Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0709
         (305 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    22   6.0  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            21   7.9  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    21   7.9  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 66   IINNNLTGRDLEEFNRIHFGRRNNLEIKLKES 161
            I+N N   RDL  F R  + +   +E+K +ES
Sbjct: 2085 ILNPNWYVRDLYFFKRSQYPQLRLVEMKPEES 2116


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 57   LESIINNNLTGR 92
            LE++IN NLT R
Sbjct: 1005 LENVINGNLTSR 1016


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/45 (24%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +3

Query: 33  VMENETHSLESI--INNNLTGRDLEEFNRIHFGRRNNLEIKLKES 161
           + +  +H +E+   +N   +    E+  R++   R+NL+ K+K S
Sbjct: 278 IAQCRSHCIEARRKMNRAKSSEQREDLRRLYILARSNLKRKIKAS 322


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 262,132
Number of Sequences: 2352
Number of extensions: 3692
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19992474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)