Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0693
(672 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g10270.1 68418.m01192 cyclin-dependent kinase, putative / CDK... 31 0.92
At2g37150.2 68415.m04558 zinc finger (C3HC4-type RING finger) fa... 30 1.2
At2g37150.1 68415.m04557 zinc finger (C3HC4-type RING finger) fa... 30 1.2
At5g56890.1 68418.m07099 protein kinase family protein contains ... 29 2.1
At1g77760.1 68414.m09053 nitrate reductase 1 (NR1) identical to ... 29 2.1
At5g16610.2 68418.m01945 expressed protein 29 2.8
At5g16610.1 68418.m01944 expressed protein 29 2.8
At5g48010.1 68418.m05933 pentacyclic triterpene synthase, putati... 29 3.7
At3g10600.1 68416.m01275 amino acid permease family protein simi... 29 3.7
At2g30970.1 68415.m03777 aspartate aminotransferase, mitochondri... 28 4.9
At3g07160.1 68416.m00853 glycosyl transferase family 48 protein ... 28 6.5
At5g42120.1 68418.m05128 lectin protein kinase family protein co... 27 8.6
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 27 8.6
At1g07990.1 68414.m00871 SIT4 phosphatase-associated family prot... 27 8.6
>At5g10270.1 68418.m01192 cyclin-dependent kinase, putative / CDK,
putative similar to cyclin dependent kinase C
[Lycopersicon esculentum] gi|15215944|emb|CAC51391
Length = 505
Score = 30.7 bits (66), Expect = 0.92
Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +3
Query: 261 SGRGHD--SKPSNTPGPNAYDPHLLDNTPTFTFSGRGHDSKPSDTPGPNAYDPHLMDGTP 434
+G H+ KP PGPN Y P+ SG + S+ + G +Y P G P
Sbjct: 409 AGPSHNFYGKPRGPPGPNRY-------PPSGNQSGGYNQSRGGYSSG--SYPPQ-GRGAP 458
Query: 435 KYTMGGRGPSGKPSENPGPN 494
Y G RGPSG P PN
Sbjct: 459 -YVAGPRGPSGGPYGVGPPN 477
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Frame = +3
Query: 339 PTFTFSGRGHDSKPSDTPGPNAYDPHLMDGTPKYTMGGRGPS--GKPSENPGPNAYDP 506
P G+ H + P GPN H + P G + GKP PGPN Y P
Sbjct: 378 PPLQHGGQSH-AAPHWPAGPN----HPTNNAPPQVPAGPSHNFYGKPRGPPGPNRYPP 430
>At2g37150.2 68415.m04558 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 546
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 381 SDTPGPNAYDP--HLMDGTPKYTMGGRGPSGKPSENPG-PNAYDPH 509
+ +PGPNAY H ++ P Y G GPS PS N P PH
Sbjct: 63 NSSPGPNAYTDSGHSVE-RPHYNPGVSGPSHDPSVNSTVPTFSAPH 107
>At2g37150.1 68415.m04557 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 546
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 381 SDTPGPNAYDP--HLMDGTPKYTMGGRGPSGKPSENPG-PNAYDPH 509
+ +PGPNAY H ++ P Y G GPS PS N P PH
Sbjct: 63 NSSPGPNAYTDSGHSVE-RPHYNPGVSGPSHDPSVNSTVPTFSAPH 107
>At5g56890.1 68418.m07099 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 1113
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 7/80 (8%)
Frame = +3
Query: 273 HDSKPSNTPGP-----NAYDPHLLDNTPTFTFSGRGHDS--KPSDTPGPNAYDPHLMDGT 431
H + PS TP P N + + P + + H K +D+P P+ PHL+
Sbjct: 314 HHTSPSTTPPPDSTPSNVHHHPSSPSPPPLSSHHQHHQERKKIADSPAPSPLPPHLISPK 373
Query: 432 PKYTMGGRGPSGKPSENPGP 491
G P + P P
Sbjct: 374 KSNRKGSMTPPPQSHHAPSP 393
>At1g77760.1 68414.m09053 nitrate reductase 1 (NR1) identical to
SP|P11832 Nitrate reductase 1 (formerly EC 1.6.6.1)
(NR1){Arabidopsis thaliana}
Length = 917
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +1
Query: 145 DNTHKFTFCGRGHDSXPSDTPGPNAYDPHLPDNTHKLLFLVEVTIV 282
DN H T G H P P P ++D H N + L E IV
Sbjct: 6 DNRHYPTMNGVAHAFKPPLVPSPRSFDRHRHQNQTLDVILTETKIV 51
>At5g16610.2 68418.m01945 expressed protein
Length = 673
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = -2
