Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0709
         (305 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   2.9  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    20   5.1  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    20   5.1  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    20   6.7  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    19   8.8  

>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 154 KNPRSLQLRRLTSTSPHTLXRPRTSRPDP 240
           ++ R  +  R   T  +   RPRTSR +P
Sbjct: 214 RSKRQPKTGREDQTRRNPYYRPRTSRTEP 242


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 20.2 bits (40), Expect = 5.1
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 24  SLAVMENETHSLESIINNNLTGRDLEEFNRI 116
           SLA++   T  + ++    L GR +EE N+I
Sbjct: 227 SLALLMQLTQLVPALFVIYLCGRVMEEQNKI 257


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.2 bits (40), Expect = 5.1
 Identities = 5/19 (26%), Positives = 13/19 (68%)
 Frame = -2

Query: 109 LNSSKSRPVKLLFIIDSRL 53
           +N+   +P+++LF + S +
Sbjct: 307 INAESRKPIRILFDVSSEI 325


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 292 IGGHRDGMLNYS 257
           IGG  +G +NYS
Sbjct: 98  IGGWNEGSVNYS 109


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 5/17 (29%), Positives = 10/17 (58%)
 Frame = -2

Query: 301 DWTIGGHRDGMLNYSYF 251
           +WT  GH     +++Y+
Sbjct: 285 NWTANGHGHNTSSHNYY 301


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,432
Number of Sequences: 336
Number of extensions: 874
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5518292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)