Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0690
(699 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 41 1e-04
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 35 0.013
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 32 0.091
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 32 0.091
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 32 0.091
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 32 0.091
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 31 0.12
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 31 0.12
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 31 0.21
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 31 0.21
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 31 0.21
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 30 0.28
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 30 0.37
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 29 0.64
SPAC4F10.09c |||ribosome biogenesis protein Noc1 |Schizosaccharo... 29 0.85
SPAC23G3.10c |ssr3||SWI/SNF and RSC complex subunit Ssr3|Schizos... 27 2.0
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 27 2.0
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 27 2.0
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 27 2.6
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 27 2.6
SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit |Sch... 27 2.6
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 27 2.6
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 27 2.6
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 27 3.4
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 26 4.5
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 26 4.5
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 4.5
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 26 4.5
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 26 4.5
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 4.5
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 26 6.0
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 6.0
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 26 6.0
SPBC1709.02c |vas2|SPBC1734.18c|valine-tRNA ligase Vas2 |Schizos... 26 6.0
SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity prote... 26 6.0
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 26 6.0
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 25 7.9
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 25 7.9
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 25 7.9
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 25 7.9
SPBC29A3.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 25 7.9
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 41.1 bits (92), Expect = 1e-04
Identities = 21/90 (23%), Positives = 44/90 (48%)
Frame = +2
Query: 230 DPEQEQTGEANKDLEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEEXSGTAQQKLLEAQ 409
+ + E+ E K L K + E L+RKV+ +EE+LE +++ +K+ +
Sbjct: 54 ESQLEELEEETKQLRLKADNEDIQKTEAEQLSRKVELLEEELETNDKLLRETTEKMRQTD 113
Query: 410 QSADENNRMCKVLENRAQQDEERMXQLTNQ 499
A+ R + LE E+++ ++T++
Sbjct: 114 VKAEHFERRVQSLERERDDMEQKLEEMTDK 143
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 34.7 bits (76), Expect = 0.013
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 269 LEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEE 370
LEE K L + +V +L + +Q ++EDL KSEE
Sbjct: 670 LEESNKSLIKKQEDVDSLEKNIQTLKEDLRKSEE 703
Score = 26.6 bits (56), Expect = 3.4
Identities = 27/128 (21%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Frame = +2
Query: 275 EKEKQLTATEAEVAALNRKVQQIEEDLEKSE-EXSGTAQQKLLEAQQSADENNRMCKVLE 451
EKE ++ + +A L Q+E +L +S+ + + T ++ L + RM L+
Sbjct: 1570 EKESEILQFNSRLADLEYHKSQVESELGRSKLKLASTTEELQLAENERLSLTTRMLD-LQ 1628
Query: 452 NRAQQDEERMXQLTNQLXEPVSSPXTLTENPDXGFAKTGLSLKTNS-KSPKNRVXSGDAK 628
N+ + + + + L E + + +L ++ + +K+N+ +S ++ + S A+
Sbjct: 1629 NQVKD----LSNIKDSLSEDLRTLRSLEDS--VASLQKECKIKSNTVESLQDVLTSVQAR 1682
Query: 629 ISELEEEL 652
+ELE+E+
Sbjct: 1683 NAELEDEV 1690
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 31.9 bits (69), Expect = 0.091
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Frame = +2
Query: 230 DPEQEQTGEANKD--LEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEEXSGTAQQKLLE 403
D E +QT + ++ LEE + +L E E+ K+ E+DL+K E+ K+ E
Sbjct: 190 DSEGKQTLVSKREAALEEFQSKLLIRENEINKRELKMNGKEDDLKKREKDLENRLLKVEE 249
Query: 404 AQQSADEN-NRMCKVLE---NRAQQDEERMXQLTNQLXEPVSSPXTLTEN 541
++S +E ++ + E NR ++ EER Q E SS + T N
Sbjct: 250 HEKSLNERATKLSEANENFNNRFKEFEEREKSAIKQNKEQ-SSEGSKTAN 298
Score = 26.2 bits (55), Expect = 4.5
Identities = 29/146 (19%), Positives = 58/146 (39%)
Frame = +2
Query: 239 QEQTGEANKDLEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEEXSGTAQQKLLEAQQSA 418
+E+ + D E + +E + ++++ +EE K ++ L+
Sbjct: 171 KERINDLTYDYETLKANADDSEGKQTLVSKREAALEEFQSKLLIRENEINKRELKMNGKE 230
Query: 419 DENNRMCKVLENRAQQDEERMXQLTNQLXEPVSSPXTLTENPDXGFAKTGLSLKTNSKSP 598
D+ + K LENR + EE L E + EN + F + K+ K
Sbjct: 231 DDLKKREKDLENRLLKVEEH----EKSLNERATKLSEANENFNNRFKEFEEREKSAIKQN 286
Query: 599 KNRVXSGDAKISELEEELKVVGNSLK 676
K + G ++ E+ +++ NSL+
Sbjct: 287 KEQSSEGSKTANQTHEQKELI-NSLE 311
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 31.9 bits (69), Expect = 0.091
Identities = 23/67 (34%), Positives = 39/67 (58%)
Frame = +3
Query: 42 QQKAATMDAIKKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVE 221
QQ+ ++D I+K +Q NA+++ +Q+A L EK+N+ E K++ QVE
Sbjct: 492 QQEELSLDDIRKSLQGKTEGISNAIEE----KQKAMAPAL--EKINQLTSE--KQILQVE 543
Query: 222 EDLILNK 242
D++LNK
Sbjct: 544 LDMLLNK 550
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 31.9 bits (69), Expect = 0.091
Identities = 20/76 (26%), Positives = 38/76 (50%)
Frame = +2
Query: 263 KDLEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEEXSGTAQQKLLEAQQSADENNRMCK 442
K L+ KEK++ AL+ K+Q+ +++ K EE A+ K E+ + ++ K
Sbjct: 134 KALDVKEKKMENRRLVFDALSTKIQKAKKEESKLEEDLRNARAKYEESLEEFEDRMVQLK 193
Query: 443 VLENRAQQDEERMXQL 490
LE ++ R+ Q+
Sbjct: 194 ELEPDRVENVVRLLQM 209
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 31.9 bits (69), Expect = 0.091
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +2
Query: 239 QEQTGEANKDLEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEEXSGTAQQKLLEAQQS 415
+EQ E + +KE ++T+ E L+ ++QQ+ +LEK E + A L+ +S
Sbjct: 733 KEQVYEKESTISQKEVEITSLRNEKDRLSTRLQQVLLELEKQHETNEEAMDIDLKVPES 791
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 31.5 bits (68), Expect = 0.12
Identities = 22/101 (21%), Positives = 39/101 (38%)
Frame = +2
Query: 236 EQEQTGEANKDLEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEEXSGTAQQKLLEAQQS 415
+Q E +DL E LTA E + EE L +++E + E +Q
Sbjct: 843 QQNSKSEVERDLVETNNSLTAVENLLTTERAIALDKEEILRRTQERLANIEDSFSETKQQ 902
Query: 416 ADENNRMCKVLENRAQQDEERMXQLTNQLXEPVSSPXTLTE 538
+ R L+ + E + + T+++ +S L E
Sbjct: 903 NENLQRESASLKQINNELESELLEKTSKVETLLSEQNELKE 943
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 31.5 bits (68), Expect = 0.12
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +3
Query: 69 IKKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRE---LQKKLAQVEEDLILN 239
++K+++ KLE+ + K D + L+ K+N +V E L+K + + ED L
Sbjct: 833 LRKQIERTKLEETSFKKKIDDAVLANNEQKLKLTKLNFQVNELEQLEKDINKSSEDCDLQ 892
Query: 240 KNKL 251
K KL
Sbjct: 893 KKKL 896
Score = 30.7 bits (66), Expect = 0.21
Identities = 25/139 (17%), Positives = 58/139 (41%)
Frame = +2
Query: 269 LEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEEXSGTAQQKLLEAQQSADENNRMCKVL 448
L E++L T+ +++Q+E+D+ KS E ++KLLE L
Sbjct: 856 LANNEQKLKLTKLNFQV--NELEQLEKDINKSSEDCDLQKKKLLEVSSKQGSQAPFLNEL 913
Query: 449 ENRAQQDEERMXQLTNQLXEPVSSPXTLTENPDXGFAKTGLSLKTNSKSPKNRVXSGDAK 628
E+ ++ E + ++ + + + ++ + + T K K K
Sbjct: 914 ESEYEKLEADIQEMAQKSRTEILEANEYLHQLNEWNSELRIDVSTKFKCIKE-------K 966
Query: 629 ISELEEELKVVGNSLKSLE 685
S + EE++++ + ++S +
Sbjct: 967 KSNIGEEVRIIASKIESTD 985
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 30.7 bits (66), Expect = 0.21
Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 2/104 (1%)
Frame = +2
Query: 170 EGKRGSPRTPEEARPGGGRPDPEQEQTGEANKDLEEKEKQLTATEAEVAALNRKV--QQI 343
E + S R ++ E+E + + E+E + +E EV +
Sbjct: 22 ENRLTSSRLKKQDDSSSEEESSEEESASSSESESSEEESESEESEVEVPKKKAVAASEDS 81
Query: 344 EEDLEKSEEXSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEE 475
E D E SEE T ++ E ++ + E ++ +EE
Sbjct: 82 ESDSESSEEEEETESEEDSEVSDESESESESESESEEESESEEE 125
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.7 bits (66), Expect = 0.21
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 42 QQKAATMDAIKKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKK 206
Q+ + + ++ LEKD K + QQ ++NLR + + E+ E++K+
Sbjct: 225 QEASLEKSQLSSQLSDAVLEKDALQRKVSSLSQQFTESNLRYQNIVAELSEMRKQ 279
Score = 29.1 bits (62), Expect = 0.64
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +3
Query: 60 MDAIKKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQ 215
++ +KK +A++ EK K ++ + +NEEV L+K++ Q
Sbjct: 1354 LEELKKNCEALEKEKQELETKLQETAKETDTFKQQVNSLNEEVENLKKEVEQ 1405
Score = 27.9 bits (59), Expect = 1.5
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 8/76 (10%)
Frame = +2
Query: 224 RPDPEQEQTGEANKDLEEKEKQ-----LTATEAEVAALNRKVQQIEEDLE---KSEEXSG 379
R DP Q + + N + EKEKQ L T E ++V + E++E K E +
Sbjct: 1348 RVDPTQLEELKKNCEALEKEKQELETKLQETAKETDTFKQQVNSLNEEVENLKKEVEQAN 1407
Query: 380 TAQQKLLEAQQSADEN 427
T +L A EN
Sbjct: 1408 TKNTRLAAAWNEKCEN 1423
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 30.7 bits (66), Expect = 0.21
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Frame = +2
Query: 194 TPEEARPGGGRPDPEQEQTGEANKDLEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEE- 370
+P + G E E N D +E E + E E A N + ++ EED E+ EE
Sbjct: 68 SPNDTTINKGEDGNENEVDNVNNNDKKEDEDNVEENEEEADA-NEEEEEDEEDDEEDEED 126
Query: 371 --XSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERM 481
SG ++K + D N+ + E +DEE +
Sbjct: 127 EDESGGGRRK----RARHDRRNQFLDI-EAEVDEDEEEL 160
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 30.3 bits (65), Expect = 0.28
Identities = 12/50 (24%), Positives = 28/50 (56%)
Frame = +2
Query: 233 PEQEQTGEANKDLEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEEXSGT 382
PE+E+T E + ++K ++ + E +K ++++E ++EE + T
Sbjct: 219 PEEEETEEVKNEEDDKAPKIEEVDDESEKKEKKTKKVKETTTETEELNKT 268
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 29.9 bits (64), Expect = 0.37
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Frame = +2
Query: 320 LNRKVQQIEEDLEKSEEXSGTAQQKLLEAQQSADENNRMCKVLENR---AQQDEERMXQL 490
L Q +DL E + ++L+ +SA+E + +VLE R Q+DE +
Sbjct: 259 LKATFNQQNQDLYNQTEALKSTNEELINQIKSAEELDSAIQVLEERYRTMQRDEVKFQSA 318
Query: 491 TNQLXEPVSSPXTLTENPDXGFAKTGLS---LKTNSKSPKNRVXSGDAKISELEE 646
+ + + S L + + LK S K +V + D ISE E+
Sbjct: 319 MSGMKSKMESRTNLMKQLQVNIEEKESQLQLLKEKRDSLKYQVENQDISISEFEK 373
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 29.1 bits (62), Expect = 0.64
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Frame = +2
Query: 236 EQEQTGEANKDLEEKEKQLTATEAEVAALNRKVQQIEEDL----------EKSEEXSGTA 385
E + G KD E + + +E E L+ +V I EDL E +EE
Sbjct: 3957 ESDMNG-VTKDSVVSENENSDSEEENQDLDEEVNDIPEDLSNSLNEKLWDEPNEEDLLET 4015
Query: 386 QQKLLEAQQSADENNRMCKVLENRAQQDEER 478
+QK E + +E++ + K +N+A +D++R
Sbjct: 4016 EQKSNEQSAANNESDLVSKEDDNKALEDKDR 4046
>SPAC4F10.09c |||ribosome biogenesis protein Noc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 28.7 bits (61), Expect = 0.85
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Frame = +2
Query: 254 EANKDLEEKEKQLTATEAEV-AALNRKVQQIEEDLEKSEEXSGTAQQKLLE----AQQSA 418
+A K +++++ E EV AL Q+E D E+S+ S + + + ++QSA
Sbjct: 707 QARKTKVDRDEEGEIDEDEVWKALVDSKPQLEMDEEESDFDSEEMDKAMTDMGSDSEQSA 766
Query: 419 DENNRMCKVLENRAQ-QDEERMXQLTNQLXE 508
DEN+ E + DEE + ++ + E
Sbjct: 767 DENDNESMASEEKPMFSDEENLSEIAHSEDE 797
>SPAC23G3.10c |ssr3||SWI/SNF and RSC complex subunit
Ssr3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 425
Score = 27.5 bits (58), Expect = 2.0
Identities = 9/29 (31%), Positives = 21/29 (72%)
Frame = +2
Query: 575 LKTNSKSPKNRVXSGDAKISELEEELKVV 661
