E N + S+   L +
Sbjct: 220 SLKGIARQFYNDDANVYILPDPYNTKFFRYRITPELYSEHLVVPEIEDNLETSLFRPLSS 279

Query: 242 EIN----GLTGYCRSWP 280
           E      G+  +C+++P
Sbjct: 280 EATDLRMGVASFCKAFP 296


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 224 PCWHRYLHTPFQVTAH*GRGSHH 156
           P +H + H P Q   H G   HH
Sbjct: 314 PSYHPHQHHPSQYHPHRGSSPHH 336


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 316 TFCPVPKLGRSHRPASAVSRQAINFVRQHDN 224
           T  P      S   A+AV+  A+N+ +QH++
Sbjct: 31  TTSPATASLESSLSAAAVAAAAVNYAQQHNS 61


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 524  CFGAFPLTSMKAFCTALDTYS 462
            CF   P+ S  + CTA++T S
Sbjct: 1702 CFTMRPVVSCASGCTAVETKS 1722


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,866
Number of Sequences: 438
Number of extensions: 4454
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)