Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0700
         (658 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.9  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   6.7  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   6.7  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
 Frame = +2

Query: 581 YSMSSILIXNFXNNVY--PTCDIRYKF 655
           Y  SS L  +   +++  PTCD+ Y+F
Sbjct: 549 YCWSSFLKISVLQSLWASPTCDLMYEF 575


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 459 YNFFDI*PXTILPXXTKGLMTXQYC 533
           Y+ F +    ILP     LM  QYC
Sbjct: 175 YSLFIVFMTVILPYFINLLMELQYC 199


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 459 YNFFDI*PXTILPXXTKGLMTXQYC 533
           Y+ F +    ILP     LM  QYC
Sbjct: 175 YSLFIVFMTVILPYFINLLMELQYC 199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,777
Number of Sequences: 336
Number of extensions: 2353
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)