Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0711
(648 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 201 4e-52
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 200 5e-52
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 200 5e-52
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 199 1e-51
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 199 1e-51
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 199 1e-51
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 199 1e-51
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 198 3e-51
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 198 3e-51
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 182 1e-46
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 173 8e-44
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 167 6e-42
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 103 8e-23
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 94 8e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 83 1e-16
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 67 8e-12
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 60 9e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 56 2e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 46 3e-05
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.094
At1g16690.2 68414.m01999 transcription factor-related similar to... 30 1.5
At1g16690.1 68414.m01998 transcription factor-related similar to... 30 1.5
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 6.1
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 8.1
At1g55420.1 68414.m06339 DC1 domain-containing protein contains ... 27 8.1
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 201 bits (490), Expect = 4e-52
Identities = 101/132 (76%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 57 GDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 116
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
NREKM IMFETF TPAMYVAI A LSLYASGRT S T PI +G P
Sbjct: 117 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 176
Query: 613 HLRLDFSGXDFT 648
LRLD +G D T
Sbjct: 177 ILRLDLAGRDLT 188
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+Y
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY 55
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 200 bits (489), Expect = 5e-52
Identities = 101/132 (76%), Positives = 103/132 (78%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 57 GDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 116
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
NREKM IMFETF TPAMYVAI A LSLYASGRT S T PI +G P
Sbjct: 117 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 176
Query: 613 HLRLDFSGXDFT 648
LRLD +G D T
Sbjct: 177 ILRLDLAGRDLT 188
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+Y
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY 55
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 200 bits (489), Expect = 5e-52
Identities = 101/132 (76%), Positives = 103/132 (78%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 57 GDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 116
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
NREKM IMFETF TPAMYVAI A LSLYASGRT S T PI +G P
Sbjct: 117 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 176
Query: 613 HLRLDFSGXDFT 648
LRLD +G D T
Sbjct: 177 ILRLDLAGRDLT 188
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+Y
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY 55
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 199 bits (485), Expect = 1e-51
Identities = 100/132 (75%), Positives = 103/132 (78%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 57 GDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 116
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
NREKM IMFETF PAMYVAI A LSLYASGRT S T PI +G P
Sbjct: 117 NREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 176
Query: 613 HLRLDFSGXDFT 648
LRLD +G D T
Sbjct: 177 ILRLDLAGRDLT 188
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+Y
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY 55
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 199 bits (485), Expect = 1e-51
Identities = 98/132 (74%), Positives = 105/132 (79%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKA
Sbjct: 57 GDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKA 116
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
NREKM IMFETF +PAMYVAI A LSLYASGRT S T PI +G + P
Sbjct: 117 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHA 176
Query: 613 HLRLDFSGXDFT 648
LRLD +G D T
Sbjct: 177 ILRLDLAGRDLT 188
Score = 90.6 bits (215), Expect = 8e-19
Identities = 38/51 (74%), Positives = 45/51 (88%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+Y
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAY 55
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 199 bits (485), Expect = 1e-51
Identities = 98/132 (74%), Positives = 105/132 (79%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKA
Sbjct: 57 GDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKA 116
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
NREKM IMFETF +PAMYVAI A LSLYASGRT S T PI +G + P
Sbjct: 117 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHA 176
Query: 613 HLRLDFSGXDFT 648
LRLD +G D T
Sbjct: 177 ILRLDLAGRDLT 188
Score = 90.6 bits (215), Expect = 8e-19
Identities = 38/51 (74%), Positives = 45/51 (88%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+Y
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAY 55
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 199 bits (485), Expect = 1e-51
Identities = 98/132 (74%), Positives = 105/132 (79%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKA
Sbjct: 57 GDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKA 116
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
NREKM IMFETF +PAMYVAI A LSLYASGRT S T PI +G + P
Sbjct: 117 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHA 176
Query: 613 HLRLDFSGXDFT 648
LRLD +G D T
Sbjct: 177 ILRLDLAGRDLT 188
Score = 90.6 bits (215), Expect = 8e-19
Identities = 38/51 (74%), Positives = 45/51 (88%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+Y
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAY 55
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 198 bits (483), Expect = 3e-51
Identities = 99/132 (75%), Positives = 102/132 (77%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKA
Sbjct: 57 GDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKA 116
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
NREKM IMFETF PAMYVAI A LSLYASGRT S T PI +G P
Sbjct: 117 NREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 176
Query: 613 HLRLDFSGXDFT 648
LRLD +G D T
Sbjct: 177 ILRLDLAGRDLT 188
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+Y
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY 55
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 198 bits (483), Expect = 3e-51
Identities = 99/132 (75%), Positives = 102/132 (77%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKA
Sbjct: 57 GDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKA 116
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
NREKM IMFETF PAMYVAI A LSLYASGRT S T PI +G P
Sbjct: 117 NREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 176
Query: 613 HLRLDFSGXDFT 648
LRLD +G D T
Sbjct: 177 ILRLDLAGRDLT 188
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+Y
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY 55
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 182 bits (444), Expect = 1e-46
