Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0711
(648 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 200 8e-52
SB_56| Best HMM Match : Actin (HMM E-Value=0) 200 8e-52
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 200 8e-52
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 199 1e-51
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 190 1e-48
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 6e-25
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 4e-24
SB_54| Best HMM Match : Actin (HMM E-Value=0) 99 3e-21
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 78 5e-15
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 62 5e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 54 8e-08
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 7e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 51 7e-07
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.021
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 32 0.35
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 32 0.46
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.61
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.61
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 0.81
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 0.81
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.81
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 1.1
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 29 3.3
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 29 3.3
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 3.3
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 29 3.3
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 3.3
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 29 3.3
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) 29 4.3
SB_23472| Best HMM Match : HIT (HMM E-Value=0.43) 28 5.7
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028) 28 5.7
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32) 28 5.7
SB_12041| Best HMM Match : PHD (HMM E-Value=0.001) 28 5.7
SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0) 28 5.7
SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 27 9.9
SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 27 9.9
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 27 9.9
SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015) 27 9.9
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0) 27 9.9
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 200 bits (488), Expect = 8e-52
Identities = 100/132 (75%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 55 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 114
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
NREKM IMFETF +PAMYVAI A LSLYASGRT + T PI +G P
Sbjct: 115 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 174
Query: 613 HLRLDFSGXDFT 648
LRLD +G D T
Sbjct: 175 ILRLDLAGRDLT 186
Score = 109 bits (263), Expect = 1e-24
Identities = 49/52 (94%), Positives = 52/52 (100%)
Frame = +2
Query: 98 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 53
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 200 bits (488), Expect = 8e-52
Identities = 100/132 (75%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 55 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 114
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
NREKM IMFETF +PAMYVAI A LSLYASGRT + T PI +G P
Sbjct: 115 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 174
Query: 613 HLRLDFSGXDFT 648
LRLD +G D T
Sbjct: 175 ILRLDLAGRDLT 186
Score = 111 bits (266), Expect = 6e-25
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +2
Query: 98 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 53
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 200 bits (488), Expect = 8e-52
Identities = 100/132 (75%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
NREKM IMFETF +PAMYVAI A LSLYASGRT + T PI +G P
Sbjct: 116 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 175
Query: 613 HLRLDFSGXDFT 648
LRLD +G D T
Sbjct: 176 ILRLDLAGRDLT 187
Score = 117 bits (281), Expect = 9e-27
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = +2
Query: 92 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 199 bits (486), Expect = 1e-51
Identities = 99/132 (75%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
NREKM IMFETF +PAMYVAI A LSLYASGRT + T PI +G P
Sbjct: 116 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 175
Query: 613 HLRLDFSGXDFT 648
+RLD +G D T
Sbjct: 176 IIRLDLAGRDLT 187
Score = 112 bits (270), Expect = 2e-25
Identities = 51/54 (94%), Positives = 53/54 (98%)
Frame = +2
Query: 92 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 190 bits (462), Expect = 1e-48
Identities = 88/94 (93%), Positives = 89/94 (94%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRT 537
NREKM IMFETF +PAMYVAI A LSLYASGRT
Sbjct: 116 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT 149
Score = 112 bits (270), Expect = 2e-25
Identities = 49/54 (90%), Positives = 53/54 (98%)
Frame = +2
Query: 92 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 111 bits (266), Expect = 6e-25
Identities = 49/52 (94%), Positives = 52/52 (100%)
Frame = +2
Query: 98 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 53
Score = 74.5 bits (175), Expect = 7e-14
Identities = 33/36 (91%), Positives = 33/36 (91%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 363
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 55 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 60.1 bits (139), Expect = 2e-09
Identities = 36/72 (50%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +1
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
N + M IMFETF +PAMYVAI A LSLYASGRT + T PI +G P
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 613 HLRLDFSGXDFT 648
+RLD +G D T
Sbjct: 138 IIRLDLAGRDLT 149
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 108 bits (259), Expect = 4e-24
Identities = 60/148 (40%), Positives = 84/148 (56%), Gaps = 3/148 (2%)
Frame = +1
Query: 214 SGRDGRYGTEGLL*GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 390
S + G + L+ GDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 391 EHPVLLTEAPLNPKANREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVX 570
VLLTE PLNP NREKM +MFE + +Y+AI A L+LYA G
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGV 163
Query: 571 STTWPIXKGTHPPRHL--RLDFSGXDFT 648
+ P+ +G P HL RLD +G D T
Sbjct: 164 THICPVYEGFALP-HLTRRLDIAGRDIT 190
Score = 44.4 bits (100), Expect = 8e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +2
Query: 110 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 208
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 99.1 bits (236), Expect = 3e-21
Identities = 51/103 (49%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
Frame = +1
Query: 343 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMXXIMFETFYTPAMYVAIXAGLSLY 522
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M +MFE+F P MYVA+ A ++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 523 ASGRTPVSCWTXAXVXSTTWPIXKGTHPPRHL-RLDFSGXDFT 648
ASGRT + + S T P+ G P R+D +G D T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLT 2231
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 116 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 217
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 78.2 bits (184), Expect = 5e-15
Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +1
Query: 391 EHPVLLTEAPLNPKANREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVX 570
+HPVLLTEAPLNP+ NREK + FETF PA+++++ A LSLYA+GRT
