Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0692
         (771 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    25   2.6  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   4.5  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   6.0  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   7.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   7.9  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 13/67 (19%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = +2

Query: 263  QQTDTENKEKIENEDQEMKDVSEKADSKPVDDEKVILDF-KEDDDLSYVTQDMFPSYSTE 439
            +Q   ++KEK+ ++ +E+K    + D     ++++ L+  K++++++ V  +    Y   
Sbjct: 870  KQQIKQHKEKMNSQSKELKAKYHQRDKLLKQNDELKLEIKKKENEITKVRNENKDGYDRI 929

Query: 440  RGVGQSF 460
             G+ Q +
Sbjct: 930  SGMEQKY 936


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +3

Query: 9   YLHPFCNTCHKELPTRIELDEHRLTAEHLRAIQDKQDVLSKPKPE 143
           ++ P C T HK   TR++L  ++LT+  ++A++ +     K  PE
Sbjct: 665 HVEPHCFT-HKTNLTRVDLYANQLTSLDIKALRLQPVPEDKQIPE 708


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +2

Query: 254 TDEQQTDTENKEKIENEDQEMK-DVSEK 334
           +DE Q D ++KE+ E E + +K  ++EK
Sbjct: 313 SDEVQGDNKSKERAEQELERLKITIAEK 340


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 155  NHQHFRLGL*KYILFILNCTQMFSS 81
            NHQHF  G  +Y L  +  T   SS
Sbjct: 2422 NHQHFYTGFRRYRLEYVKNTNKISS 2446


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 155  NHQHFRLGL*KYILFILNCTQMFSS 81
            NHQHF  G  +Y L  +  T   SS
Sbjct: 2423 NHQHFYTGFRRYRLEYVKNTNKISS 2447


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,096
Number of Sequences: 2352
Number of extensions: 12486
Number of successful extensions: 42
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)