Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0693
(672 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 35 0.061
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 34 0.080
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 31 0.75
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 31 0.75
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 2.3
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 2.3
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z69302-8|CAA93261.3| 420|Caenorhabditis elegans Hypothetical pr... 29 3.0
DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-lik... 29 3.0
AF016671-3|AAB66109.2| 205|Caenorhabditis elegans Collagen prot... 29 3.0
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 5.3
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 5.3
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 28 5.3
AL117205-8|CAB55167.1| 444|Caenorhabditis elegans Hypothetical ... 28 6.9
AL021474-5|CAA16307.2| 673|Caenorhabditis elegans Hypothetical ... 28 6.9
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 27 9.2
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 34.7 bits (76), Expect = 0.061
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Frame = +3
Query: 276 DSKPSNTPGPNAYDPH---LLDNTPTFTFSGRGHDSKPSDTPGPNAYDPHLMDGTPKYTM 446
D +PS + P DP P+ D KPS+ P P DP + +P
Sbjct: 186 DPQPSGSSSPGPVDPSDEPSPSGPPSPGPVDPSEDPKPSEPPSPGPVDPS-DEPSPSDPP 244
Query: 447 GGRGPSGKPSEN-PGP 491
G GP G P+ PGP
Sbjct: 245 GPPGPPGPPTRRPPGP 260
Score = 34.3 bits (75), Expect = 0.080
Identities = 27/78 (34%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Frame = +3
Query: 276 DSKPSNTPGPNAYDPHLLDNTPTFTFSGRGHDSKPSDTPGPNAYDPHLMDGTPKYTMG-G 452
D +PS P P DP D P+ S D +PS P P DP D P
Sbjct: 115 DPQPSGPPSPGPVDPS-EDPQPSVEPS---EDHQPSGPPSPGPVDPS-EDPQPSVEPSED 169
Query: 453 RGPSGKPSENPGPNAYDP 506
PSG PS P + DP
Sbjct: 170 PQPSGPPSPGPVDPSEDP 187
Score = 31.1 bits (67), Expect = 0.75
Identities = 26/77 (33%), Positives = 30/77 (38%)
Frame = +3
Query: 276 DSKPSNTPGPNAYDPHLLDNTPTFTFSGRGHDSKPSDTPGPNAYDPHLMDGTPKYTMGGR 455
D +PS P P DP D P+ + S D PSD P P+ G P
Sbjct: 169 DPQPSGPPSPGPVDPSE-DPQPSGSSSPGPVD--PSDEPSPS--------GPPSPGPVDP 217
Query: 456 GPSGKPSENPGPNAYDP 506
KPSE P P DP
Sbjct: 218 SEDPKPSEPPSPGPVDP 234
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 34.3 bits (75), Expect = 0.080
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
Frame = +3
Query: 270 GHDSKPS--NTPGPNAYDPHLLDNTPTFTFSGRGHDSKPSDTPGPNAYDPHLMDGTPKYT 443
G+D +P PGP+A + H+ F F + + PGP P G P
Sbjct: 110 GNDGRPGAPGAPGPDAPNEHVQPTPADFCFECPPGPAGNAGNPGPKG--PPGQPGAP--- 164
Query: 444 MGGRGPSGKPSENPGPNAYDP 506
G +GP+G+P P P
Sbjct: 165 -GEQGPNGRPGAPGAPGPQGP 184
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 31.1 bits (67), Expect = 0.75
Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = +3
Query: 279 SKPSNTPGPNAYDPHLLDNTPTF-TFSGRGHDSKPSDTPGPNAYDPHLMDGTPKYTMGGR 455
S PS +P +Y P +PT T+S P+ +P + P +P Y GG
Sbjct: 1657 SSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPT-SPTYSPTSPTYSPTSPSYESGGG 1715
Query: 456 GPSGKPSENPGPNAYDP 506
P +P Y P
Sbjct: 1716 YSPSSPKYSPSSPTYSP 1732
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 279 SKPSNTPGPNAYDPHLLDNTPTFTFSGRGHDSKPSDTPGPNAYDPHLMDGTPKYTMGGRG 458
S P+ TP Y+P +P S + + P+ +P +Y P +P+Y+
Sbjct: 1754 SSPTYTPSSPTYNP----TSPRGFSSPQYSPTSPTYSPTSPSYTP----SSPQYSPTSPT 1805
Query: 459 PSGKPSENPGPNA-YDP 506
+ PSE PG +A Y P
Sbjct: 1806 YTPSPSEQPGTSAQYSP 1822
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 31.1 bits (67), Expect = 0.75
Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = +3
Query: 279 SKPSNTPGPNAYDPHLLDNTPTF-TFSGRGHDSKPSDTPGPNAYDPHLMDGTPKYTMGGR 455
S PS +P +Y P +PT T+S P+ +P + P +P Y GG
Sbjct: 1664 SSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPT-SPTYSPTSPTYSPTSPSYESGGG 1722
Query: 456 GPSGKPSENPGPNAYDP 506
P +P Y P
Sbjct: 1723 YSPSSPKYSPSSPTYSP 1739
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 279 SKPSNTPGPNAYDPHLLDNTPTFTFSGRGHDSKPSDTPGPNAYDPHLMDGTPKYTMGGRG 458
S P+ TP Y+P +P S + + P+ +P +Y P +P+Y+
Sbjct: 1761 SSPTYTPSSPTYNP----TSPRGFSSPQYSPTSPTYSPTSPSYTP----SSPQYSPTSPT 1812
Query: 459 PSGKPSENPGPNA-YDP 506
+ PSE PG +A Y P
Sbjct: 1813 YTPSPSEQPGTSAQYSP 1829
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.5 bits (63), Expect = 2.3
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 10/92 (10%)
Frame = +3
Query: 261 SGRGHDSKPSNTPGPNAY---DPHLLDNTPTFTFSGRGHDSKPSDTPGPN-------AYD 410
+G G + P ++ P+A D ++ T T G S PSDTP P+ +
Sbjct: 648 AGPGPSATPDSSTIPSASAAADAQTTTSSETST-PGEPTSSTPSDTPAPSTSVPPPTSVQ 706
Query: 411 PHLMDGTPKYTMGGRGPSGKPSENPGPNAYDP 506
P P+ G GP P PG Y P
Sbjct: 707 PPQPQQPPQGPPGPPGPQQHPGPYPGYPGYGP 738
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/73 (27%), Positives = 27/73 (36%)
Frame = +3
Query: 291 NTPGPNAYDPHLLDNTPTFTFSGRGHDSKPSDTPGPNAYDPHLMDGTPKYTMGGRGPSGK 470
N P PN P+ + G + PSD PN P+ K + G P+G
Sbjct: 956 NKPSPNGPSPNGPNGPSDPNKPGPSGPNGPSD---PNKPSPNGPSDPVKPSPSGPSPNGP 1012
Query: 471 PSENPGPNAYDPH 509
P PN P+
Sbjct: 1013 SPNGPSPNGPSPN 1025
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 SGRGHDSKPS-NTPGPNAYDPHLLDNTPTFTFSGRGHDSKPSDTPGPNAYDPHLMDGTPK 437
+G +KPS N P PN + N P SG S P+ P PN +
Sbjct: 950 NGPSDPNKPSPNGPSPNGPNGPSDPNKPGP--SGPNGPSDPNK-PSPNGPSDPVKPSPSG 1006
Query: 438 YTMGGRGPSGKPSENPGPNAYDPH 509
+ G P+G P PN P+
Sbjct: 1007 PSPNGPSPNGPSPNGPSPNGPSPN 1030
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 29.1 bits (62), Expect = 3.0
Identities = 23/77 (29%), Positives = 27/77 (35%), Gaps = 4/77 (5%)
Frame = +3
Query: 285 PSNTPGPNAYDPHLLDNTPTFTFSGRGHDSKPSDTPGPNAY--DPHLMDGTPKYTMGGRG 458
P TPGP + + P G P GP DP +M + G G
Sbjct: 218 PRGTPGPTGPKNFYITSGPPGPPGPPGPPGNPGGI-GPRGPPGDPGIMTQDSRGVEGPSG 276
Query: 459 PSGKPSEN--PGPNAYD 503
PSG P PGP D
Sbjct: 277 PSGPPGPMGFPGPKGID 293
>Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +3
Query: 348 TFSGRGHDSKPSDTPGPNAYDPHLMDGTPKYTMGGRGPSGKPSENPGPN 494
TFS S PG + + G P T+GG P G P + PG N
Sbjct: 82 TFSDVPQRQAGSLAPGVPIGNTSVSIGEPANTLGGGLPGGAPGQLPGGN 130
>Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +3
Query: 348 TFSGRGHDSKPSDTPGPNAYDPHLMDGTPKYTMGGRGPSGKPSENPGPN 494
TFS S PG + + G P T+GG P G P + PG N
Sbjct: 82 TFSDVPQRQAGSLAPGVPIGNTSVSIGEPANTLGGGLPGGAPGQLPGGN 130
>Z69302-8|CAA93261.3| 420|Caenorhabditis elegans Hypothetical
protein F40F8.5 protein.
Length = 420
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +1
Query: 79 GRGHDSKPSDTPGPNAYDPHLPDNTHKFTFCGRGHDSXPSDT 204
G H + SD PN DP++ H R HD PSDT
Sbjct: 226 GHNHRRRRSDDHDPN--DPNVDHIGHNHHRRKRNHDDDPSDT 265
>DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-like
protein.
Length = 1010
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +3
Query: 348 TFSGRGHDSKPSDTPGPNAYDPHLMDGTPKYTMGGRGPSGKPSENPGPN 494
TFS S PG + + G P T+GG P G P + PG N
Sbjct: 90 TFSDVPQRQAGSLAPGVPIGNTSVSIGEPANTLGGGLPGGAPGQLPGGN 138
>AF016671-3|AAB66109.2| 205|Caenorhabditis elegans Collagen protein
72 protein.
Length = 205
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = +3
Query: 297 PGPNAYDPHLLDNTPTFTFSGRGHDSKPSDTPGPNAYDPHLMDGTPKYTMGGRGPSGKPS 476
PG N +N P G + +P GP + + G+ K + G +GP+G P
Sbjct: 76 PGQNGNGGRPGNNGPMGQPGEPGREGQPGKAGGPGSPGRDGIRGS-KGSTGDKGPNGPPG 134
Query: 477 ENPGP 491
+N P
Sbjct: 135 QNGPP 139
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Frame = +3
Query: 363 GHDSKPSDTPGPNAY-----DPHLMDGTP-KYTMGGRGPSGKPSENPG 488
G P D PN+ P+ G P K GG GP+GKP N G
Sbjct: 45 GGQPTPGDAGNPNSQAGDSGKPNPPAGDPTKLKPGGGGPAGKPGPNAG 92
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +1
Query: 100 PSDTPGPNAYDPHLPDNTHKFTFCGRGHDSXPSDTPGPNAYDP 228
P+ PGPNA D P N+ RG D P+ P P A DP
Sbjct: 83 PAGKPGPNAGDTTKP-NSQSGDPKPRGGD--PAGKPNPPAGDP 122
>Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical
protein F48C11.2 protein.
