Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0716
         (595 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    43   2e-06
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    36   3e-04
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   3.4  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   5.9  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 43.2 bits (97), Expect = 2e-06
 Identities = 25/77 (32%), Positives = 35/77 (45%)
 Frame = +2

Query: 299 LPRGETFVHTNELQMEEAVKVFRVLYYAKDFDVFMRTACWMRERXNGGMFVYAFTAACFH 478
           L R E F        + A K+ R+   A+  D  +  A + R+R N  +F YAF+ A  H
Sbjct: 74  LGRHENFSLFIPKHRKVAGKLIRIFLAAESIDDLLSNAVFCRDRVNPYLFYYAFSVALLH 133

Query: 479 RTDCKGLYLPLLTRSIP 529
           R D + L LP      P
Sbjct: 134 RPDTQNLDLPSFIHVFP 150


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 35.5 bits (78), Expect = 3e-04
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +2

Query: 383 KDFDVFMRTACWMRERXNGGMFVYAFTAACFHRTDCKGLYLPLLTRSIP 529
           ++ D  +  A + R+R N  +F YA + A  HR D + + LP    S P
Sbjct: 102 RNVDDLLSVAVYARDRVNPYLFSYALSVAILHRQDTQDIDLPSFIESFP 150



 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 585 FSHLHHKGFTDDMAVNEE 532
           F+HL H+ FT  + VN +
Sbjct: 474 FTHLQHQPFTYKITVNNQ 491


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 451 DEHASVXPFSHPARSPHENIEVLSVVEDSEDFDGFF 344
           D   ++ P + P R P +N + L  +E S +  G F
Sbjct: 125 DMETTLTPCASPNRKPDDNQDHLRRLEMSLEKSGLF 160


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 126 DMKMKELCIMKLLDHI 173
           D K+  LC+  L+DH+
Sbjct: 442 DEKLNALCMTWLMDHV 457


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,479
Number of Sequences: 336
Number of extensions: 2436
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)