Identities = 87/132 (65%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK
Sbjct: 58 GDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKV 117
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKG-THPPR 612
NREKM IMFE+F P+MY+ I A LSLY+SGRT S T PI +G P
Sbjct: 118 NREKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHA 177
Query: 613 HLRLDFSGXDFT 648
LRLD +G D T
Sbjct: 178 ILRLDLAGRDLT 189
Score = 89.4 bits (212), Expect = 2e-18
Identities = 38/51 (74%), Positives = 46/51 (90%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTF 56
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 173 bits (421), Expect = 8e-44
Identities = 82/132 (62%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA
Sbjct: 12 GDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKA 71
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTTWPIXKGTHPPRH 615
+REKM IMFETF P+MY+ + A LSL+ASGRT + S PI +G+ P
Sbjct: 72 DREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSALPHA 131
Query: 616 -LRLDFSGXDFT 648
LRLD +G T
Sbjct: 132 ILRLDLAGRHLT 143
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 167 bits (406), Expect = 6e-42
Identities = 86/144 (59%), Positives = 98/144 (68%), Gaps = 1/144 (0%)
Frame = +1
Query: 220 RDGRYGTEGLL*GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 399
RDG E + G+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYV-GEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 400 VLLTEAPLNPKANREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSCWTXAXVXSTT 579
VLLTEAP NPKANREKM IMFE+F PAMYV++ + L LY+SGRT S T
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHT 153
Query: 580 WPIXKGTHPPRH-LRLDFSGXDFT 648
P+ +G P LRLD G D T
Sbjct: 154 VPVYEGYALPHGILRLDLGGRDLT 177
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +2
Query: 116 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 211
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 103 bits (248), Expect = 8e-23
Identities = 44/92 (47%), Positives = 59/92 (64%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
G+ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP
Sbjct: 56 GETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSK 115
Query: 436 NREKMXXIMFETFYTPAMYVAIXAGLSLYASG 531
NREKM MFE + +++ I A L+LYA G
Sbjct: 116 NREKMIETMFEKYNFAGVFIQIQAVLTLYAQG 147
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 7/59 (11%)
Frame = +2
Query: 116 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKD-----SYEEMRHR 271
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD + E+RH+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQ 65
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 93.9 bits (223), Expect = 8e-20
Identities = 49/101 (48%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Frame = +1
Query: 256 GDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 426
GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL
Sbjct: 71 GDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLT 130
Query: 427 PKANREKMXXIMFETFYTPAMYVAIXAGLSLYASGRTPVSC 549
P +RE I+FETF P +Y+A+ + L+L A+G T C
Sbjct: 131 PPESREYTGEILFETFNVPGLYIAVNSVLAL-AAGYTTSKC 170
Score = 35.9 bits (79), Expect = 0.023
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 113 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 199
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 83.4 bits (197), Expect = 1e-16
Identities = 39/94 (41%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Frame = +1
Query: 256 GDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 432
G +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN +
Sbjct: 78 GSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQ 137
Query: 433 ANREKMXXIMFETFYTPAMYVAIXAGLSLYASGR 534
REK +MFE + PA+++A L+ +A+GR
Sbjct: 138 QQREKAAELMFEKYKVPALFMAKNPVLTSFATGR 171
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 202
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 67.3 bits (157), Expect = 8e-12
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 223 DGRYGTEGLL*GDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 399
D G L G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Query: 400 VLLTEAPLNPKANREKMXXIMFETFY 477
+LL E PLN + REK F TFY
Sbjct: 121 MLLAEPPLNSQQQREKSG---FSTFY 143
Score = 57.2 bits (132), Expect = 9e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 202
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 60.5 bits (140), Expect = 9e-10
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 301 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMXXIMFETFY 477
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ +MFETF
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 478 TPAMYVAIXAGLSLYASGR 534
Y + A LSLYA GR
Sbjct: 117 VSGFYASEQAVLSLYAVGR 135
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 113 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 205
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +1
Query: 292 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMXXIMFET 471
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + ++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 472 FYTPAMYVAIXAGL-SLYASGRTPVS 546
F ++Y+A L LY + R P S
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDS 146
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 116 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 208
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 301 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMXXIMFETFY 477
P + +V ++ ME I + F + +HP+L+TE NP +R KM ++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 478 TPAMYVAIXAGLS 516
PA+ + A S
Sbjct: 145 VPAVAFGVDAAFS 157
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 116 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 217
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.094
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 237 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 100
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.9 bits (64), Expect = 1.5
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +1
Query: 247 LL*GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 426
LL D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 165 LLQPDAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYN 220
Query: 427 PKANREK 447
REK
Sbjct: 221 VFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.9 bits (64), Expect = 1.5
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +1
Query: 247 LL*GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 426
LL D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 165 LLQPDAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYN 220
Query: 427 PKANREK 447
REK
Sbjct: 221 VFRPREK 227
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -2
Query: 347 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 258
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 213 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 91
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At1g55420.1 68414.m06339 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 725
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -2
Query: 398 GCSSGATRSSL*K-V*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPHKSPSVPY 231
GC S + S + + C+ F + + T+PC Y R PL LC + S Y
Sbjct: 529 GCGSDSCSSYFLECIKCKSF-LGIKCATLPCEAHYTHDRHPLTLCYEEEEDTTSGQY 584
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,686,607
Number of Sequences: 28952
Number of extensions: 317982
Number of successful extensions: 812
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -