Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0705
         (640 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0473 + 8745721-8745994,8746083-8746090,8746232-8746324,874...    31   0.58 
01_06_1572 + 38319544-38319849,38320427-38320513,38320584-383206...    31   1.0  
07_03_1147 + 24349811-24350161,24351031-24351366,24353260-243533...    28   7.2  
02_02_0270 + 8431503-8431830,8431961-8432149,8434288-8434412,843...    27   9.5  
01_05_0166 + 18844468-18845184,18847394-18847690                       27   9.5  

>03_02_0473 + 8745721-8745994,8746083-8746090,8746232-8746324,
            8746665-8746893,8747314-8747420,8747560-8747622,
            8747883-8747983,8748996-8749090,8749330-8749350,
            8749987-8750082,8750188-8750308,8750415-8750570,
            8750679-8750869,8751207-8751478,8751853-8751954,
            8752006-8752038,8752132-8752308,8752397-8752466,
            8752512-8752585,8752667-8752908,8752983-8753129,
            8753526-8753751,8753893-8753970,8754378-8754521,
            8754829-8755008,8755335-8755394,8755484-8755523,
            8758653-8759137
          Length = 1294

 Score = 31.5 bits (68), Expect = 0.58
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +2

Query: 401  AVFDYVAQGEDELSLRRGEIVEV 469
            A++D+ A G+DELSL  GE VE+
Sbjct: 1089 ALYDFTAGGDDELSLTAGEDVEI 1111


>01_06_1572 +
           38319544-38319849,38320427-38320513,38320584-38320676,
           38321491-38321567,38321974-38322562,38322701-38322794,
           38322884-38322996,38323438-38323524,38323842-38323964,
           38324058-38324192,38324437-38324484,38324993-38325094,
           38325321-38325716
          Length = 749

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +3

Query: 513 GENRGPRWYIPGRVRHGRGPFSCGTTPGVLFRAQ 614
           GENR P   I  + +HG G FS   T G L+  Q
Sbjct: 349 GENRDPSNKIHRKEKHGMGEFSGMATTGALYSGQ 382


>07_03_1147 +
           24349811-24350161,24351031-24351366,24353260-24353376,
           24353585-24353647,24354066-24354139,24354216-24354306,
           24354791-24354850,24355270-24355462,24356242-24356522,
           24357435-24357536,24357664-24357774,24358410-24358475,
           24358562-24358660,24358757-24358788,24359171-24359274,
           24359380-24359507,24359625-24359756,24360051-24360359,
           24360887-24361071,24361161-24361263,24361407-24361552,
           24361748-24361827,24361901-24362103
          Length = 1121

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -3

Query: 638 RRRITSSSLSS-EKDTRGGXTAKGSSSVTYSAGNIPTRSPIFPVPILRPP 492
           RRRI ++ L++ E+  R    A   +SV +     P  +P  P P L PP
Sbjct: 8   RRRIEANRLAALERRKRFAEAAAADASVGWRLAKCPRFAPPPPQPTLPPP 57


>02_02_0270 +
           8431503-8431830,8431961-8432149,8434288-8434412,
           8434527-8434703,8434798-8434871,8434978-8435713
          Length = 542

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -3

Query: 599 DTRGGXTAKGSSSVTYSAGNIPTRSPIFPVPILRPPK 489
           D  GG   KG+ S+T S  N PT   + P+  +   K
Sbjct: 260 DPTGGVLTKGTHSLTSSPDNAPTSGRLKPMRFMSKSK 296


>01_05_0166 + 18844468-18845184,18847394-18847690
          Length = 337

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +2

Query: 428 EDELSLRRGEIVEVLSKDAY-ISGDEGWGRGKSGTALVYSRPSTS 559
           E+E   R  E+ E   +DA  ISG+E W R  + +     RPS+S
Sbjct: 99  EEEERERERELREREGRDALNISGEEAWKRRAAMSGSAAPRPSSS 143


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,393,955
Number of Sequences: 37544
Number of extensions: 295484
Number of successful extensions: 869
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)