Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0688
(666 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 5e-25
SB_56| Best HMM Match : Actin (HMM E-Value=0) 111 5e-25
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 7e-25
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 111 7e-25
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 1e-24
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 2e-24
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 100 1e-21
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 48 9e-06
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 38 0.006
SB_54| Best HMM Match : Actin (HMM E-Value=0) 37 0.013
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 36 0.039
SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) 31 0.64
SB_8479| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_30449| Best HMM Match : DUF566 (HMM E-Value=1.2) 29 3.4
SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_41135| Best HMM Match : Ribonuc_red_lgN (HMM E-Value=0.78) 29 3.4
SB_12780| Best HMM Match : SAC3_GANP (HMM E-Value=3.7e-07) 28 5.9
SB_21157| Best HMM Match : Laminin_EGF (HMM E-Value=0.036) 28 7.9
SB_56605| Best HMM Match : WD40 (HMM E-Value=2.5e-12) 28 7.9
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 7.9
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 111 bits (267), Expect = 5e-25
Identities = 52/57 (91%), Positives = 52/57 (91%)
Frame = -3
Query: 529 SSRPIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
S P KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 320 SLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 95.5 bits (227), Expect = 3e-20
Identities = 43/56 (76%), Positives = 49/56 (87%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E TYNS MKCDVDIR+DLYANTVLSGG+ MYPGIADRMQ EIT LAP T++++
Sbjct: 274 GIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIK 329
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 111 bits (267), Expect = 5e-25
Identities = 52/57 (91%), Positives = 52/57 (91%)
Frame = -3
Query: 529 SSRPIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
S P KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 319 SLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
Score = 95.5 bits (227), Expect = 3e-20
Identities = 43/56 (76%), Positives = 49/56 (87%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E TYNS MKCDVDIR+DLYANTVLSGG+ MYPGIADRMQ EIT LAP T++++
Sbjct: 273 GIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIK 328
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 111 bits (266), Expect = 7e-25
Identities = 51/54 (94%), Positives = 51/54 (94%)
Frame = -3
Query: 520 PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
P KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 322 PPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/56 (73%), Positives = 49/56 (87%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E TYNS MKCDVDIR+DLYANTVLSGG+ M+PGIADRMQ EI+ LAP T++++
Sbjct: 273 GIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIK 328
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 111 bits (266), Expect = 7e-25
Identities = 51/54 (94%), Positives = 51/54 (94%)
Frame = -3
Query: 520 PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
P KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 94.7 bits (225), Expect = 6e-20
Identities = 42/56 (75%), Positives = 49/56 (87%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E TYNS MKCDVDIR+DLYANTVLSGG+ MYPGIADRMQ EI+ LAP T++++
Sbjct: 274 GIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIK 329
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 110 bits (264), Expect = 1e-24
Identities = 50/54 (92%), Positives = 51/54 (94%)
Frame = -3
Query: 520 PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
P KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 296 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 349
Score = 96.7 bits (230), Expect = 1e-20
Identities = 42/56 (75%), Positives = 50/56 (89%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E TYNS MKCDVDIR+DLYANTV+SGGT MYPG+ADRMQ EI+ LAPST++++
Sbjct: 247 GIHETTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGLADRMQKEISALAPSTMKIK 302
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 109 bits (263), Expect = 2e-24
Identities = 50/54 (92%), Positives = 51/54 (94%)
Frame = -3
Query: 520 PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
P KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 285 PPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 338
Score = 96.3 bits (229), Expect = 2e-20
Identities = 43/56 (76%), Positives = 49/56 (87%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E TYNS MKCDVDIR+DLYANTVLSGGT MYPGIADRMQ EI+ LAP T++++
Sbjct: 236 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIK 291
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 100 bits (239), Expect = 1e-21
Identities = 43/50 (86%), Positives = 47/50 (94%)
Frame = -3
Query: 508 KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
K+K+IAPPERKYSVWIGGSILASLSTFQQMWI+K+EY E GP IVHRKCF
Sbjct: 100 KVKVIAPPERKYSVWIGGSILASLSTFQQMWIAKEEYHEYGPPIVHRKCF 149
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/56 (62%), Positives = 46/56 (82%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E YN MKCDVDIR+DLY+N VLSGG+ M+PGIADRMQ EI +LA ++++++
Sbjct: 47 GIHEAIYNCIMKCDVDIRKDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVK 102
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVL 523
G+ E +N+ D+D R + Y + VLSGG+ MYPG+ R++ EI L
Sbjct: 277 GVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREIKQL 324
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = -3
Query: 508 KIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKQEYDESG 386
KI+I PP RK+ V++GG++LA + W++++EY+E G
Sbjct: 358 KIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 47.6 bits (108), Expect = 9e-06
Identities = 25/64 (39%), Positives = 37/64 (57%)
Frame = -3
Query: 538 GNHSSRPIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
G +PI+ ++ I+ ++Y+VW GGS+LAS F + +K +YDE GPSI F
Sbjct: 283 GRIKPKPIETQV--ISHHMQRYAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF 340
Query: 358 *THR 347
HR
Sbjct: 341 -LHR 343
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = -1
Query: 663 IXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLRSLL 490
+ E N C +D+RR LY N VLSGG+ M+ R+Q +I + +++ L
Sbjct: 223 LSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDIKRTVDARLKMSETL 280
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = -1
Query: 645 NSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPS 514
+S + C +D R+ L N VL GGT M PG R+ EI +L S
Sbjct: 64 DSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQS 107
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
G+ + S D+DIR L+ + +++GG + G +R+ E+ P ++RL+
Sbjct: 151 GVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRLK 206
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Frame = -3
Query: 529 SSRPIDNKIKIIA---PPERKYSVWIGGSILASL 437
S P ++K+I+ E++++ WIGGSILASL
Sbjct: 197 SKTPPSMRLKLISNNSSVEKRFNPWIGGSILASL 230
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 37.1 bits (82), Expect = 0.013
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSG 580
GI E + S KCD+D+R +L+ N VLSG
Sbjct: 2318 GIHESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = -1
Query: 663 IXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPG 559
I E + K D+D+RR LY+N VLSGG+ ++ G
Sbjct: 257 IIEVLAFAIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0)
Length = 1066
Score = 31.5 bits (68), Expect = 0.64
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -1
Query: 534 ITVLAPSTIRLRSLLLQRGSTPYGSVDRSSPPSLPSNRCGSRNRSTTSLAPPLYTGSASK 355
+T + +RL+SL R + PY P N+ G++ R +L P++TGS +
Sbjct: 851 LTRFLDTKLRLQSLNPARAAIPYPYWQ------YPGNQAGNKTRPLRALRSPIHTGSTLE 904
Query: 354 --RTARRCLQQPAAGC 313
RT + P+A C
Sbjct: 905 VDRTRQGTRPDPSARC 920
>SB_8479| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = -1
Query: 531 TVLAPSTIRLRSLLLQRGS-TPYGSVDRSSPPSLPSNRCGSRNRS----TTSLAPPLYTG 367
T S+I S LL G + GS+ SP S P +R GSR R+ T+S A +
Sbjct: 315 TPAGSSSISSISSLLSPGMISSVGSIAPPSPTSTPRSRTGSRTRTPPTPTSSRASSRGSA 374
Query: 366 SASKRTARRC 337
+T ++C
Sbjct: 375 RGGAKTTKKC 384
>SB_30449| Best HMM Match : DUF566 (HMM E-Value=1.2)
Length = 415
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Frame = -3
Query: 565 PWNRRPYAXGNHSSR-PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE---- 401
P RP +HS R PID PP+ Y ++GGSI SL+ + + Q+
Sbjct: 108 PLQSRPTRADSHSVRQPID-------PPQVTYQDYLGGSINRSLTCTPAVTTTSQDSRPP 160
Query: 400 -YDESGPSIVH 371
Y E+G + H
Sbjct: 161 SYPETGARVSH 171
>SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1894
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Frame = -3
Query: 565 PWNRRPYAXGNHSSR-PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE---- 401
P RP +HS R PID PP+ Y ++GGSI SL+ + + Q+
Sbjct: 727 PLQSRPTRADSHSVRQPID-------PPQVTYQDYLGGSINRSLTCTPAITTTSQDSRPP 779
Query: 400 -YDESGPSIVH 371
Y E+G + H
Sbjct: 780 SYPETGARVSH 790
>SB_41135| Best HMM Match : Ribonuc_red_lgN (HMM E-Value=0.78)
Length = 230
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = -3
Query: 535 NHSSRPIDNKIKIIAPPERKYSVWIGGS-ILASLSTFQQMW--ISKQEYDESG 386
N SS + K+K + P ++Y + IGGS + + Q W ++ +EY E+G
Sbjct: 154 NPSSDEMGEKLKNVRSPGKRYRLAIGGSPFIQNERPKWQCWEAMTDEEYQEAG 206
>SB_12780| Best HMM Match : SAC3_GANP (HMM E-Value=3.7e-07)
Length = 436
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = -1
Query: 519 PSTIRLRSLLLQRGSTPY----GSVDRSSPPSLPSNRCGSRNRSTTSLAP 382
P T+ + L G TP G+ S+P ++P + + N STTSL+P
Sbjct: 102 PGTLLSKPSLPYPGYTPSNQLAGTTRPSAPATIPHSTTNTDNSSTTSLSP 151
>SB_21157| Best HMM Match : Laminin_EGF (HMM E-Value=0.036)
Length = 897
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 549 GRRFQGTWGYHRTIXCWRTSPYGCPRRTSXW 641
G+ G G T R S Y CPRR S W
Sbjct: 29 GKNLPGVEGEFFTQSILRASGYECPRRQSAW 59
>SB_56605| Best HMM Match : WD40 (HMM E-Value=2.5e-12)
Length = 630
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 434 REGGEDRSTDPYGVLPLWRSNDLNLIVDGARTVISXCIRSAIPGYMGVPP 583
RE GED + + + + + NDL ++D V IR PG+ V P
Sbjct: 576 REWGEDLARE-FSTIRFYSMNDLLTLLDPRAFVSRKQIRICFPGFATVTP 624
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 450 IDPPIHTEYFLSGGAMILILLSMGREL*FPFAYGRRF 560
+DPP+ +Y L+GG ++ + L FPF + F
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCIFQGF 794
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,709,164
Number of Sequences: 59808
Number of extensions: 362113
Number of successful extensions: 1022
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1717720750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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