Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0709
         (305 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35663-14|CAA84733.1|  805|Caenorhabditis elegans Hypothetical p...    27   2.6  
AF068716-7|AAC17746.1|  384|Caenorhabditis elegans Hypothetical ...    26   4.5  
U80836-11|AAB37899.1|  180|Caenorhabditis elegans Hypothetical p...    26   6.0  
U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...    26   6.0  

>Z35663-14|CAA84733.1|  805|Caenorhabditis elegans Hypothetical
           protein T04A8.16 protein.
          Length = 805

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +1

Query: 166 SLQLRRLTSTSPHTLXRPRTSRPDPXEL*SRNSSAFHRG 282
           ++ L  LT   P  +    TS+ DP E+  +    FHRG
Sbjct: 399 NIDLNALTGWIPERIELSDTSKADPDEVFRKLFDRFHRG 437


>AF068716-7|AAC17746.1|  384|Caenorhabditis elegans Hypothetical
           protein F26D11.2 protein.
          Length = 384

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +3

Query: 33  VMENETHSLESIINNNLTGRDLEEFNRIHFG 125
           +  N    +E  + ++LTG + ++ N+IH G
Sbjct: 121 IYSNAAERIEKKLQSDLTGSNAQKANKIHMG 151


>U80836-11|AAB37899.1|  180|Caenorhabditis elegans Hypothetical
           protein B0432.3 protein.
          Length = 180

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 131 PPPKMNSVELFQVAPGQVV 75
           PPPKM++  LF++A G  V
Sbjct: 150 PPPKMSAETLFELAYGDTV 168


>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 17/66 (25%), Positives = 29/66 (43%)
 Frame = +3

Query: 57  LESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXXPAKDEQTR 236
           +E+ +   L G  L+E  RI +GR     +++   +                 A+ EQTR
Sbjct: 11  VETALAEKLDGVSLDEVERILYGRPYRA-LEISSIAEKLAQDGDFQLSGYIVDAQKEQTR 69

Query: 237 PPRIVK 254
            PR+V+
Sbjct: 70  APRLVR 75


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,955,216
Number of Sequences: 27780
Number of extensions: 87819
Number of successful extensions: 157
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 323034540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)