Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0701
         (492 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g36690.1 68415.m04501 oxidoreductase, 2OG-Fe(II) oxygenase fa...    30   0.74 
At1g55970.1 68414.m06419 histone acetyltransferase 4 (HAC4) simi...    29   2.2  
At2g39980.1 68415.m04913 transferase family protein contains Pfa...    28   3.0  
At5g17000.1 68418.m01991 NADP-dependent oxidoreductase, putative...    27   6.9  
At5g01210.1 68418.m00026 transferase family protein contains Pfa...    27   9.1  

>At2g36690.1 68415.m04501 oxidoreductase, 2OG-Fe(II) oxygenase
           family protein similar to IDS3 [Hordeum
           vulgare][GI:4514655], leucoanthocyanidin dioxygenase
           [SP|P51091][Malus domestica]; contains PF03171
           2OG-Fe(II) oxygenase superfamily domain
          Length = 366

 Score = 30.3 bits (65), Expect = 0.74
 Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 151 GVPKREDYELVEFVXPPLIDG-EVLVKAEWISVDPY*G 261
           G+P   DY  +  +    ++G ++L + EW++VDP  G
Sbjct: 235 GMPPHSDYGFLTLLLQDEVEGLQILYRDEWVTVDPIPG 272


>At1g55970.1 68414.m06419 histone acetyltransferase 4 (HAC4) similar
           to CREB-binding protein GB:AAC51770 GI:2443859 from
           [Homo sapiens]; contains Pfam PF02135: TAZ zinc finger
           profile; contains Pfam PF00569: Zinc finger, ZZ type
           domain; identical to histone acetyltransferase HAC4
           (GI:14794966) {Arabidopsis thaliana}
          Length = 1456

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = +2

Query: 47  SLSHSLEARVIRKLKELRKSR*PQQGST 130
           SLS  LE R+ +KLKE R+ R   QG T
Sbjct: 866 SLSKHLEERLFKKLKEERQERARLQGKT 893


>At2g39980.1 68415.m04913 transferase family protein contains Pfam
           profile PF02458 transferase family
          Length = 482

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = -1

Query: 312 PLDN*XGRRVQLGKSCKPLIRVDADPFGFNEDLAVDQRRXNKFD 181
           PL N  G  V +G S  P   +  + FG+   +AV   R NKFD
Sbjct: 399 PLGNADGASVTMGSS--PRFPMYDNDFGWGRPVAVRSGRSNKFD 440


>At5g17000.1 68418.m01991 NADP-dependent oxidoreductase, putative
           strong similarity to probable NADP-dependent
           oxidoreductase (zeta-crystallin homolog) P1
           [SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430],
           Arabidopsis thaliana
          Length = 345

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 18/60 (30%), Positives = 24/60 (40%)
 Frame = +3

Query: 231 RMDQRRPVLRAYNSYQAVPYDXFSYQVGVVVXSRXSNYPVGXRVVAHKGWCDHYVFTPST 410
           RM +  P   A     A     F Y V  V+ S   +Y  G  +    GW ++ V TP T
Sbjct: 57  RMGKPDPSTAALAQAYAPGKPIFGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMT 116


>At5g01210.1 68418.m00026 transferase family protein contains Pfam
           profile PF02458 transferase family
          Length = 475

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -1

Query: 312 PLDN*XGRRVQLGKSCKPLIRVDADPFGFNEDLAVDQRRXNKFD 181
           PL N  G  + +G S  P   +  + FG+ + LAV     NKFD
Sbjct: 388 PLGNPDGASITMGSS--PRFPMYDNDFGWGKPLAVRSGGANKFD 429


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,336,021
Number of Sequences: 28952
Number of extensions: 115302
Number of successful extensions: 171
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 171
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 858708096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)