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 571 STTWPIXKGTHPPRH-LRLDFSGXD 642
S + PI +G P +R D +G D
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRD 210
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 61.7 bits (143), Expect = 5e-10
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +1
Query: 301 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMXXIMFETFYT 480
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+ +MFE +
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 481 PAMYVAIXAGLSLYASGRT 537
PA ++ + L+ +A+GR+
Sbjct: 63 PAFFLCKNSVLTAFANGRS 81
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 217
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 54.4 bits (125), Expect = 8e-08
Identities = 33/65 (50%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +1
Query: 457 IMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPRHLRLDFS 633
IMFE F +PA+YVAI A LSLYASGRT + S PI +G P LRLD +
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 634 GXDFT 648
G D T
Sbjct: 61 GRDLT 65
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 7e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +2
Query: 86 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 232
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/51 (47%), Positives = 29/51 (56%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 408
GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 287 GDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 214 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 98
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 36.3 bits (80), Expect = 0.021
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +1
Query: 217 GRDGRYGTEGLL*GDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 387
GR G + GL G++ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 388 EEHPVLLTEAPLNPKANRE 444
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 32.3 bits (70), Expect = 0.35
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = -2
Query: 395 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASS--PHKSPSVPYRPS 222
CS + + C + ++V CS + V + ++C+ PH+ PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 221 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 129
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 256 GDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 372
GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 275 GDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = +2
Query: 104 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYEEMR 265
++A LV+D G+ K GFA + APR++ P+ + + + + + +G D EE +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSERRKLFIG--DQIEECK 282
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 189 GNTARGASSPAKPALHIPEPLSTT 118
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.5 bits (68), Expect = 0.61
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 189 GNTARGASSPAKPALHIPEPLSTT 118
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 31.1 bits (67), Expect = 0.81
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.1 bits (67), Expect = 0.81
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 31.1 bits (67), Expect = 0.81
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 31.1 bits (67), Expect = 0.81
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.1 bits (67), Expect = 0.81
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.1 bits (67), Expect = 0.81
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 189 GNTARGASSPAKPALHIPEPLSTT 118
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 885
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = -3
Query: 262 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 146
H++ + ++SH +HH ++ + +HG R + SCE+ L
Sbjct: 470 HIITKNIVSHLEHHDILY-----KFQHGFRKLRSCESQL 503
>SB_23472| Best HMM Match : HIT (HMM E-Value=0.43)
Length = 168
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 262 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 44 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 80
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 189 GNTARGASSPAKPALHIPEPLSTT 118
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028)
Length = 252
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 262 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 89 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 125
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 189 GNTARGASSPAKPALHIPEPLSTT 118
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +3
Query: 417 SPQPQGQQREDXPXHVRNILHARHVRRHPSR 509
SP P+ R D P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1134
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 262 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 673 HIIFHDIMNHIDTHNILV-----KFQHGFRRFFSCETQLITT 709
>SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)
Length = 698
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 262 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 292 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 328
>SB_12041| Best HMM Match : PHD (HMM E-Value=0.001)
Length = 560
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 262 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 503 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 539
>SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 979
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 262 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 129 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 165
>SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 209
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 110
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151
Query: 109 NFFVAHLE 86
V L+
Sbjct: 152 QVDVLLLD 159
>SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 522
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 110
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151
Query: 109 NFFVAHLE 86
V L+
Sbjct: 152 QVDVLLLD 159
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 204 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 94
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 221
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 110
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 126 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 184
Query: 109 NFFVAHLE 86
V L+
Sbjct: 185 QVDVLLLD 192
>SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015)
Length = 224
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 110
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 43 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 101
Query: 109 NFFVAHLE 86
V L+
Sbjct: 102 QVDVLLLD 109
>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1676
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 110
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 715 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 773
Query: 109 NFFVAHLE 86
V L+
Sbjct: 774 QVDVLLLD 781
>SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1176
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 110
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 799 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 857
Query: 109 NFFVAHLE 86
V L+
Sbjct: 858 QVDVLLLD 865
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,721,473
Number of Sequences: 59808
Number of extensions: 491705
Number of successful extensions: 1426
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1412
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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