Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0688
(666 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 108 4e-24
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 107 6e-24
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 107 6e-24
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 107 8e-24
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 107 8e-24
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 104 6e-23
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 104 6e-23
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 103 1e-22
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 92 3e-19
12_02_1282 + 27528159-27529148,27529549-27529614 91 1e-18
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 57 1e-08
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 52 4e-07
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 49 4e-06
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 45 5e-05
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 43 2e-04
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 43 2e-04
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 37 0.013
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 33 0.20
07_03_0463 - 18449908-18450171,18450718-18450810,18451170-184512... 30 1.4
07_01_0614 - 4545306-4545833 29 2.5
07_03_0752 - 21241883-21242233,21242336-21242486,21242586-212428... 29 3.3
07_03_0008 + 12303536-12303893,12303910-12304176,12304635-123049... 29 4.4
01_06_1741 + 39581656-39581680,39582627-39582697,39582779-395828... 28 5.8
03_02_0924 + 12429764-12430120,12430562-12430637,12430803-124308... 28 7.7
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 108 bits (259), Expect = 4e-24
Identities = 48/54 (88%), Positives = 50/54 (92%)
Frame = -3
Query: 520 PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
P KIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct: 321 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 374
Score = 90.6 bits (215), Expect = 1e-18
Identities = 40/56 (71%), Positives = 47/56 (83%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E TYNS MKCDVDIR+DLY N VLSGGT M+PGIADRM EIT LAPS+++++
Sbjct: 272 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIK 327
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 107 bits (258), Expect = 6e-24
Identities = 47/54 (87%), Positives = 50/54 (92%)
Frame = -3
Query: 520 PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
P KIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHRKCF
Sbjct: 324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHRKCF 377
Score = 90.6 bits (215), Expect = 1e-18
Identities = 40/56 (71%), Positives = 47/56 (83%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E TYNS MKCDVDIR+DLY N VLSGGT M+PGIADRM EIT LAPS+++++
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIK 330
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 107 bits (258), Expect = 6e-24
Identities = 47/54 (87%), Positives = 50/54 (92%)
Frame = -3
Query: 520 PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
P KIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHRKCF
Sbjct: 324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHRKCF 377
Score = 91.1 bits (216), Expect = 7e-19
Identities = 40/56 (71%), Positives = 47/56 (83%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E TYNS MKCDVDIR+DLY N VLSGGT M+PGIADRM EIT LAPS+++++
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMSKEITALAPSSMKIK 330
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 107 bits (257), Expect = 8e-24
Identities = 47/54 (87%), Positives = 50/54 (92%)
Frame = -3
Query: 520 PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
P KIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHRKCF
Sbjct: 327 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPAIVHRKCF 380
Score = 89.4 bits (212), Expect = 2e-18
Identities = 39/56 (69%), Positives = 47/56 (83%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E TYNS MKCDVDIR+DLY N VLSGG+ M+PGIADRM EIT LAPS+++++
Sbjct: 278 GIHETTYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADRMSKEITALAPSSMKIK 333
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 107 bits (257), Expect = 8e-24
Identities = 47/54 (87%), Positives = 50/54 (92%)
Frame = -3
Query: 520 PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
P KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
Score = 90.6 bits (215), Expect = 1e-18
Identities = 40/56 (71%), Positives = 47/56 (83%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E TYNS MKCDVDIR+DLY N VLSGGT M+PGIADRM EIT LAPS+++++
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIK 330
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 104 bits (250), Expect = 6e-23
Identities = 45/54 (83%), Positives = 50/54 (92%)
Frame = -3
Query: 520 PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
P KIK++APPERKYSVWIGGSILASLSTFQQMWIS+ EY+ESGP+IVHRKCF
Sbjct: 324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEESGPAIVHRKCF 377
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/56 (69%), Positives = 47/56 (83%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E TYNS MKCDVDIR+DLY N VLSGG+ M+PGIADRM EIT LAPS+++++
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIK 330
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 104 bits (250), Expect = 6e-23
Identities = 47/57 (82%), Positives = 49/57 (85%)
Frame = -3
Query: 529 SSRPIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
S P K+K+IAPPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVH KCF
Sbjct: 320 SLAPSSMKVKVIAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPGIVHMKCF 376
Score = 88.2 bits (209), Expect = 5e-18
Identities = 39/56 (69%), Positives = 47/56 (83%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E TYNS MKCDVDIR+DLY N VLSGG+ M+PGIADRM EIT LAPS+++++
Sbjct: 274 GIHEATYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADRMSKEITSLAPSSMKVK 329
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 103 bits (248), Expect = 1e-22
Identities = 46/54 (85%), Positives = 48/54 (88%)
Frame = -3
Query: 520 PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
P KIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVH KCF
Sbjct: 323 PGSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPGIVHMKCF 376
Score = 86.2 bits (204), Expect = 2e-17
Identities = 37/56 (66%), Positives = 45/56 (80%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E TYNS MKCDVDIR+DLY N VLSGG+ M+PGI DRM EIT LAP +++++
Sbjct: 274 GIHEATYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIGDRMSKEITALAPGSMKIK 329
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 92.3 bits (219), Expect = 3e-19
Identities = 47/68 (69%), Positives = 50/68 (73%), Gaps = 14/68 (20%)
Frame = -3
Query: 520 PIDNKIKIIAPPERKYSVWIGGSILASLSTFQ--------------QMWISKQEYDESGP 383
P KIK++APPERKYSVWIGGSILASLSTFQ QMWISK EYDESGP
Sbjct: 324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVNLTPTLYEVARMQMWISKGEYDESGP 383
Query: 382 SIVHRKCF 359
+IVHRKCF
Sbjct: 384 AIVHRKCF 391
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/56 (69%), Positives = 47/56 (83%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E TYNS MKCDVDIR+DLY N VLSGG+ M+PGIADRM EIT LAPS+++++
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIK 330
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 90.6 bits (215), Expect = 1e-18
Identities = 40/56 (71%), Positives = 47/56 (83%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E TYNS MKCDVDIR+DLY N VLSGGT M+PGIADRM EIT LAPS+++++
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIK 330
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = -3
Query: 448 LASLSTFQQMWISKQEYDESGPSIVHRKCF 359
LA S +MWI+K EYDESGPSIVHRKCF
Sbjct: 322 LAPSSMKIKMWIAKAEYDESGPSIVHRKCF 351
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Frame = -3
Query: 499 IIAPPE------RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
++ PPE +YS W+GG+ILA + Q ++K +YDE+GPSIVH+KCF
Sbjct: 346 LVKPPEYMPENLARYSAWLGGAILAKVVFPQNQHVTKGDYDETGPSIVHKKCF 398
Score = 31.1 bits (67), Expect = 0.82
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLA 520
GI S + R L NT+L GGT G DR Q E + A
Sbjct: 291 GIVHQLVTSVSNVTPEYHRQLLENTMLCGGTASMTGFEDRFQREANLSA 339
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 52.0 bits (119), Expect = 4e-07
Identities = 23/41 (56%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Frame = -3
Query: 514 DNKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQE 401
+ ++K++A ER++SVWIGGSILASL +FQQMW SK +
Sbjct: 429 NTRVKVLASGNSVERRFSVWIGGSILASLGSFQQMWFSKAD 469
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLRSL 493
G+ +S +CDVDIR++L ++ +LSGG+ + +R++ E+ + R++ L
Sbjct: 378 GLPRMVIDSVNRCDVDIRKELLSSILLSGGSSSILQLKERLEKEVLEESSGNTRVKVL 435
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/54 (38%), Positives = 37/54 (68%)
Frame = -3
Query: 538 GNHSSRPIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 377
G+ ++PI+ + +++ P ++Y+VW GGS+LAS + F + +K EY+E G SI
Sbjct: 411 GDAKAQPIE--VNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASI 462
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -1
Query: 624 VDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTI 508
+D RR LY N VLSGG+ M+ R+Q ++ + + +
Sbjct: 364 IDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARV 402
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = -3
Query: 520 PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
P D ++KIIA + W GGS+LA F+ M I+K EY+E G R+ F
Sbjct: 375 PDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRRRFF 428
Score = 33.5 bits (73), Expect = 0.15
Identities = 12/56 (21%), Positives = 29/56 (51%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
G+ E + C ++ L+ +L+GG+ ++P +R++ E+ L P +++
Sbjct: 326 GLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTERLEKELRPLVPDDYQVK 381
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEI 532
G+ + + + D+D R LY + VLSGG+ MYPG+ R++ E+
Sbjct: 303 GMADMAFRCIQEMDIDNRMTLYQHIVLSGGSTMYPGLPSRLEKEM 347
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = -3
Query: 508 KIKIIAPPERKYSVWIGGSILASL 437
+++I PP RK+ V++GG++LA +
Sbjct: 367 RLRIEDPPRRKHMVYLGGAVLAGI 390
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = -3
Query: 508 KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 377
++ ++A P + Y+ W GGS+ AS F + +K+EY+E G SI
Sbjct: 386 EVNVVAHPIQSYAAWFGGSVAASNPEFYESCHTKEEYEEHGASI 429
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = -1
Query: 624 VDIRRDLYANTVLSGGTPMYPGIADRMQXEI 532
+D RRDLY N VLSGG+ M+ R+Q +I
Sbjct: 333 IDTRRDLYKNIVLSGGSTMFKDFHKRLQNDI 363
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Frame = -3
Query: 517 IDNKIKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKQEYDE----SGPSIVH 371
I I++I PP S W G +++++STF + W I K+++ + +GPS V+
Sbjct: 429 ISEGIRVIPPPFGTDSAWFGAKMISNVSTFTEAWCIKKKQFRQKTRRNGPSFVN 482
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -1
Query: 603 YANTVLSGGTPMYPGIADRMQXEITVLAPSTI 508
Y VLSGG+ PG+++R++ E+ L P+ I
Sbjct: 398 YKTVVLSGGSSCLPGLSERLEKELRELLPAHI 429
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = -3
Query: 538 GNHSSRPIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 365
G RP + +K++ + W G + A+ S F + S +Y E G ++ HRK
Sbjct: 645 GIRQFRPYLSPLKLVRAADPLIDAWRGAAAFAASSKFGRHTFSLADYREHGENLFHRK 702
>07_03_0463 -
18449908-18450171,18450718-18450810,18451170-18451254,
18451607-18451705,18452099-18452238,18453036-18453482
Length = 375
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 248 YYVITIISYVQLN*RRLQA*IEQPAAGCWR 337
Y+ +T + +V L RLQ +E PAA CWR
Sbjct: 242 YFSLTFVPFVVL---RLQKFLESPAATCWR 268
>07_01_0614 - 4545306-4545833
Length = 175
Score = 29.5 bits (63), Expect = 2.5
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = -3
Query: 580 WYPHVPWNRRPYAXGNHSSRPIDNKIKIIAPP 485
W+P++PW+R+P++ P + + PP
Sbjct: 114 WFPNIPWDRQPFSALRDLCDPFLALCREVMPP 145
>07_03_0752 -
21241883-21242233,21242336-21242486,21242586-21242823,
21242917-21243127,21243214-21243344,21245046-21245931,
21246087-21246140,21246397-21246461,21246842-21246892,
21246960-21247029,21247493-21247597
Length = 770
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 324 RAAGGSDARCV*KHFLCTMEGPDS 395
RAAGG ARC+ LC E P S
Sbjct: 675 RAAGGEIARCIHVGLLCVQENPAS 698
>07_03_0008 +
12303536-12303893,12303910-12304176,12304635-12304951,
12304975-12305819,12305859-12306069
Length = 665
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +3
Query: 324 RAAGGSDARCV*KHFLCTM----EGPDSSYSCFEIHICWK 431
RA G CV + FLCT+ +G + C E H+ WK
Sbjct: 301 RALGWDKFACVDEPFLCTLLKVGDGVNFRLFCKEYHLSWK 340
>01_06_1741 +
39581656-39581680,39582627-39582697,39582779-39582898,
39583034-39583094,39583186-39583242,39583413-39583600,
39583747-39583818,39583953-39584180
Length = 273
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = -1
Query: 477 STPYGSVDRSSPPSLPSNRCGSRNRSTTSLAPPLYTGSASKRTARRCLQQPAAGCSIQAC 298
+TPY + P +N ++ +A P A KRTA + + +AG + + C
Sbjct: 214 ATPYPAKQAKKTPV--NNDMAKQSSGYVHVATPYPAKQAKKRTANNDMSEHSAGYACKPC 271
Query: 297 N 295
N
Sbjct: 272 N 272
>03_02_0924 +
12429764-12430120,12430562-12430637,12430803-12430849,
12431850-12431962,12432056-12432129,12432258-12432353,
12432440-12432559,12432660-12432893,12433486-12433634,
12434145-12434301,12434387-12434542,12435359-12435735,
12435871-12436020,12437071-12437253,12437440-12437643,
12437869-12437975,12438253-12438406,12438796-12438917,
12439541-12439787
Length = 1040
Score = 27.9 bits (59), Expect = 7.7
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Frame = +2
Query: 380 GGARLVVLLFRDPHLLEGREGGEDRSTDPYGVLPLWRSNDLNLIVDGARTVISXCIRSAI 559
GG L +L L +GG P +P WRS L+ + + R V S C+ +
Sbjct: 293 GGEPLDILESWTMELFSKVKGGPLLDMSPKTDMPFWRSGKLHRL-EAVRDVHSLCLSWTL 351
Query: 560 P----GYMGVPPD 586
P YM P D
Sbjct: 352 PCLHKEYMKKPED 364
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,066,788
Number of Sequences: 37544
Number of extensions: 334178
Number of successful extensions: 1020
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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