Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0693
(672 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase Wis1|Schizosaccha... 30 0.35
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 29 0.61
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 28 1.1
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 27 1.9
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 27 2.5
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 27 2.5
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 27 2.5
SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyce... 27 2.5
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 25 7.5
SPBC15D4.04 |gpt2|gpt, alg7|UDP-N-acetylglucosamine--dolichyl-ph... 25 7.5
SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces ... 25 7.5
SPCC63.04 |mok14||alpha-1,3-glucan synthase Mok14|Schizosaccharo... 25 9.9
SPAC22H10.06c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 25 9.9
>SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase
Wis1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 605
Score = 29.9 bits (64), Expect = 0.35
Identities = 23/77 (29%), Positives = 30/77 (38%)
Frame = +3
Query: 261 SGRGHDSKPSNTPGPNAYDPHLLDNTPTFTFSGRGHDSKPSDTPGPNAYDPHLMDGTPKY 440
SG +DSK S+ DP L PT GR S+ ++ + DP
Sbjct: 61 SGSDNDSKVSSPSREIPSDPPLPRAVPTVRL-GRSTSSRSRNSLNLDMKDPSEKPRRSLP 119
Query: 441 TMGGRGPSGKPSENPGP 491
T G+ G P PGP
Sbjct: 120 TAAGQNNIGSPPTPPGP 136
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 29.1 bits (62), Expect = 0.61
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = -1
Query: 237 WKMRIVGIRAWSVRWLTVVTSTTKSKFMCIVWKMRIVGIRAWSVRWLTVVTSTSN 73
WKM + + W+ ++ + K + W + + G+ S RWL ++ TSN
Sbjct: 2180 WKMLTIAFFLFLSMWIIMLMFLGR-KSLTHSWLLPVFGVGLGSPRWLQMMWGTSN 2233
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 28.3 bits (60), Expect = 1.1
Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Frame = +3
Query: 261 SGRGHDSKPSNTPGPNAYDPHLLDNTPTFTFSGRGHDSKPSDTPGPNAYDPHLMDGTPKY 440
S G+ + P+ P +Y P +PT S +P +A P +P Y
Sbjct: 1561 SSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSY 1620
Query: 441 --TMGGRGPSGKPSENPGPNAYDP 506
T P+ PS +P +Y P
Sbjct: 1621 SPTSPSYSPT-SPSYSPTSPSYSP 1643
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 27.5 bits (58), Expect = 1.9
Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 5/78 (6%)
Frame = +3
Query: 288 SNTPGPNAYDPHLLDNTPT-FTFSGRGHDSKPSDTPGPNAYDPHLMDGT--PKYTMGGRG 458
S+ P P Y+P N PT F G ++ P N Y P DG P +
Sbjct: 651 SDAPYPGYYNPAQFQNAPTNFPMPTYGGRTQDQSYPRQNGY-PSYSDGNVYPHDRVMINY 709
Query: 459 PSGKPSENP--GPNAYDP 506
S P+ N PN Y P
Sbjct: 710 GSSMPTANGFYVPNTYSP 727
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 27.1 bits (57), Expect = 2.5
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 201 VRWLTVVTSTTKSKFMCIVWK 139
+ + T+ TTK+K +C +WK
Sbjct: 210 IEFATITKDTTKNKMVCKIWK 230
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 27.1 bits (57), Expect = 2.5
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +3
Query: 402 AYDPH--LMDGTPKYTMGGRGPSGKPSEN 482
A DP ++DGTPK RG S +PS N
Sbjct: 327 AADPSNGVVDGTPKLNSNTRGSSKRPSVN 355
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 27.1 bits (57), Expect = 2.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 591 YAFGAGTSDVFKSWPFPYKEYLG 523
+ F +G+SD K W FP ++G
Sbjct: 344 FTFASGSSDNIKHWKFPEGAFMG 366
>SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 568
Score = 27.1 bits (57), Expect = 2.5
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -2
Query: 554 HGLSHIKNILENYLVMRIIGIWPGIFRRLSRWPSXSH 444
HG + L +L + G+WPG+ +SRW H
Sbjct: 181 HGNAQSYVALRFFLGVAESGLWPGLAYYMSRWYRGKH 217
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 25.4 bits (53), Expect = 7.5
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -1
Query: 237 WKMRIVGIRAWSVRWLTVVTSTTK-SKFMCIVWKMRIVGIRAWSVRWLTVVTSTSN 73
W M ++ I + W+ +V S++ W + I+G+ + RWL + TSN
Sbjct: 2219 WAMFLLVILFYVAIWIALVALLASLSRYHS--WILPILGLGFGAPRWLQTLWGTSN 2272
>SPBC15D4.04 |gpt2|gpt,
alg7|UDP-N-acetylglucosamine--dolichyl-phosphateN-
acetylglucosaminephosphotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 446
Score = 25.4 bits (53), Expect = 7.5
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = -2
Query: 533 NILENYLVMRIIGIWPGIFRRLSRWPS-----XSHCIFRSSVHQMRIVGI 399
++L YLV+ +IG+ G+ + + WPS + C F V M +VGI
Sbjct: 255 HLLSLYLVLPLIGVTAGLL-KYNWWPSRVFVGDTFCYFAGMV--MAVVGI 301
>SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 325
Score = 25.4 bits (53), Expect = 7.5
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +3
Query: 264 GRGHDSKPSNTPGPNAYDPHLLDNTPTFTFSGRGHDSKPSDTPGPNAYD 410
G+ ++ T Y + PT T+ R + PSDT G AYD
Sbjct: 154 GQSQYNQSRKTTQGGDYGEDYSQSYPTDTYGSR-QKATPSDTVGGGAYD 201
>SPCC63.04 |mok14||alpha-1,3-glucan synthase Mok14|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1369
Score = 25.0 bits (52), Expect = 9.9
Identities = 12/56 (21%), Positives = 26/56 (46%)
Frame = -1
Query: 240 VWKMRIVGIRAWSVRWLTVVTSTTKSKFMCIVWKMRIVGIRAWSVRWLTVVTSTSN 73
+WK+ ++ + WL + K W + ++G+ +++W+ V TSN
Sbjct: 1190 LWKIVVMTVSFLVGAWLIIFYVLRKLSNKH-TWMVPVLGLGFGAIKWMHVFWGTSN 1244
>SPAC22H10.06c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 93
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = -3
Query: 208 LECQMAXCRDLYHKK*IYVY-CL 143
+ C+ CRD++ K IYV+ CL
Sbjct: 1 MSCRYRICRDIWRGKCIYVFRCL 23
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,971,155
Number of Sequences: 5004
Number of extensions: 70974
Number of successful extensions: 166
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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