+ NS+ P+N V SG+ + +EL++ ++++
Sbjct: 1 MSNNSRLPENGVQSGNGEDAELKKSMRII 29
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 27.5 bits (58), Expect = 2.0
Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 4/124 (3%)
Frame = +2
Query: 182 GSPRTPEEARPGGGRPDPEQEQTGEANKDLEEKEKQLTATEAEVAALN----RKVQQIEE 349
GS +E + R E+ + EA + EKE+Q E ++ +K++++E+
Sbjct: 70 GSAEAGKEKKLQKQRAQEERIRQKEAERLKREKERQQREQEKKLREQEKIAAKKMKELEK 129
Query: 350 DLEKSEEXSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMXQLTNQLXEPVSSPXT 529
LEK Q++ E Q E ++ + + E + +L N + V
Sbjct: 130 -LEKERIRLQEQQRRKEERDQKLREKEEAQRLRQEQILNKERQQLKLNNFFTKGVEKRIA 188
Query: 530 LTEN 541
EN
Sbjct: 189 PNEN 192
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 27.5 bits (58), Expect = 2.0
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +2
Query: 245 QTGEANKDLEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEEXSGTAQQKLLEAQQSAD 421
Q E N+ ++ EK L TEA RK Q E LEK E +Q++ Q+ D
Sbjct: 48 QLSEINEAQKKAEKSLEQTEA------RK-QNFTELLEKEHEEQAITEQEIFSFQEKLD 99
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +2
Query: 320 LNRKVQQIEEDLEKSEEXSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEER 478
L + +Q + LEK E Q+KL Q +E+ + + ENR ++++E+
Sbjct: 98 LRERERQFYDSLEKKENERDRLQEKLRALQ---EESANLRRQRENRLREEQEQ 147
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 72 KKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKV-NEEVRELQKKLAQ 215
K+K+Q +K E+ + + E++ DA R EK+ NE V+++ +++
Sbjct: 201 KRKLQWVKEERTMLANHLEALERKLIDARNRKEKILNEIVKQVDPSISR 249
>SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 27.1 bits (57), Expect = 2.6
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +2
Query: 257 ANKDLEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEEXSGTAQQKLL--EAQQSAD 421
A KD E EK+L +T E + V+ ++ED+ T ++++ EA + D
Sbjct: 558 ALKDREPSEKELPSTAKETSFAPNAVKTLDEDITPQSSNWQTVAKQIIFPEAYKKKD 614
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = +3
Query: 84 QAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKL 251
Q LEK+N + + E + +L +++ + ++ LAQ E L+ N L
Sbjct: 900 QGTSLEKENEEEGKNPVESNCSEESLDDHNIDQTLVNKKETLAQDSESLLQKNNAL 955
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/74 (17%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +3
Query: 42 QQKAATMDAIKKKMQAMKLEKDNAMDKADTCEQQARDAN---LRAEKVNEEVRELQKKLA 212
+Q A + + K + +K ++ ++ EQ+ +AN L+ E++ ++ + +++
Sbjct: 54 KQSATDSELLHKNLDEIKFLQNEKLNNEKLLEQEQNEANDYRLKVERLEHKISDYVQEIN 113
Query: 213 QVEEDLILNKNKLE 254
+ L + K+ E
Sbjct: 114 SLNSQLQIQKSNPE 127
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 26.6 bits (56), Expect = 3.4
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +2
Query: 236 EQEQTGEANKDLEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEEXSGTAQQKLLEAQQS 415
E+ +TGE N L+EKE +++A+ A + L + +E +L +Q +LL+ +
Sbjct: 413 ERSKTGEMNNVLDEKE-EISASSA-LEKLIKNNSCLEAELPSMYAAFDQSQSRLLKKYEE 470
Query: 416 ADENNRMCKVLE 451
+ + K LE
Sbjct: 471 LETKEK--KALE 480
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 26.2 bits (55), Expect = 4.5
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +2
Query: 233 PEQEQTGEANKDLEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEEXSGTAQQKLLEAQQ 412
P ++ G N DLEE+ ++ + L+ KV+++E + + Q + EA+Q
Sbjct: 52 PSEQFVG--NNDLEEQRSGSIDSKDKEKPLDEKVKELENANKTLSDLVRRIQIQRDEAEQ 109
Query: 413 SADENNR 433
A+ NR
Sbjct: 110 KAEIYNR 116
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 248 TGEANKDLEEKEKQLTATEAEVAALNRKVQQIEEDL 355
T + +++ + KEK LTA EA V L R + E+ L
Sbjct: 124 TVQEDEESDPKEKILTAHEASVRHLRRLTESAEDFL 159
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.2 bits (55), Expect = 4.5
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Frame = +2
Query: 239 QEQTGEANKDLE-EKEKQ-LTATEAEVAALNRKVQQ----IEEDLEKSEEXSGTAQQKLL 400
Q+Q +A + ++ E EK+ L+ + ++ N K+ +++ LEKS + + L+
Sbjct: 798 QQQLSDAARKVKFESEKESLSLSLQKLKESNEKMSNDLHSLQKSLEKSGIEYSSRIKTLM 857
Query: 401 EAQQSADENNRMCKVLENRAQQDEERMXQL 490
+QS E+NR K+L+N+ Q E ++ +L
Sbjct: 858 LEKQSLSEDNR--KLLDNQ-QMMEIKLQEL 884
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 26.2 bits (55), Expect = 4.5
Identities = 37/154 (24%), Positives = 57/154 (37%), Gaps = 8/154 (5%)
Frame = +2
Query: 236 EQEQTGEANKDLEEKEKQLTATEAEVAALNRKVQQIEED--LEKSEEXSGTAQQKLLEAQ 409
E + T EA DL KE+ + + + K E+ EK E QQKL + +
Sbjct: 614 EIDNTKEA-LDLSVKERSIQEEKLNESLKTSKTNLEEQTQLAEKYHEELLDNQQKLYDLR 672
Query: 410 QSADENNRMCKVLENRAQQDEERMXQLTNQLXEPVSSPXTLTENPDXGFA------KTGL 571
D CK +E Q E E S ++ F + L
Sbjct: 673 IELDYTKSNCKQMEEEMQVLREGHESEIKDFIEEHSKLTKQLDDIKNQFGIISSKNRDLL 732
Query: 572 SLKTNSKSPKNRVXSGDAKISELEEELKVVGNSL 673
S SKS N + + ++K +LE +L ++ L
Sbjct: 733 SELEKSKSLNNSLAALESKNKKLENDLNLLTEKL 766
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 26.2 bits (55), Expect = 4.5
Identities = 26/143 (18%), Positives = 61/143 (42%), Gaps = 6/143 (4%)
Frame = +2
Query: 200 EEARPGGGRPDPEQEQTGEANKDLEEKEKQLT-----ATEAEVAALNRKVQQIEEDLEKS 364
E++ G + ++ +KD+EEK+ ++T TE +V A ++ IE + +
Sbjct: 416 EKSDVGEEKESKDENNKASLHKDVEEKDTKITNEDTGKTETDVKA--KETDSIEANDKDE 473
Query: 365 EEXSGTAQQKLLEAQ-QSADENNRMCKVLENRAQQDEERMXQLTNQLXEPVSSPXTLTEN 541
+ S + K+ E + + AD + +E ++++ + +++ + S
Sbjct: 474 KTDSKETEDKVEETESKEADVKAKETDSIEVDDKEEKTDSKETADKVEQTDSKDTNEKPA 533
Query: 542 PDXGFAKTGLSLKTNSKSPKNRV 610
D + K +SK K ++
Sbjct: 534 KDDNKEANEKAEKVDSKDVKEKI 556
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 464 AVPCSPTLCTYGCSRQPTAGPRAASV 387
AVP SPTL + QPT P +A+V
Sbjct: 263 AVPLSPTLAVWLPMTQPTFQPPSANV 288
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/92 (16%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Frame = +2
Query: 239 QEQTGEANKDLEEKEKQLTATEAEVAALN----RKVQQIEEDLEKSEEXSGTAQQKLLEA 406
+EQ+ K++EE + AT+ ++ L +++ +++ +EK+++ +++ +
Sbjct: 111 EEQSTSYQKEIEEVRNEKEATQVKIHELLDAKWKEIAELKTQIEKNDQALSEKNHEVMVS 170
Query: 407 QQSADENNRMCKVLENRAQQDEERMXQLTNQL 502
Q+ + LE E++ +L
Sbjct: 171 NQALQMKDTNLTNLEKLFADSREQLETKCKEL 202
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.8 bits (54), Expect = 6.0
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +3
Query: 45 QKAATMDAIKKKMQAMKLE-KDNAMDKADTCEQQARDANLRAEKVNEE--VRELQKKLAQ 215
Q+ A +A +K + +LE ++NA +A+ EQ R+A +A++ EE RE ++K +
Sbjct: 538 QEKAEAEAKRKAEEKARLEAEENAKREAE--EQAKREAEEKAKREAEEKAKREAEEKAKR 595
Query: 216 VEED 227
E+
Sbjct: 596 EAEE 599
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 25.8 bits (54), Expect = 6.0
Identities = 9/31 (29%), Positives = 21/31 (67%)
Frame = +2
Query: 428 NRMCKVLENRAQQDEERMXQLTNQLXEPVSS 520
N+ ++LEN ++++E R ++ Q EP+++
Sbjct: 2201 NQKKEILENESKEEETRQPEVNIQPEEPINT 2231
>SPBC1709.02c |vas2|SPBC1734.18c|valine-tRNA ligase Vas2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 980
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +2
Query: 191 RTPEEARPGGGRPDPEQEQTGEANKDLEEKEKQLTATEAEVAALNRKVQQIEEDLEK 361
++ + + PG G P P+ E+ E + +K +L A++AA K + + L+K
Sbjct: 10 QSKDSSAPGSGEPRPKTEKELERER---QKAAKLEKYHAKLAAKKAKEEARKPKLDK 63
>SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity protein
kinase Mph1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 25.8 bits (54), Expect = 6.0
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 182 GSPRTPEEARPGGGRPDPEQEQTGEANKDLEEKEKQLTATEAEVAALNRKVQQIEE-DLE 358
G P+ E + + T EA++D+E K ++++ VAA K Q+ L+
Sbjct: 167 GPPKRAEYTLTDPSKTSDTKNST-EADEDIEMKSREVSPASNSVAATTLKPLQLHNTPLQ 225
Query: 359 KSEE 370
S+E
Sbjct: 226 TSQE 229
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +2
Query: 254 EANKDLEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEEXSGTAQQKLLEAQQSADE 424
E + EE+ K++ A + + LN+K +++ + K +E QK+ E +S ++
Sbjct: 362 ERQRQHEERLKRINANKKALEELNQKKRELAQQQLKEQE---LLMQKIKETDRSGNK 415
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +2
Query: 182 GSPRTPEEARPGGGRPDPE-QEQTGEANKDLEE 277
G RTPEE R G P P+ Q + N E+
Sbjct: 93 GEKRTPEEPRKLPGVPAPQKQSEASSVNSSTEK 125
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 696 SLGYSRDLRELPTTFNSSSSSEILASP 616
S G D R LP+ N SSE L +P
Sbjct: 319 SFGLESDERSLPSVSNDLKSSETLKNP 345
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 25.4 bits (53), Expect = 7.9
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +3
Query: 126 DTCEQQARDANLRAEKVNEEV 188
D C++ +DANL+ ++NE +
Sbjct: 361 DPCKRALKDANLQTSEINEVI 381
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 242 EQTGEANKDLEEKEKQLTATEAEVAALNRKVQQIEED-LEKSEE 370
EQ K++EE E +++ + V L ++ I+ED + K EE
Sbjct: 857 EQYDARKKEIEELESKMSDFDQSVEELQDEMNSIKEDWVSKLEE 900
>SPBC29A3.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 398
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 284 KQLTATEAEVAALNRKVQQIEEDLEKSEEXSGTA 385
K T + E+ A + K QQ+ +DL+++E+ T+
Sbjct: 38 KDPTTSMKELVACSEKTQQVFDDLKRTEKKFHTS 71
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,210,959
Number of Sequences: 5004
Number of extensions: 39259
Number of successful extensions: 283
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 282
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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