Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0711
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 201 3e-52
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 201 3e-52
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 201 3e-52
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 201 3e-52
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 201 3e-52
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 201 3e-52
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 201 3e-52
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 201 3e-52
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 201 3e-52
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 201 3e-52
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 196 8e-51
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 134 7e-32
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 118 4e-27
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 118 4e-27
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 117 8e-27
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 117 8e-27
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 107 9e-24
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 95 3e-20
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 75 6e-14
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 36 0.033
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 36 0.033
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z70718-10|CAA94679.1| 512|Caenorhabditis elegans Hypothetical p... 28 5.0
Z68879-11|CAA93090.1| 512|Caenorhabditis elegans Hypothetical p... 28 5.0
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 6.6
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 8.7
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 8.7
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 8.7
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 8.7
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 201 bits (491), Expect = 3e-52
Identities = 101/132 (76%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
NREKM IMFETF TPAMYVAI A LSLYASGRT + T PI +G P
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 175
Query: 613 HLRLDFSGXDFT 648
LRLD +G D T
Sbjct: 176 ILRLDLAGRDLT 187
Score = 118 bits (284), Expect = 4e-27
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +2
Query: 92 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 201 bits (491), Expect = 3e-52
Identities = 101/132 (76%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
NREKM IMFETF TPAMYVAI A LSLYASGRT + T PI +G P
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA 175
Query: 613 HLRLDFSGXDFT 648
LRLD +G D T
Sbjct: 176 ILRLDLAGRDLT 187
Score = 117 bits (281), Expect = 8e-27
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = +2
Query: 92 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 201 bits (491), Expect = 3e-52
Identities = 101/132 (76%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
NREKM IMFETF TPAMYVAI A LSLYASGRT + T PI +G P
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 175
Query: 613 HLRLDFSGXDFT 648
LRLD +G D T
Sbjct: 176 ILRLDLAGRDLT 187
Score = 118 bits (284), Expect = 4e-27
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +2
Query: 92 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 201 bits (491), Expect = 3e-52
Identities = 101/132 (76%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
NREKM IMFETF TPAMYVAI A LSLYASGRT + T PI +G P
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 175
Query: 613 HLRLDFSGXDFT 648
LRLD +G D T
Sbjct: 176 ILRLDLAGRDLT 187
Score = 118 bits (284), Expect = 4e-27
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +2
Query: 92 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 201 bits (491), Expect = 3e-52
Identities = 101/132 (76%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
NREKM IMFETF TPAMYVAI A LSLYASGRT + T PI +G P
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 175
Query: 613 HLRLDFSGXDFT 648
LRLD +G D T
Sbjct: 176 ILRLDLAGRDLT 187
Score = 118 bits (284), Expect = 4e-27
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +2
Query: 92 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 201 bits (491), Expect = 3e-52
Identities = 101/132 (76%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
NREKM IMFETF TPAMYVAI A LSLYASGRT + T PI +G P
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA 175
Query: 613 HLRLDFSGXDFT 648
LRLD +G D T
Sbjct: 176 ILRLDLAGRDLT 187
Score = 115 bits (277), Expect = 3e-26
Identities = 50/54 (92%), Positives = 54/54 (100%)
Frame = +2
Query: 92 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 201 bits (491), Expect = 3e-52
Identities = 101/132 (76%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
NREKM IMFETF TPAMYVAI A LSLYASGRT + T PI +G P
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 175
Query: 613 HLRLDFSGXDFT 648
LRLD +G D T
Sbjct: 176 ILRLDLAGRDLT 187
Score = 118 bits (284), Expect = 4e-27
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +2
Query: 92 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 201 bits (491), Expect = 3e-52
Identities = 101/132 (76%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 12 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 71
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
NREKM IMFETF TPAMYVAI A LSLYASGRT + T PI +G P
Sbjct: 72 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 131
Query: 613 HLRLDFSGXDFT 648
LRLD +G D T
Sbjct: 132 ILRLDLAGRDLT 143
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 201 bits (491), Expect = 3e-52
Identities = 101/132 (76%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 42 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 101
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
NREKM IMFETF TPAMYVAI A LSLYASGRT + T PI +G P
Sbjct: 102 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 161
Query: 613 HLRLDFSGXDFT 648
LRLD +G D T
Sbjct: 162 ILRLDLAGRDLT 173
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 146 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 40
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 201 bits (491), Expect = 3e-52
Identities = 101/132 (76%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
NREKM IMFETF TPAMYVAI A LSLYASGRT + T PI +G P
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 175
Query: 613 HLRLDFSGXDFT 648
LRLD +G D T
Sbjct: 176 ILRLDLAGRDLT 187
Score = 118 bits (284), Expect = 4e-27
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +2
Query: 92 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 196 bits (479), Expect = 8e-51
Identities = 97/132 (73%), Positives = 103/132 (78%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+
Sbjct: 55 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKS 114
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKGTHPPRH 615
NREKM IMFETF TPAMYV I A LSLYASGRT + T PI +G P
Sbjct: 115 NREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHA 174
Query: 616 L-RLDFSGXDFT 648
+ RLD +G D T
Sbjct: 175 IQRLDLAGRDLT 186
Score = 111 bits (268), Expect = 3e-25
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +2
Query: 98 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 53
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 134 bits (323), Expect = 7e-32
Identities = 65/133 (48%), Positives = 87/133 (65%), Gaps = 2/133 (1%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPK 432
G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP
Sbjct: 58 GPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPL 117
Query: 433 ANREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKGTHPPR 612
NRE+ I FETF PA+Y+ + A LSLYA+GRT + PI KG
Sbjct: 118 KNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKH 177
Query: 613 HL-RLDFSGXDFT 648
+ R+D +G D T
Sbjct: 178 AIQRMDLAGRDVT 190
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +2
Query: 116 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 232
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 118 bits (284), Expect = 4e-27
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +2
Query: 92 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 70.9 bits (166), Expect = 7e-13
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 348
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 118 bits (284), Expect = 4e-27
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +2
Query: 92 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 70.9 bits (166), Expect = 7e-13
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 348
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 117 bits (281), Expect = 8e-27
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = +2
Query: 92 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 70.9 bits (166), Expect = 7e-13
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 348
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 117 bits (281), Expect = 8e-27
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = +2
Query: 92 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 65.3 bits (152), Expect = 4e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDM 339
GDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 107 bits (256), Expect = 9e-24
Identities = 60/146 (41%), Positives = 83/146 (56%), Gaps = 3/146 (2%)
Frame = +1
Query: 220 RDGRYGTEGLL*GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 396
R G + L+ G+E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 397 PVLLTEAPLNPKANREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXST 576
+LLTE PLNP +NREKM +MFE + ++YVA+ A L+LYA G +
Sbjct: 106 KLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTH 165
Query: 577 TWPIXKGTHPPRHL--RLDFSGXDFT 648
P+ +G HL RLD +G D T
Sbjct: 166 ICPVYEG-FALHHLTRRLDIAGRDIT 190
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 116 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 208
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 95.5 bits (227), Expect = 3e-20
Identities = 47/92 (51%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +1
Query: 256 GDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 432
GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN
Sbjct: 68 GDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTP 127
Query: 433 ANREKMXXIMFETFYTPAMYVAIXAGLSLYAS 528
NRE IMFE+F P +Y+A+ A L+L AS
Sbjct: 128 ENREYTAEIMFESFNVPGLYIAVQAVLALTAS 159
Score = 36.7 bits (81), Expect = 0.014
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 92 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 199
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 74.5 bits (175), Expect = 6e-14
Identities = 34/78 (43%), Positives = 49/78 (62%)
Frame = +1
Query: 304 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMXXIMFETFYTP 483
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+ IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 484 AMYVAIXAGLSLYASGRT 537
A Y++ LS +A GRT
Sbjct: 154 AYYLSKNVVLSCFAQGRT 171
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 199
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 35.5 bits (78), Expect = 0.033
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = +1
Query: 259 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 438
+E K + ++ PIE G V NWD ++IW TF + V + LT+ A
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPAL 106
Query: 439 REKMXXIMFETF 474
+ I+F+ F
Sbjct: 107 PDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 35.5 bits (78), Expect = 0.033
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = +1
Query: 259 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 438
+E K + ++ PIE G V NWD ++IW TF + V + LT+ A
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPAL 106
Query: 439 REKMXXIMFETF 474
+ I+F+ F
Sbjct: 107 PDVSSEILFDYF 118
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = -2
Query: 353 CQIFSMSSQLVTIPC-SMGYLRVRIP---LLLCASSPHKSPSVPYRPSRPDG 210
CQ+FS QLVT+ SMG +++++ L L AS P++ P DG
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPEIDG 302
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 196 RGKAPPSGRDGRYGTEGLL*GDEAQSKRG 282
RGKA +GRDGR G EG Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>Z70718-10|CAA94679.1| 512|Caenorhabditis elegans Hypothetical
protein C04G2.11 protein.
Length = 512
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 346 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMXXIMFETFYT 480
I ++T N L ++ + + E NP N +KM I+ E F+T
Sbjct: 135 ILNNTKLNNLNISSLSNSNNIVEIKNNPNLNLQKMCSIIHEVFFT 179
>Z68879-11|CAA93090.1| 512|Caenorhabditis elegans Hypothetical
protein C04G2.11 protein.
Length = 512
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 346 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMXXIMFETFYT 480
I ++T N L ++ + + E NP N +KM I+ E F+T
Sbjct: 135 ILNNTKLNNLNISSLSNSNNIVEIKNNPNLNLQKMCSIIHEVFFT 179
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 146 KAGFAGDDAPRAVFPSIVGRPRHQG 220
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 171 ASSPAKPALHIPEPLSTTNAATSS 100
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 171 ASSPAKPALHIPEPLSTTNAATSS 100
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 171 ASSPAKPALHIPEPLSTTNAATSS 100
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 171 ASSPAKPALHIPEPLSTTNAATSS 100
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,359,219
Number of Sequences: 27780
Number of extensions: 336097
Number of successful extensions: 1075
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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