Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0711
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         202   6e-54
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         202   6e-54
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         202   6e-54
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          196   4e-52
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.7  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   4.8  
AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding pr...    23   6.3  
EF519478-1|ABP73565.1|  165|Anopheles gambiae CTLMA2 protein.          23   8.3  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          23   8.3  
AY062204-1|AAL58565.1|  150|Anopheles gambiae cytochrome P450 CY...    23   8.3  
AY062200-1|AAL58561.1|  151|Anopheles gambiae cytochrome P450 CY...    23   8.3  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   8.3  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  202 bits (494), Expect = 6e-54
 Identities = 102/132 (77%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
 Frame = +1

Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
           GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115

Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
           NREKM  IMFETF TPAMYVAI A LSLYASGRT           S T PI +G   P  
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 175

Query: 613 HLRLDFSGXDFT 648
            LRLD +G D T
Sbjct: 176 ILRLDLAGRDLT 187



 Score =  119 bits (287), Expect = 7e-29
 Identities = 54/54 (100%), Positives = 54/54 (100%)
 Frame = +2

Query: 92  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  202 bits (494), Expect = 6e-54
 Identities = 102/132 (77%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
 Frame = +1

Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
           GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115

Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
           NREKM  IMFETF TPAMYVAI A LSLYASGRT           S T PI +G   P  
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 175

Query: 613 HLRLDFSGXDFT 648
            LRLD +G D T
Sbjct: 176 ILRLDLAGRDLT 187



 Score =  119 bits (287), Expect = 7e-29
 Identities = 54/54 (100%), Positives = 54/54 (100%)
 Frame = +2

Query: 92  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  202 bits (494), Expect = 6e-54
 Identities = 102/132 (77%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
 Frame = +1

Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
           GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115

Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
           NREKM  IMFETF TPAMYVAI A LSLYASGRT           S T PI +G   P  
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 175

Query: 613 HLRLDFSGXDFT 648
            LRLD +G D T
Sbjct: 176 ILRLDLAGRDLT 187



 Score =  119 bits (287), Expect = 7e-29
 Identities = 54/54 (100%), Positives = 54/54 (100%)
 Frame = +2

Query: 92  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  196 bits (479), Expect = 4e-52
 Identities = 97/132 (73%), Positives = 103/132 (78%), Gaps = 1/132 (0%)
 Frame = +1

Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
           GDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK+
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKS 115

Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
           NREKM  IMFETF  PA+YVAI A LSLYASGRT           S T PI +G   P  
Sbjct: 116 NREKMTQIMFETFAAPAVYVAIQAVLSLYASGRTTGVVLDSGDGVSHTVPIYEGYALPHA 175

Query: 613 HLRLDFSGXDFT 648
            LR+D +G D T
Sbjct: 176 ILRMDLAGRDLT 187



 Score =  110 bits (265), Expect = 3e-26
 Identities = 48/54 (88%), Positives = 51/54 (94%)
 Frame = +2

Query: 92  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
           MCD++  ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD+Y
Sbjct: 1   MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAY 54


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +2

Query: 170 APRAVFPSIVGRPRHQGVMVGMGQKDSYEEMR 265
           A   ++PS+   P   G++ GMG +  +E M+
Sbjct: 411 AGHPLYPSLPYPPNLYGMLPGMGMQSIHERMK 442


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 199 GKAPPSGRDGRYGTEGL 249
           G+  P GRDG +G  GL
Sbjct: 344 GQPGPRGRDGNFGPVGL 360


>AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP55 protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 86  FKMCDEEVAALVVDNGSGMC 145
           +++C E+ A   +DNG+ MC
Sbjct: 42  YRVCHEQHATPQMDNGTVMC 61


>EF519478-1|ABP73565.1|  165|Anopheles gambiae CTLMA2 protein.
          Length = 165

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 205 PSHDRGEHGARSIISC 158
           P+H RGEHG +    C
Sbjct: 121 PNHARGEHGQQPAERC 136


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -3

Query: 163 SCETGLAHTGAIVYYQRGNFFVAHLELVFN*IVLL*INKLTCYCTASL 20
           S  TGLAH    +   RG   +AH +L    I++   + LTC C   L
Sbjct: 162 SIATGLAHLHMDIVGTRGKPAIAHRDLKSKNILVK--SNLTC-CIGDL 206


>AY062204-1|AAL58565.1|  150|Anopheles gambiae cytochrome P450
           CYP4C28 protein.
          Length = 150

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 273 QKRYPDPQIPHRTRNRH 323
           +K YPD  +P  + NRH
Sbjct: 117 EKFYPDRFLPENSTNRH 133


>AY062200-1|AAL58561.1|  151|Anopheles gambiae cytochrome P450
           CYP4G17 protein.
          Length = 151

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 285 PDPQIPHRTRNRH 323
           PD  +P RT+NRH
Sbjct: 122 PDNFLPERTQNRH 134


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 317 IPCSMGYLRVRIPLLLCASSPHKSP 243
           I C + Y R+    ++CA+  H+ P
Sbjct: 60  ITCQIAYRRIEGDRIVCAAYSHELP 84


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,763
Number of Sequences: 2352
Number of extensions: 15545
Number of successful extensions: 47
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)