Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0705
(640 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39694| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 50 2e-06
SB_18821| Best HMM Match : SH3_1 (HMM E-Value=5.7e-16) 38 0.009
SB_29076| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_49450| Best HMM Match : SH3_1 (HMM E-Value=6.9e-17) 36 0.037
SB_38286| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.037
SB_33663| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.064
SB_50893| Best HMM Match : SH3_1 (HMM E-Value=2e-33) 34 0.11
SB_48483| Best HMM Match : SH3_1 (HMM E-Value=7.1e-23) 34 0.11
SB_33662| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0) 32 0.34
SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26) 31 0.60
SB_8922| Best HMM Match : SH3_1 (HMM E-Value=0.19) 31 0.60
SB_10210| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.79
SB_5212| Best HMM Match : SH3_1 (HMM E-Value=4.9e-20) 31 0.79
SB_59676| Best HMM Match : VWA (HMM E-Value=8.8e-12) 30 1.4
SB_21135| Best HMM Match : Peroxin-13_N (HMM E-Value=0) 30 1.4
SB_52289| Best HMM Match : SH3_1 (HMM E-Value=3.5e-13) 30 1.8
SB_41947| Best HMM Match : SH3_1 (HMM E-Value=6.3e-24) 30 1.8
SB_46550| Best HMM Match : Asn_synthase (HMM E-Value=0) 29 2.4
SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_34642| Best HMM Match : SH3_1 (HMM E-Value=1.7e-14) 29 3.2
SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_7778| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0) 28 5.6
SB_33664| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_42806| Best HMM Match : MORN (HMM E-Value=0) 27 9.7
>SB_39694| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 893
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +2
Query: 392 LFTAVFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRGK 520
L A++DY A EDELS + E +E+LSKD ISGDE W G+
Sbjct: 21 LCIALYDYEAAEEDELSFKANECIELLSKDPEISGDEDWWVGR 63
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 526 DRVGIFPAEYVTEEDPLA--VXPPRVSFSELKLEEVI 630
+++G+FPA YVT E + P + F ++L +VI
Sbjct: 68 EKIGLFPANYVTNEKRKSSLFQPLEIPFRNIELIDVI 104
>SB_18821| Best HMM Match : SH3_1 (HMM E-Value=5.7e-16)
Length = 299
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2
Query: 401 AVFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRGK 520
A++DY A +DELS + GEIV LS+ D+GW RG+
Sbjct: 248 ALYDYEAAEDDELSFKAGEIVTKLSE----RDDQGWCRGR 283
>SB_29076| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 36.7 bits (81), Expect = 0.016
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +2
Query: 392 LFTAVFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGW 508
L A++D +A DEL+ R+G+++ VL KD I G GW
Sbjct: 3 LAKALYDNIADSADELTFRKGDVITVLEKD--IDGLFGW 39
>SB_49450| Best HMM Match : SH3_1 (HMM E-Value=6.9e-17)
Length = 288
Score = 35.5 bits (78), Expect = 0.037
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +2
Query: 392 LFTAVFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRGKS 523
L+TA+++Y Q EDEL L++GE VL K +GW +G S
Sbjct: 72 LYTALYNYKPQKEDELELKQGECYYVLEK-----CKDGWFKGVS 110
>SB_38286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 35.5 bits (78), Expect = 0.037
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +2
Query: 392 LFTAVFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRGKS 523
L+TA+++Y Q EDEL L++GE VL K +GW +G S
Sbjct: 72 LYTALYNYKPQKEDELELKQGECYYVLEK-----CKDGWFKGVS 110
>SB_33663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 34.7 bits (76), Expect = 0.064
Identities = 17/44 (38%), Positives = 30/44 (68%)
Frame = +2
Query: 392 LFTAVFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRGKS 523
L+ A++DY A+ +++LS ++GE++EV D ++ D W R KS
Sbjct: 72 LYLALYDYDARTQEDLSFKKGEVLEVNPDD--LAND--WWRAKS 111
>SB_50893| Best HMM Match : SH3_1 (HMM E-Value=2e-33)
Length = 665
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 407 FDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRGK 520
+DY Q EDEL L+ G+I+ ++ K+ + GW G+
Sbjct: 223 YDYEQQNEDELELKVGDIITIVKKEVF--DTPGWMEGE 258
>SB_48483| Best HMM Match : SH3_1 (HMM E-Value=7.1e-23)
Length = 936
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 401 AVFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRGK 520
A++D+VAQ EL+ ++G +EVL K+ D+ W +G+
Sbjct: 5 ALYDFVAQEAGELNFKKGNHIEVLDKE-----DDNWWKGR 39
>SB_33662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/39 (35%), Positives = 27/39 (69%)
Frame = +2
Query: 392 LFTAVFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGW 508
LF A++DY A+ +++LS ++GE +EV++ + G + W
Sbjct: 63 LFVALYDYEARTDEDLSFKKGEKLEVVND---LDGGDWW 98
>SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 824
Score = 32.3 bits (70), Expect = 0.34
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 386 LALFTAVFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRGKSGT 529
L + A F Y DEL L +G+++ VL K+ GD GW +G GT
Sbjct: 204 LCIVKAKFSYQPIHVDELQLTKGDLIHVLEKE----GD-GWWKGFIGT 246
>SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26)
Length = 2157
Score = 31.5 bits (68), Expect = 0.60
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +2
Query: 395 FTAVFDYVAQGEDELSLRRGEIVEVLSKD 481
+ A++D+ A ED+++ +G++V VL+KD
Sbjct: 1893 YVALWDFNATAEDDITASKGDVVTVLNKD 1921
>SB_8922| Best HMM Match : SH3_1 (HMM E-Value=0.19)
Length = 40
Score = 31.5 bits (68), Expect = 0.60
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +2
Query: 395 FTAVFDYVAQGEDELSLRRGEIVEVLSK 478
+ A +Y AQ EDEL L +G +VE+L++
Sbjct: 4 YIATHEYRAQEEDELDLEKGTVVELLTE 31
>SB_10210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 793
Score = 31.1 bits (67), Expect = 0.79
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 386 LALFTAVFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGW 508
L + A++DY A ++ELS G+ + V +D + D W
Sbjct: 561 LCMVRALYDYEAMSDEELSFNEGDTIYVTKQDDHGVDDGFW 601
>SB_5212| Best HMM Match : SH3_1 (HMM E-Value=4.9e-20)
Length = 300
Score = 31.1 bits (67), Expect = 0.79
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 401 AVFDYVAQGEDELSLRRGEIVEVLSKD 481
A+F Y AQ DEL+ +G + V+SKD
Sbjct: 239 AMFPYTAQKGDELTFYKGSVFNVMSKD 265
>SB_59676| Best HMM Match : VWA (HMM E-Value=8.8e-12)
Length = 678
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/30 (56%), Positives = 17/30 (56%)
Frame = +3
Query: 519 NRGPRWYIPGRVRHGRGPFSCGTTPGVLFR 608
N P YIP RVR RGPF TPG FR
Sbjct: 440 NDAPTAYIPRRVRPIRGPFG---TPGGAFR 466
>SB_21135| Best HMM Match : Peroxin-13_N (HMM E-Value=0)
Length = 383
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 392 LFTAVFDYVAQGEDELSLRRGEIVEVLSK 478
L A FD+ AQGEDELS G ++ + K
Sbjct: 271 LAKAEFDFNAQGEDELSFAAGTVLRLAPK 299
>SB_52289| Best HMM Match : SH3_1 (HMM E-Value=3.5e-13)
Length = 803
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 395 FTAVFDYVAQGEDELSLRRGEIVEVLSKD 481
F A+++Y AQG+ ELS + +I+ L ++
Sbjct: 366 FRALYEYEAQGDQELSFKASDIIRFLYEE 394
>SB_41947| Best HMM Match : SH3_1 (HMM E-Value=6.3e-24)
Length = 581
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +2
Query: 404 VFDYVAQGEDELSLRRGEIVEVLSKD 481
++D+ A ED++S+ +G++V VL++D
Sbjct: 314 LYDFEACAEDDVSVTKGDVVNVLNRD 339
>SB_46550| Best HMM Match : Asn_synthase (HMM E-Value=0)
Length = 1663
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 410 DYVAQGEDELSLRRGEIVEVLSK 478
+Y A E+E+SLR+G+ VEVL K
Sbjct: 50 NYRAATEEEISLRKGQFVEVLVK 72
>SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 401 AVFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRG 517
A++DY A DEL++ G+I+ V ++ D GW +G
Sbjct: 567 AIYDYQATQSDELTIHPGDIITVTAR-----LDNGWWQG 600
>SB_34642| Best HMM Match : SH3_1 (HMM E-Value=1.7e-14)
Length = 237
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2
Query: 389 ALFTAVFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRGK 520
A + ++DY A +DE+S+ G+I+ DA I DEGW G+
Sbjct: 180 AQYLVMYDYNAADDDEVSMVEGDII----VDAEII-DEGWMVGR 218
>SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 395 FTAVFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRGKS 523
+ A ++Y A DE+ L+ G+I+ ++ DEGW G S
Sbjct: 359 YVAAYNYTASDTDEIGLQEGDIITNPTRI-----DEGWMEGDS 396
>SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 873
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 401 AVFDYVAQGEDELSLRRGEIVEVLSK 478
A++DY A+ ELS ++G+I+ V +
Sbjct: 722 ALYDYSARSSKELSFKKGDIIRVFKR 747
>SB_7778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 392 LFTAVFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGW---GRGKSG 526
++ A FD+ E E+S+ G++V VL K E W GK G
Sbjct: 401 VYFAQFDFEGTSEAEVSIDAGQLVTVLQKHDLEGNPEWWLVEAEGKRG 448
>SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 704
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
Frame = +2
Query: 389 ALFTAVFDYVAQGEDELSLRRGEIVEVLSKDAY--------ISGDEGW 508
+L A DYV +GED +S GE E L +D++ +SG E W
Sbjct: 582 SLCVAKMDYVHEGEDAMSFSEGEEFEFL-EDSHSGWWLVRTLSGQENW 628
>SB_33664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/27 (37%), Positives = 21/27 (77%)
Frame = +2
Query: 392 LFTAVFDYVAQGEDELSLRRGEIVEVL 472
+F A++DY A+ ++LS ++GE +++L
Sbjct: 79 IFMALYDYDARTNEDLSFKKGERLQLL 105
>SB_42806| Best HMM Match : MORN (HMM E-Value=0)
Length = 778
Score = 27.5 bits (58), Expect = 9.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 552 VRHGRGPFSCGTTPGV 599
+RHG+G +SCG P V
Sbjct: 143 LRHGQGDYSCGNLPAV 158
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,171,338
Number of Sequences: 59808
Number of extensions: 333879
Number of successful extensions: 1436
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1436
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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