Query: 560 LNHGLSHIKNILENYLVMRIIG--IWPGIFRRLSRWPSXSHCIFRSSVHQMRIVGIRAWS 387
LN S +++++ R G + F + SR C+F S + Q R + R W
Sbjct: 452 LNESFSELEDVISQLFYKRETGTKLLNSSFSKASRTSYCLTCLF-SLIEQARYLQFRKWP 510
Query: 386 VRW 378
V W
Sbjct: 511 VEW 513
>At5g16610.1 68418.m01944 expressed protein
Length = 529
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = -2
Query: 560 LNHGLSHIKNILENYLVMRIIG--IWPGIFRRLSRWPSXSHCIFRSSVHQMRIVGIRAWS 387
LN S +++++ R G + F + SR C+F S + Q R + R W
Sbjct: 308 LNESFSELEDVISQLFYKRETGTKLLNSSFSKASRTSYCLTCLF-SLIEQARYLQFRKWP 366
Query: 386 VRW 378
V W
Sbjct: 367 VEW 369
>At5g48010.1 68418.m05933 pentacyclic triterpene synthase, putative
similar to pentacyclic triterpene synthase [gi:6650207]
[PMID: 11247608] Contains Pfam domain PF00432:
Prenyltransferase and squalene oxidase repeat
Length = 758
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 471 PSENPGPNAYDPHY*IVLQDILYMGKAMI*KHQMYLLR 584
P+EN GPN Y P + I L ++ K +H LLR
Sbjct: 117 PAENSGPNFYTPPFLICLYITGHLEKIFTPEHVKELLR 154
>At3g10600.1 68416.m01275 amino acid permease family protein similar
to SP|Q09143 High-affinity cationic amino acid
transporter-1 (CAT-1) {Mus musculus}; contains Pfam
profile PF00324: Amino acid permease
Length = 584
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -1
Query: 237 WKMRIVGIRA-WSVRWLTVVTSTTKSKFMCIVWKMRIVGI 121
W R+VGI A + + +V ++++MC++ + R+V I
Sbjct: 342 WVTRVVGIGASFGILTSLIVAMLGQARYMCVIGRSRVVPI 381
>At2g30970.1 68415.m03777 aspartate aminotransferase, mitochondrial
/ transaminase A (ASP1) identical to SP|P46643 Aspartate
aminotransferase, mitochondrial precursor (EC 2.6.1.1)
(Transaminase A) {Arabidopsis thaliana}
Length = 430
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -3
Query: 391 GVSDGLLS*PLPEKVNVGV 335
GV++ L+ P PEKVNVGV
Sbjct: 46 GVTEAFLADPSPEKVNVGV 64
>At3g07160.1 68416.m00853 glycosyl transferase family 48 protein
similar to glucan synthase GB:AAD11794 [Filobasidiella
neoformans var. neoformans]
Length = 1931
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 537 KEYLGELFSNEDHRHLARDFPKAFQMALXLPL 442
++ LGE+ S E L +FP AF AL +PL
Sbjct: 771 RDRLGEIRSLEAIHKLFEEFPGAFMRALHVPL 802
>At5g42120.1 68418.m05128 lectin protein kinase family protein
contains Pfam domains PF00139: Legume lectins beta
domain and PF00069: Protein kinase domain
Length = 691
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 651 LGCXLPPSVYLGVPSSK*GSYAFGAGTSDV 562
+G P VY GVPS K Y+FG +V
Sbjct: 543 MGYLAPEYVYTGVPSEKTDVYSFGVVVLEV 572
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 27.5 bits (58), Expect = 8.6
Identities = 25/76 (32%), Positives = 34/76 (44%)
Frame = +3
Query: 270 GHDSKPSNTPGPNAYDPHLLDNTPTFTFSGRGHDSKPSDTPGPNAYDPHLMDGTPKYTMG 449
G PS TPGP++ P ++P G S P TPGP++ P +P
Sbjct: 203 GPPPSPSPTPGPDSPLPSPGPDSP-LPLPGPPPSSSP--TPGPDSPLP-----SP----- 249
Query: 450 GRGPSGKPSENPGPNA 497
GP PS PGP++
Sbjct: 250 --GPPPSPSPTPGPDS 263
>At1g07990.1 68414.m00871 SIT4 phosphatase-associated family protein
contains Pfam profile: PF04499 SIT4
phosphatase-associated protein
Length = 802
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +3
Query: 324 LLDNTPTFTFSGRGHDSKPSDTPGPNAYDPHL 419
L N+ FTF S PSDT G N D L
Sbjct: 575 LFTNSNWFTFQDDRFGSTPSDTAGSNTIDVEL 606
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,658,037
Number of Sequences: 28952
Number of extensions: 391951
Number of successful extensions: 973
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1422784080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -