Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0692
(771 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 35 0.068
At2g36420.1 68415.m04471 expressed protein 33 0.21
At4g00830.1 68417.m00114 RNA recognition motif (RRM)-containing ... 32 0.36
At2g28360.1 68415.m03447 SIT4 phosphatase-associated family prot... 31 0.64
At1g56660.1 68414.m06516 expressed protein 31 0.84
At2g22080.1 68415.m02622 expressed protein 31 1.1
At3g47270.1 68416.m05135 hypothetical protein similar to At2g049... 30 1.5
At5g61000.1 68418.m07652 replication protein, putative similar t... 29 2.6
At5g08020.1 68418.m00933 replication protein, putative similar t... 29 2.6
At4g16050.1 68417.m02435 expressed protein 29 2.6
At1g08600.1 68414.m00953 SNF2 domain-containing protein / helica... 29 2.6
At5g63740.1 68418.m08000 zinc finger protein-related 29 3.4
At2g43190.3 68415.m05368 ribonuclease P family protein similar t... 29 3.4
At2g43190.2 68415.m05367 ribonuclease P family protein similar t... 29 3.4
At2g32360.1 68415.m03955 ubiquitin family protein contains INTER... 29 3.4
At3g02810.1 68416.m00273 protein kinase family protein contains ... 29 4.5
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 28 5.9
At5g16030.1 68418.m01874 expressed protein 28 5.9
At3g19370.1 68416.m02457 expressed protein 28 5.9
At1g17690.1 68414.m02190 expressed protein 28 5.9
At5g64030.1 68418.m08039 dehydration-responsive protein-related ... 28 7.9
At5g60030.1 68418.m07527 expressed protein 28 7.9
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 28 7.9
At5g42310.1 68418.m05149 pentatricopeptide (PPR) repeat-containi... 28 7.9
At3g58840.1 68416.m06558 expressed protein 28 7.9
At3g04260.1 68416.m00450 SAP domain-containing protein contains ... 28 7.9
At1g65440.1 68414.m07424 glycine-rich protein 28 7.9
At1g06530.1 68414.m00692 myosin heavy chain-related similar to m... 28 7.9
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 34.7 bits (76), Expect = 0.068
Identities = 22/71 (30%), Positives = 38/71 (53%)
Frame = +2
Query: 254 TDEQQTDTENKEKIENEDQEMKDVSEKADSKPVDDEKVILDFKEDDDLSYVTQDMFPSYS 433
+DE D++++ +E+ED++ +D + S D E +I D EDDD Y ++ +
Sbjct: 162 SDENHEDSDDEYVVEDEDEDNED--DDVKSLTSDVENLIGDSDEDDD-DYGDENAYYGGK 218
Query: 434 TERGVGQSFLT 466
+RG QS T
Sbjct: 219 RKRGKKQSKYT 229
>At2g36420.1 68415.m04471 expressed protein
Length = 439
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 257 DEQQTDTENKEKIENEDQEMKDVSEKADSKPVDDEKVILDFKEDDD 394
DE +TE+ EK+ +++E K+ +K PV + + +ED+D
Sbjct: 222 DEDSDETESLEKVRGQEEEDKEEEDKEQCSPVSVLDPLEEEEEDED 267
>At4g00830.1 68417.m00114 RNA recognition motif (RRM)-containing
protein similar to nucleolin protein; contains InterPro
entry IPR000504: RNA-binding region RNP-1 (RNA
recognition motif) (RRM)
Length = 495
Score = 32.3 bits (70), Expect = 0.36
Identities = 13/46 (28%), Positives = 28/46 (60%)
Frame = +2
Query: 257 DEQQTDTENKEKIENEDQEMKDVSEKADSKPVDDEKVILDFKEDDD 394
+E++ + ++ + + N++ E ++V + D+K D E V + EDDD
Sbjct: 34 EEEEEEDDDDDDVGNQNAEEREVEDYGDTKGGDMEDVQEEIAEDDD 79
>At2g28360.1 68415.m03447 SIT4 phosphatase-associated family protein
contains Pfam profile: PF04499 SIT4
phosphatase-associated protein
Length = 826
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +2
Query: 302 EDQEMKDVSEKADSKPVDDEKVILDFKEDDDLSYVTQDMFPS 427
ED M + + DS DDE ++++ +EDDDL+ ++++ PS
Sbjct: 640 EDVNMNETTNANDSSSSDDE-LLVEEEEDDDLTEKSKNISPS 680
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 257 DEQQTDTENKEKIENEDQEMKDVSEKADSKPVDDEKVILDFKEDDD 394
D ++ D E K++ + DQEMK+ K + K DE + K+ D
Sbjct: 223 DLEKEDEEKKKEHDETDQEMKEKDSKKNKKKEKDESCAEEKKKKPD 268
>At2g22080.1 68415.m02622 expressed protein
Length = 177
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +2
Query: 257 DEQQTDTENKEKIENEDQEMKDVSEKADSKPVDDEKVI 370
DE++ + EN + E +D E +V E+ + + DDE+ +
Sbjct: 132 DEEEDEDENDDGGEEDDDEDAEVEEEEEEEDEDDEEAL 169
>At3g47270.1 68416.m05135 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At2g14140, At3g30450, At4g03990,
At5g34895, At2g02200
Length = 671
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/47 (23%), Positives = 27/47 (57%)
Frame = +2
Query: 254 TDEQQTDTENKEKIENEDQEMKDVSEKADSKPVDDEKVILDFKEDDD 394
T++Q+ + E++E E+ + ++V E + +D+K + +D+D
Sbjct: 415 TEKQENPKQGDEEMEREEGKEENVEEHDEHDETEDQKAYVILSDDED 461
>At5g61000.1 68418.m07652 replication protein, putative similar to
replication protein A1 [Oryza sativa] GI:2258469;
contains InterPro entry IPR004365: OB-fold nucleic acid
binding domain
Length = 629
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +2
Query: 257 DEQQTDTENKEKIENEDQEMKDVSEKADSKPVDDEKVILDFKEDDDLSYVTQDMFPSYST 436
D + T EN E E +EM K + P+++ + ++ KE DL V Q + P+ S
Sbjct: 273 DYEMTLNENSEVEEASSEEMFIPETKFNFVPIEELGLYVNQKELIDLIGVVQSVSPTMSI 332
Query: 437 ER 442
R
Sbjct: 333 RR 334
>At5g08020.1 68418.m00933 replication protein, putative similar to
replication protein A1 [Oryza sativa] GI:2258469;
contains InterPro entry IPR004365: OB-fold nucleic acid
binding domain
Length = 604
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +2
Query: 257 DEQQTDTENKEKIENEDQEMKDVSEKADSKPVDDEKVILDFKEDDDLSYVTQDMFPSYST 436
D + T EN E E ++EM K + P+D+ ++ K+ D+ V Q + P+ S
Sbjct: 249 DYEMTLNENSEVEEASNEEMFTPETKFNFVPIDELGTYVNQKDLIDVIGVVQSVSPTMSI 308
Query: 437 ER 442
R
Sbjct: 309 RR 310
>At4g16050.1 68417.m02435 expressed protein
Length = 666
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 257 DEQQTDTENKEKIENEDQEMKDVSEKADSKPVDDEKVIL 373
DE +TE+ E + ED E D + ++ DD+ + +
Sbjct: 509 DESAAETEDDESADTEDDESADTEDDESAETEDDDNMTI 547
>At1g08600.1 68414.m00953 SNF2 domain-containing protein / helicase
domain-containing protein similar to SP|P46100
Transcriptional regulator ATRX {Homo sapiens}; contains
PFam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain;
non-consensus GC donor splice site at exon boundary
28614
Length = 1457
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/40 (32%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = +2
Query: 278 ENKEKIENEDQEMKDVSEKADSKPV--DDEKVILDFKEDD 391
EN + E +D+EM+D S +++S D+++ IL ++D+
Sbjct: 62 ENNNQGEQKDEEMQDASSRSESSDFNSDEDEQILSRRDDE 101
>At5g63740.1 68418.m08000 zinc finger protein-related
Length = 226
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/46 (26%), Positives = 28/46 (60%)
Frame = +2
Query: 257 DEQQTDTENKEKIENEDQEMKDVSEKADSKPVDDEKVILDFKEDDD 394
DE + + E+++ +++D + D ++ AD DD++ + ++DDD
Sbjct: 80 DEDEDEDEDEDDDDDDDDDDDDDADDADDDEDDDDEDDDEDEDDDD 125
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +2
Query: 257 DEQQTDTENKEKIENEDQEMKDVSEKADSKPVDDEKVILDFKEDDD 394
DE + + ++ + +++D + D + D DD++ D +DDD
Sbjct: 84 DEDEDEDDDDDDDDDDDDDADDADDDEDDDDEDDDEDEDDDDDDDD 129
>At2g43190.3 68415.m05368 ribonuclease P family protein similar to
Ribonuclease P protein subunit p29 (EC 3.1.26.5) (hPOP4)
(Swiss-Prot:O95707) [Homo sapiens]
Length = 295
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 260 EQQTDTENKEKIENEDQEMKDVSEKADSKPVDDEKVIL-DFKEDDDLSY 403
+QQ + ++K+ + D MK+ S +ADS P + I D K+DD ++Y
Sbjct: 33 QQQKNEKDKKGTSDVDVSMKE-SHQADSLPTPSKTSIKKDPKDDDSVAY 80
>At2g43190.2 68415.m05367 ribonuclease P family protein similar to
Ribonuclease P protein subunit p29 (EC 3.1.26.5) (hPOP4)
(Swiss-Prot:O95707) [Homo sapiens]
Length = 295
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 260 EQQTDTENKEKIENEDQEMKDVSEKADSKPVDDEKVIL-DFKEDDDLSY 403
+QQ + ++K+ + D MK+ S +ADS P + I D K+DD ++Y
Sbjct: 33 QQQKNEKDKKGTSDVDVSMKE-SHQADSLPTPSKTSIKKDPKDDDSVAY 80
>At2g32360.1 68415.m03955 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 175
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 296 ENEDQEMKDVSEKADSKPVDDEKVILDFKEDDDLSYVTQD 415
E EDQ MKD E D K +DE+ + ++D + YV ++
Sbjct: 124 EEEDQAMKDEEEDRDVKVEEDEEE-KEKEKDGEAKYVKEE 162
>At3g02810.1 68416.m00273 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 558
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 260 EQQTDTENKEKIENEDQEMKDVS-EKADSKPVDDEKVILDFKEDDD 394
++ D + KE+ E E+ E K E DS DD++ + F DDD
Sbjct: 491 DRDQDEKGKEEEEEEEAEEKHTHIEHIDSSKTDDDQSVY-FDNDDD 535
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 263 QQTDTENKE--KIENEDQEMKD-VSEKADSKPVDDEKVILDFKEDDDLSYVTQD 415
++ DTE+KE +E QE ++ V E+ + ++EK KEDD V ++
Sbjct: 316 EKVDTESKEVESVEETTQEKEEEVKEEGKERVEEEEKEKEKVKEDDQKEKVEEE 369
>At5g16030.1 68418.m01874 expressed protein
Length = 339
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 263 QQTDTENKEKIENEDQEMKDVSEKADSKPVDDEKVILDFKEDDD 394
QQ D + +EK +++E +D+S + D + ++EK D E+DD
Sbjct: 249 QQQDVKLEEK--EKEEEKQDMSNEEDEEEEEEEK--QDMSEEDD 288
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 260 EQQTDTENKEKIENEDQEMKDVSEKADSKPVDDEK 364
E++ E K+ + NE+ E ++ EK D DD++
Sbjct: 256 EEKEKEEEKQDMSNEEDEEEEEEEKQDMSEEDDKE 290
>At3g19370.1 68416.m02457 expressed protein
Length = 704
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 260 EQQTDTENKEKIENEDQEMKDVSEKADSK 346
E +T ENKEK+E E + K + E D+K
Sbjct: 503 EMKTLRENKEKVEAEMETEKSMKEDLDTK 531
>At1g17690.1 68414.m02190 expressed protein
Length = 754
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 257 DEQQTDTENKEKIENEDQEMKDVSEKADSKPVDDEK 364
+E ++DTE E E+ED+E S+ S +D+K
Sbjct: 88 EEGKSDTEEDEDDEDEDEEENSGSDDLSSTDGEDDK 123
>At5g64030.1 68418.m08039 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 829
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +2
Query: 254 TDEQQT--DTENKEKIENEDQEMKDVSEKADSKPVDDEKVILDFKEDDDLSYVTQDMFPS 427
T+E+QT +TE+ E E+ + + + S+ + K +DD+K DDD T +
Sbjct: 168 TNEKQTKPETEDNELGEDGENQKQFESDNGEKKSIDDDKK----SSDDDKENKTGNEDTE 223
Query: 428 YSTER 442
TE+
Sbjct: 224 TKTEK 228
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 257 DEQQTDTENKEKIENEDQEMKDVSEKADSKPVDDEKV 367
DE D + KEK+E+E + + EK + D+E V
Sbjct: 222 DEDVVDEKEKEKLEDEQRSGERKKEKKKKRKSDEEIV 258
>At5g55660.1 68418.m06940 expressed protein similar to unknown
protein (pir||T08929)
Length = 778
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 272 DTENKEKIENEDQEMKDVSEKADSKPVDDEKVILDFKEDDD 394
D + + K ENED+E + EK +S +DD++ + DDD
Sbjct: 237 DKKTESKDENEDKEEEKEDEKEES--MDDKEDEKEESNDDD 275
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = +2
Query: 254 TDEQQTDTENKEKIENEDQEMKDVSEKADSKPVDDEKVILDFKEDDDLSYVTQDMFPSYS 433
T+ + + + +E+ E+E +E D E + DD+K + +DD +D+ S
Sbjct: 240 TESKDENEDKEEEKEDEKEESMDDKEDEKEESNDDDKEDEKEESNDDKEDKKEDI--KKS 297
Query: 434 TERGVGQS 457
+RG G++
Sbjct: 298 NKRGKGKT 305
>At5g42310.1 68418.m05149 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 709
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = -1
Query: 252 YHYHHASLLEHHPCVVYADDAHTGMTAPCPKLKSSTFQAW 133
+H+HH P ++ + +P P SS F +W
Sbjct: 22 HHHHHHHRFFQPPISAFSATTSASLPSPSPSSSSSYFSSW 61
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 254 TDEQQTDTENKEKIENEDQEMKDVSEKADSKPVDDEKVILDFKED 388
T E + E E++ E +EMKDV + + + + EK I +++E+
Sbjct: 40 TRENRELKERLERLTGEIEEMKDVEAEMNQRFGEMEKEIEEYEEE 84
>At3g04260.1 68416.m00450 SAP domain-containing protein contains
Pfam domain PF02037: SAP domain
Length = 913
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 5/48 (10%)
Frame = +2
Query: 266 QTDTENKEKIEN-----EDQEMKDVSEKADSKPVDDEKVILDFKEDDD 394
+T E+KE E+ ++ ++D+S++AD++ DDE+ + EDDD
Sbjct: 625 ETSVESKETTESVVTGESEKAIEDISKEADNEEDDDEEE-QEGDEDDD 671
>At1g65440.1 68414.m07424 glycine-rich protein
Length = 1647
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 278 ENKEKIENEDQEMKDVSEKADSKPVDDEKVILDFKEDDDL 397
E++E+ E ED+E KD E+ K +K EDD L
Sbjct: 56 EDEEEEEEEDEERKDSDEERQKKKKKRKKKDEGLDEDDYL 95
>At1g06530.1 68414.m00692 myosin heavy chain-related similar to
myosin heavy chain (GI:1408194) {Placopecten
magellanicus}; similar to Myosin heavy chain, clone 203
(Fragment) (SP:P39922){Hydra attenuata}; contains one
transmembrane domain
Length = 323
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 266 QTDTENKEKIENEDQEMKDVSEKADSKPVDDEK 364
+ + E +EKI+N+++E+ D+ EK S D K
Sbjct: 190 RAEEEMREKIDNKEKEVHDLKEKIKSLESDVAK 222
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,086,044
Number of Sequences: 28952
Number of extensions: 261587
Number of successful extensions: 1196
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1716774400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -