Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0709
         (305 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ277968-1|CAB96205.1| 1128|Drosophila melanogaster TRPgamma cat...    27   3.4  
AJ277967-1|CAB96204.1| 1128|Drosophila melanogaster TRPgamma cat...    27   3.4  
AE014134-2741|AAN10950.1| 1128|Drosophila melanogaster CG5996-PB...    27   3.4  
AE014134-2740|AAF53548.2| 1128|Drosophila melanogaster CG5996-PA...    27   3.4  
BT022943-1|AAY55359.1|  122|Drosophila melanogaster IP11222p pro...    26   7.9  
BT022376-1|AAY54792.1|  204|Drosophila melanogaster IP11522p pro...    26   7.9  
BT022268-1|AAY54684.1|  122|Drosophila melanogaster IP11422p pro...    26   7.9  

>AJ277968-1|CAB96205.1| 1128|Drosophila melanogaster TRPgamma cation
           channel long form protein.
          Length = 1128

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 48  THSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKE 158
           +H LE ++N++ TG   E   R+H  R   L IKL++
Sbjct: 252 SHELEILLNHDPTGPVYEHGERMHLNRL-KLAIKLRQ 287


>AJ277967-1|CAB96204.1| 1128|Drosophila melanogaster TRPgamma cation
           channel short form protein.
          Length = 1128

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 48  THSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKE 158
           +H LE ++N++ TG   E   R+H  R   L IKL++
Sbjct: 252 SHELEILLNHDPTGPVYEHGERMHLNRL-KLAIKLRQ 287


>AE014134-2741|AAN10950.1| 1128|Drosophila melanogaster CG5996-PB,
           isoform B protein.
          Length = 1128

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 48  THSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKE 158
           +H LE ++N++ TG   E   R+H  R   L IKL++
Sbjct: 252 SHELEILLNHDPTGPVYEHGERMHLNRL-KLAIKLRQ 287


>AE014134-2740|AAF53548.2| 1128|Drosophila melanogaster CG5996-PA,
           isoform A protein.
          Length = 1128

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 48  THSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKE 158
           +H LE ++N++ TG   E   R+H  R   L IKL++
Sbjct: 252 SHELEILLNHDPTGPVYEHGERMHLNRL-KLAIKLRQ 287


>BT022943-1|AAY55359.1|  122|Drosophila melanogaster IP11222p
           protein.
          Length = 122

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +3

Query: 39  ENETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKES 161
           E +   L ++I  +L  R  EEFN       N  +IKL +S
Sbjct: 9   EKQIMELSAVIEKHLKNRQDEEFNTKTLKAENEEKIKLTKS 49


>BT022376-1|AAY54792.1|  204|Drosophila melanogaster IP11522p
           protein.
          Length = 204

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +3

Query: 39  ENETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKES 161
           E +   L ++I  +L  R  EEFN       N  +IKL +S
Sbjct: 92  EKQIMELSAVIEKHLKNRQDEEFNTKTLKAENEEKIKLTKS 132


>BT022268-1|AAY54684.1|  122|Drosophila melanogaster IP11422p
           protein.
          Length = 122

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +3

Query: 39  ENETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKES 161
           E +   L ++I  +L  R  EEFN       N  +IKL +S
Sbjct: 9   EKQIMELSAVIEKHLKNRQDEEFNTKTLKAENEEKIKLTKS 49


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,959,363
Number of Sequences: 53049
Number of extensions: 178552
Number of successful extensions: 394
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 394
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 568694034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)