BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0693
(672 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49813-1|CAA89967.1| 247|Anopheles gambiae serine proteinase pr... 23 6.6
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 23 6.6
>Z49813-1|CAA89967.1| 247|Anopheles gambiae serine proteinase
protein.
Length = 247
Score = 23.4 bits (48), Expect = 6.6
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -2
Query: 344 CGCIIKKMRIVGIRPRSVRRF 282
CG +++RIVG RP V ++
Sbjct: 1 CGAANQEIRIVGGRPTGVNQY 21
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 23.4 bits (48), Expect = 6.6
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +3
Query: 258 ISGRGHDSKPSNTPGPNAYDPHLLDNTPTFTFSGRGHDSKPSDTPGPNAYDPHLMDGTP 434
+S H S S+ GP P ++ +TP+ + + K +D PG A H +P
Sbjct: 1338 LSQSSHHSSSSHG-GPT---PSIISHTPSLSSASGSIGPKSADQPGAAAGLHHQQPSSP 1392
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 765,244
Number of Sequences: 2352
Number of extensions: 18220
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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