Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0709
         (305 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0402 - 2934074-2937217                                           26   6.7  
12_02_1026 - 25478462-25479232,25479249-25479821                       25   8.9  

>02_01_0402 - 2934074-2937217
          Length = 1047

 Score = 25.8 bits (54), Expect = 6.7
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 72  NNNLTGRDLEEFNRIHF 122
           NNNLTG   E  N++HF
Sbjct: 606 NNNLTGTIPEALNKLHF 622


>12_02_1026 - 25478462-25479232,25479249-25479821
          Length = 447

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -1

Query: 143 FKVIPPPKMNSVELFQVAPG 84
           F+  PPP +N+ ++  ++PG
Sbjct: 301 FQAAPPPPLNAFDIISMSPG 320


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,249,185
Number of Sequences: 37544
Number of extensions: 109008
Number of successful extensions: 197
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 363831720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)