Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0689
         (720 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060936-1|AAL28484.1|  585|Drosophila melanogaster GM07803p pro...    29   6.4  
AE014134-1643|AAS64663.1| 1494|Drosophila melanogaster CG33298-P...    29   6.4  
AE014134-1642|AAS64662.1| 1517|Drosophila melanogaster CG33298-P...    29   6.4  

>AY060936-1|AAL28484.1|  585|Drosophila melanogaster GM07803p
           protein.
          Length = 585

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = -2

Query: 698 HCSISF--WRIIHV*NFCDTIVAITISTVFLVLAAKQYPCISISLFGLTITSFV*YVFLX 525
           HC+I    W ++HV       ++I +S     L A  Y  + ++ FG+  + +V +V   
Sbjct: 452 HCAIEIRSWTVLHV-------LSIVLSLGSFYLFAIVYDSVCMNCFGVRSSYWVIFVCFA 504

Query: 524 LTIPTLVIPISTI 486
             +  LVI +ST+
Sbjct: 505 SAVHWLVIMLSTV 517


>AE014134-1643|AAS64663.1| 1494|Drosophila melanogaster CG33298-PA,
            isoform A protein.
          Length = 1494

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = -2

Query: 698  HCSISF--WRIIHV*NFCDTIVAITISTVFLVLAAKQYPCISISLFGLTITSFV*YVFLX 525
            HC+I    W ++HV       ++I +S     L A  Y  + ++ FG+  + +V +V   
Sbjct: 1384 HCAIEIRSWTVLHV-------LSIVLSLGSFYLFAIVYDSVCMNCFGVRSSYWVIFVCFA 1436

Query: 524  LTIPTLVIPISTI 486
              +  LVI +ST+
Sbjct: 1437 SAVHWLVIMLSTV 1449


>AE014134-1642|AAS64662.1| 1517|Drosophila melanogaster CG33298-PB,
            isoform B protein.
          Length = 1517

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = -2

Query: 698  HCSISF--WRIIHV*NFCDTIVAITISTVFLVLAAKQYPCISISLFGLTITSFV*YVFLX 525
            HC+I    W ++HV       ++I +S     L A  Y  + ++ FG+  + +V +V   
Sbjct: 1384 HCAIEIRSWTVLHV-------LSIVLSLGSFYLFAIVYDSVCMNCFGVRSSYWVIFVCFA 1436

Query: 524  LTIPTLVIPISTI 486
              +  LVI +ST+
Sbjct: 1437 SAVHWLVIMLSTV 1449


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,762,067
Number of Sequences: 53049
Number of extensions: 470629
Number of successful extensions: 1103
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)