Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0705
(640 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical pr... 35 0.056
U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein. 35 0.056
AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk (m... 33 0.13
AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk (m... 33 0.13
Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical pr... 33 0.17
U28732-6|AAB04903.2| 489|Caenorhabditis elegans Hypothetical pr... 31 0.70
U28732-5|AAT92075.1| 495|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z81543-5|CAB04427.2| 507|Caenorhabditis elegans Hypothetical pr... 31 0.92
U32305-1|AAK18854.2| 469|Caenorhabditis elegans Hypothetical pr... 31 0.92
U29082-8|AAA68405.1| 228|Caenorhabditis elegans Sex muscle abno... 30 1.2
S88446-1|AAB21850.1| 228|Caenorhabditis elegans sem-5 protein. 30 1.2
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical... 30 1.2
U23412-2|AAN65294.1| 678|Caenorhabditis elegans Glycyl trna syn... 29 2.8
U23412-1|AAK21465.2| 742|Caenorhabditis elegans Glycyl trna syn... 29 2.8
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 28 4.9
L08403-3|AAT92076.1| 335|Caenorhabditis elegans Hypothetical pr... 28 4.9
AL021492-14|CAA16388.2| 473|Caenorhabditis elegans Hypothetical... 28 4.9
U39651-6|AAL11483.1| 286|Caenorhabditis elegans Temporarily ass... 28 6.5
U39651-5|AAL11482.2| 395|Caenorhabditis elegans Temporarily ass... 28 6.5
U20864-8|AAC46665.2| 330|Caenorhabditis elegans Peroxisome asse... 28 6.5
>Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical protein
F29D10.4 protein.
Length = 1100
Score = 34.7 bits (76), Expect = 0.056
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 401 AVFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRGK 520
AV+ Y AQ DELS G +E+++KDA GW +GK
Sbjct: 1051 AVYPYEAQDVDELSFEAGAEIELMNKDA-----SGWWQGK 1085
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 514 GKIGDRVGIFPAEYVTE 564
GK+ +RVG+FP YV E
Sbjct: 1084 GKVNNRVGLFPGNYVKE 1100
>U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein.
Length = 1036
Score = 34.7 bits (76), Expect = 0.056
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 401 AVFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRGK 520
AV+ Y AQ DELS G +E+++KDA GW +GK
Sbjct: 987 AVYPYEAQDVDELSFEAGAEIELMNKDA-----SGWWQGK 1021
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 514 GKIGDRVGIFPAEYVTE 564
GK+ +RVG+FP YV E
Sbjct: 1020 GKVNNRVGLFPGNYVKE 1036
>AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform a
protein.
Length = 1040
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +2
Query: 395 FTAVFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRGK 520
F A ++Y AQ +DEL+L G I+ +++ + + ++GW RG+
Sbjct: 74 FVASYEYEAQKDDELNLPLGAIITLVTVE---TNEDGWYRGE 112
>AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform b
protein.
Length = 978
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +2
Query: 395 FTAVFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRGK 520
F A ++Y AQ +DEL+L G I+ +++ + + ++GW RG+
Sbjct: 74 FVASYEYEAQKDDELNLPLGAIITLVTVE---TNEDGWYRGE 112
>Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical
protein M79.1c protein.
Length = 1209
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +2
Query: 392 LFTAVFDYVAQGEDELSLRRGEIVEVL 472
LF A++D+ GE++LSLR+G+ V +L
Sbjct: 104 LFVALYDFHGVGEEQLSLRKGDQVRIL 130
>Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical
protein M79.1b protein.
Length = 1214
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +2
Query: 392 LFTAVFDYVAQGEDELSLRRGEIVEVL 472
LF A++D+ GE++LSLR+G+ V +L
Sbjct: 109 LFVALYDFHGVGEEQLSLRKGDQVRIL 135
>Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical
protein M79.1a protein.
Length = 1224
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +2
Query: 392 LFTAVFDYVAQGEDELSLRRGEIVEVL 472
LF A++D+ GE++LSLR+G+ V +L
Sbjct: 119 LFVALYDFHGVGEEQLSLRKGDQVRIL 145
>U28732-6|AAB04903.2| 489|Caenorhabditis elegans Hypothetical
protein F45E1.7a protein.
Length = 489
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +2
Query: 404 VFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRGK 520
++DY DE++LR+GE++EVL++ + GW G+
Sbjct: 435 LYDYAPAEGDEIALRKGEMIEVLTEPDSL----GWCTGR 469
>U28732-5|AAT92075.1| 495|Caenorhabditis elegans Hypothetical
protein F45E1.7b protein.
Length = 495
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +2
Query: 404 VFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRGK 520
++DY DE++LR+GE++EVL++ + GW G+
Sbjct: 441 LYDYAPAEGDEIALRKGEMIEVLTEPDSL----GWCTGR 475
>Z81543-5|CAB04427.2| 507|Caenorhabditis elegans Hypothetical
protein F49B2.5 protein.
Length = 507
Score = 30.7 bits (66), Expect = 0.92
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +2
Query: 389 ALFTAVFDYVAQGEDELSLRRGEIVEVLS 475
A F A+F Y A+ +D+LS ++ +I+E+L+
Sbjct: 60 ANFVALFQYDARTDDDLSFKKDDILEILN 88
>U32305-1|AAK18854.2| 469|Caenorhabditis elegans Hypothetical
protein B0336.6 protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.92
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +2
Query: 404 VFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRG 517
++DY A EDEL+LR IV VL K+ D+ W G
Sbjct: 420 LYDYDAAKEDELTLRENAIVYVLKKN-----DDDWYEG 452
>U29082-8|AAA68405.1| 228|Caenorhabditis elegans Sex muscle
abnormal protein 5 protein.
Length = 228
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 401 AVFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRGK 520
A+FD+ Q EL+ +RG+++ +++KD D W G+
Sbjct: 161 ALFDFNPQESGELAFKRGDVITLINKD-----DPNWWEGQ 195
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 401 AVFDYVAQGEDELSLRRGEIVEVLSKD 481
A D+ A DELS +RG ++VL+KD
Sbjct: 5 AEHDFQAGSPDELSFKRGNTLKVLNKD 31
>S88446-1|AAB21850.1| 228|Caenorhabditis elegans sem-5 protein.
Length = 228
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 401 AVFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRGK 520
A+FD+ Q EL+ +RG+++ +++KD D W G+
Sbjct: 161 ALFDFNPQESGELAFKRGDVITLINKD-----DPNWWEGQ 195
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 401 AVFDYVAQGEDELSLRRGEIVEVLSKD 481
A D+ A DELS +RG ++VL+KD
Sbjct: 5 AEHDFQAGSPDELSFKRGNTLKVLNKD 31
>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
protein Y116A8C.36 protein.
Length = 1097
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +2
Query: 398 TAVFDYVAQGEDELSLRRGEIVEVLSKD--AYISGDEGWGRGKSG 526
TAV+DY A DEL + G+++ V K + SG KSG
Sbjct: 1043 TAVYDYEASQPDELGFKTGDVIIVTDKSEAEWWSGHREQDPSKSG 1087
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 404 VFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRGK 520
V D+VA ++L ++ GEIV++ K A GW G+
Sbjct: 979 VVDFVASAPNQLGIKVGEIVKIREKSA-----AGWWEGE 1012
>U23412-2|AAN65294.1| 678|Caenorhabditis elegans Glycyl trna
synthetase protein1, isoform b protein.
Length = 678
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 562 EEDPLAVXPPRVSFSELKLEEVIRRR 639
E+ +A+ P SF LKLE++++RR
Sbjct: 52 EDTEIALAPKEASFDRLKLEDLLKRR 77
>U23412-1|AAK21465.2| 742|Caenorhabditis elegans Glycyl trna
synthetase protein1, isoform a protein.
Length = 742
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 562 EEDPLAVXPPRVSFSELKLEEVIRRR 639
E+ +A+ P SF LKLE++++RR
Sbjct: 116 EDTEIALAPKEASFDRLKLEDLLKRR 141
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 386 LALFTAVFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRGK 520
L T+ +Y A DELS +G ++V+ + D+GW G+
Sbjct: 400 LYFVTSTHNYKAVDTDELSFEQGVQIKVIEANEDDQLDDGWRLGE 444
>L08403-3|AAT92076.1| 335|Caenorhabditis elegans Hypothetical
protein F42H10.3 protein.
Length = 335
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 401 AVFDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRG 517
A++DY A +DE+S G+I+ K D+GW G
Sbjct: 273 AIYDYAAADKDEISFLEGDIIVNCEKI-----DDGWMTG 306
>AL021492-14|CAA16388.2| 473|Caenorhabditis elegans Hypothetical
protein Y45F10D.13a protein.
Length = 473
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2
Query: 401 AVFDYVAQGEDELSLRRGEIV 463
A++ + A+ + ELSL+RGEI+
Sbjct: 220 AIYPFTARSDTELSLKRGEII 240
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 398 TAVFDYVAQGEDELSLRRGEIVEVLSK-DAYISGDEGWGRGKSG 526
TAV+ + + EL L RG+I+ ++ + D Y EG G+SG
Sbjct: 157 TAVYKFEPRSARELPLNRGDIIRIIREVDGYWM--EGERNGRSG 198
>U39651-6|AAL11483.1| 286|Caenorhabditis elegans Temporarily
assigned gene nameprotein 22, isoform b protein.
Length = 286
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 407 FDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRGKS 523
F Y + EDEL L +G+ V V+ K +GW +G++
Sbjct: 11 FTYEPRLEDELGLTKGDFVYVVEKST-----DGWWKGEA 44
>U39651-5|AAL11482.2| 395|Caenorhabditis elegans Temporarily
assigned gene nameprotein 22, isoform a protein.
Length = 395
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 407 FDYVAQGEDELSLRRGEIVEVLSKDAYISGDEGWGRGKS 523
F Y + EDEL L +G+ V V+ K +GW +G++
Sbjct: 123 FTYEPRLEDELGLTKGDFVYVVEKST-----DGWWKGEA 156
>U20864-8|AAC46665.2| 330|Caenorhabditis elegans Peroxisome
assembly factor protein13 protein.
Length = 330
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 401 AVFDYVAQGEDELSLRRGEIVEVLSKD 481
A+FD+ A E ELS GE + V K+
Sbjct: 242 ALFDFQASNEQELSFMNGETLRVAPKE 268
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,527,276
Number of Sequences: 27780
Number of extensions: 236942
Number of successful extensions: 636
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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