Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0700
         (658 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81464-1|CAE17676.1|  131|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AF024502-5|AAB70376.1|  456|Caenorhabditis elegans Hypothetical ...    27   8.9  
AC024843-5|AAK70666.3|  740|Caenorhabditis elegans Hypothetical ...    27   8.9  

>Z81464-1|CAE17676.1|  131|Caenorhabditis elegans Hypothetical
           protein B0462.4 protein.
          Length = 131

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -2

Query: 432 FKRISSTKIHYKRTSPRCTSANKSVFPVNGYGEVEAVPSLTLQ 304
           F + S+ K +Y+R S   T++N S+    G  +V  +P+ T+Q
Sbjct: 31  FSKFSTAK-NYRRPSTESTTSNHSIHIPVGVDDVPVLPTSTMQ 72


>AF024502-5|AAB70376.1|  456|Caenorhabditis elegans Hypothetical
           protein M151.5 protein.
          Length = 456

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +1

Query: 166 DRISGARSAELRVHIRDIREGSLHRRQRRIPIVKSG-GVGQKFVKLKLK 309
           D +SG + A   VHI  ++  SL  R   IP V  G G  Q  +K+++K
Sbjct: 196 DALSGTKRAPNLVHINVMQTTSLTLRTGSIPDVNFGFGPHQSTLKVEMK 244


>AC024843-5|AAK70666.3|  740|Caenorhabditis elegans Hypothetical
           protein Y61A9LA.8 protein.
          Length = 740

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -3

Query: 293 TNFCPTPPDLTIGIRRCRLCSDPSRISRICTR 198
           T  C   P+ T GIR C     P R  R CT+
Sbjct: 522 TTNCKNFPNCTFGIR-CLFIHPPCRFDRFCTK 552


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,926,373
Number of Sequences: 27780
Number of extensions: 223834
Number of successful extensions: 589
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)