Length = 708
Score = 28.7 bits (61), Expect = 4.0
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Frame = +3
Query: 282 KPSNTPGPNAYDPHLLDNTPTFTFSGRGHDSKPSD-TPGPNAYDPHLMDGT--PKYTMGG 452
KP+N +DP L + P +G+ ++ P T P A + +G P
Sbjct: 513 KPNNASNNEEFDPSGLRSPPIP--AGKPNNGTPKRMTFSPIADESEEENGARIPSPPRER 570
Query: 453 RGPSGKPSENPGPN-----AYDPH 509
R G+P N GPN A DPH
Sbjct: 571 RASGGRPGNNDGPNLSPNAALDPH 594
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +3
Query: 378 PSDTPGPNAYDPHLMDGTPKYTMGGRGPSGKPSENPGPNAYDP 506
P+ PGP DGTP GG GP+G P+ GP P
Sbjct: 166 PAGPPGPPG-----PDGTPGEP-GGPGPAGSPAGPSGPGPAGP 202
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +3
Query: 255 TISGRGHDSKPSNTPGPNAYDPHLLDNTPTFTFSGRGHDSKPSDTPGPNAYDPHLMDGTP 434
T++ ++ + S++P P+ D H T T T + +P D P D H+++ +
Sbjct: 4752 TVTEERYEPEDSHSPVPSEDDVHGFVKTTTTTTTVTHEHFEPEDPPS----DEHVVE-SE 4806
Query: 435 KYTMGGRGPSGKPS 476
+Y G PS + S
Sbjct: 4807 RYASGSPVPSEEDS 4820
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +3
Query: 255 TISGRGHDSKPSNTPGPNAYDPHLLDNTPTFTFSGRGHDSKPSDTPGPNAYDPHLMDGTP 434
T++ ++ + S++P P+ D H T T T + +P D P D H+++ +
Sbjct: 4752 TVTEERYEPEDSHSPVPSEDDVHGFVKTTTTTTTVTHEHFEPEDPPS----DEHVVE-SE 4806
Query: 435 KYTMGGRGPSGKPS 476
+Y G PS + S
Sbjct: 4807 RYASGSPVPSEEDS 4820
>AL117205-8|CAB55167.1| 444|Caenorhabditis elegans Hypothetical
protein Y116A8A.9 protein.
Length = 444
Score = 27.9 bits (59), Expect = 6.9
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Frame = +3
Query: 375 KPSDTPGPNAYDPHLMDGTPKYTMGGRGPSGKPSE-NPGPNAYDPHY*IVLQDILYMGKA 551
KP D P+ PH +D +P Y G G E N A D Y V QD +A
Sbjct: 80 KPIDEQFPDGKFPHGIDESPYYLKGKDGRVATDRESNEEKKALDISYEEVWQDYRRSAEA 139
Query: 552 --MI*KHQMYLLRMHMILTYLMEHLNT 626
+ K+ ++ M + + E L T
Sbjct: 140 HRQVRKYVKSWIKPGMTMIEICERLET 166
>AL021474-5|CAA16307.2| 673|Caenorhabditis elegans Hypothetical
protein Y32F6A.2 protein.
Length = 673
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = -1
Query: 156 MCIVWKMRIVGIRAWSVRWLTVVTSTSNSKFXCXVWK 46
MC + R + + W++ LT+ T S S + W+
Sbjct: 162 MCFIMVFRTISLSVWAIYDLTIFTHASQSIWSTSPWE 198
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 27.5 bits (58), Expect = 9.2
Identities = 25/76 (32%), Positives = 28/76 (36%)
Frame = +3
Query: 264 GRGHDSKPSNTPGPNAYDPHLLDNTPTFTFSGRGHDSKPSDTPGPNAYDPHLMDGTPKYT 443
G+G P+ PGP P G G D PGP P DGTP
Sbjct: 213 GKGEPG-PAGPPGPPG------PGGPPGDAGGAGSDG----APGPQG--PPGQDGTP--- 256
Query: 444 MGGRGPSGKPSENPGP 491
G GP G+P GP
Sbjct: 257 -GNAGPDGQPGSPGGP 271
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,548,576
Number of Sequences: 27780
Number of extensions: 424177
Number of successful extensions: 1164
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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