Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0688
(666 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 111 4e-25
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 111 4e-25
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 111 4e-25
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 111 4e-25
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 111 4e-25
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 111 4e-25
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 111 4e-25
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 111 4e-25
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 111 4e-25
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 111 4e-25
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 110 7e-25
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 78 5e-15
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 68 7e-12
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 51 8e-07
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 36 0.026
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 36 0.026
AF016673-3|AAB66122.2| 366|Caenorhabditis elegans Hypothetical ... 33 0.14
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 6.8
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 6.8
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 6.8
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 6.8
Z29116-3|CAA82372.1| 485|Caenorhabditis elegans Hypothetical pr... 27 9.1
U20902-1|AAA84393.1| 485|Caenorhabditis elegans cyclin A protein. 27 9.1
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 111 bits (267), Expect = 4e-25
Identities = 51/54 (94%), Positives = 51/54 (94%)
Frame = -3
Query: 520 PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
P KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 322 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
Score = 92.3 bits (219), Expect = 3e-19
Identities = 42/56 (75%), Positives = 48/56 (85%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E TY S MKCDVDIR+DLYANTVLSGGT M+PGIADRMQ EI LAPST++++
Sbjct: 273 GIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIK 328
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 111 bits (267), Expect = 4e-25
Identities = 51/54 (94%), Positives = 51/54 (94%)
Frame = -3
Query: 520 PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
P KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 97.9 bits (233), Expect = 6e-21
Identities = 43/56 (76%), Positives = 50/56 (89%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E +YNS MKCD+DIR+DLYANTVLSGGT MYPGIADRMQ EIT LAPST++++
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 329
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 111 bits (267), Expect = 4e-25
Identities = 51/54 (94%), Positives = 51/54 (94%)
Frame = -3
Query: 520 PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
P KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 97.9 bits (233), Expect = 6e-21
Identities = 43/56 (76%), Positives = 50/56 (89%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E +YNS MKCD+DIR+DLYANTVLSGGT MYPGIADRMQ EIT LAPST++++
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 329
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 111 bits (267), Expect = 4e-25
Identities = 51/54 (94%), Positives = 51/54 (94%)
Frame = -3
Query: 520 PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
P KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 97.9 bits (233), Expect = 6e-21
Identities = 43/56 (76%), Positives = 50/56 (89%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E +YNS MKCD+DIR+DLYANTVLSGGT MYPGIADRMQ EIT LAPST++++
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 329
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 111 bits (267), Expect = 4e-25
Identities = 51/54 (94%), Positives = 51/54 (94%)
Frame = -3
Query: 520 PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
P KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 97.9 bits (233), Expect = 6e-21
Identities = 43/56 (76%), Positives = 50/56 (89%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E +YNS MKCD+DIR+DLYANTVLSGGT MYPGIADRMQ EIT LAPST++++
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 329
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 111 bits (267), Expect = 4e-25
Identities = 51/54 (94%), Positives = 51/54 (94%)
Frame = -3
Query: 520 PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
P KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 97.9 bits (233), Expect = 6e-21
Identities = 43/56 (76%), Positives = 50/56 (89%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E +YNS MKCD+DIR+DLYANTVLSGGT MYPGIADRMQ EIT LAPST++++
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 329
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 111 bits (267), Expect = 4e-25
Identities = 51/54 (94%), Positives = 51/54 (94%)
Frame = -3
Query: 520 PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
P KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 97.9 bits (233), Expect = 6e-21
Identities = 43/56 (76%), Positives = 50/56 (89%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E +YNS MKCD+DIR+DLYANTVLSGGT MYPGIADRMQ EIT LAPST++++
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 329
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 111 bits (267), Expect = 4e-25
Identities = 51/54 (94%), Positives = 51/54 (94%)
Frame = -3
Query: 520 PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
P KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 279 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
Score = 97.9 bits (233), Expect = 6e-21
Identities = 43/56 (76%), Positives = 50/56 (89%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E +YNS MKCD+DIR+DLYANTVLSGGT MYPGIADRMQ EIT LAPST++++
Sbjct: 230 GIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 285
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 111 bits (267), Expect = 4e-25
Identities = 51/54 (94%), Positives = 51/54 (94%)
Frame = -3
Query: 520 PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
P KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 309 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
Score = 97.9 bits (233), Expect = 6e-21
Identities = 43/56 (76%), Positives = 50/56 (89%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E +YNS MKCD+DIR+DLYANTVLSGGT MYPGIADRMQ EIT LAPST++++
Sbjct: 260 GIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 315
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 111 bits (267), Expect = 4e-25
Identities = 51/54 (94%), Positives = 51/54 (94%)
Frame = -3
Query: 520 PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
P KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 97.9 bits (233), Expect = 6e-21
Identities = 43/56 (76%), Positives = 50/56 (89%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
GI E +YNS MKCD+DIR+DLYANTVLSGGT MYPGIADRMQ EIT LAPST++++
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 329
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 110 bits (265), Expect = 7e-25
Identities = 50/50 (100%), Positives = 50/50 (100%)
Frame = -3
Query: 508 KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 326 KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
Score = 91.9 bits (218), Expect = 4e-19
Identities = 41/51 (80%), Positives = 45/51 (88%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPS 514
GI E +YNS MKCD+DIR+DLYANTVLSGGT MYPGIADRMQ EIT LAP+
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPT 324
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/52 (67%), Positives = 40/52 (76%), Gaps = 3/52 (5%)
Frame = -3
Query: 508 KIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 362
K+++ A P ERKY WIGGSIL SL TFQQMW+SK EYDESG SIV +KC
Sbjct: 384 KLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -1
Query: 627 DVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
D+DIR L++N ++GG + G +R+ + P TI+LR
Sbjct: 344 DIDIRPTLFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLR 386
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 67.7 bits (158), Expect = 7e-12
Identities = 28/54 (51%), Positives = 39/54 (72%)
Frame = -3
Query: 520 PIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 359
P D KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 321 PADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
Score = 58.0 bits (134), Expect = 6e-09
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLR 499
G+ S MKCDVD+R+ LY+N VLSGGT ++ G DR+ E+ +AP+ ++R
Sbjct: 272 GMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIR 327
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 52.8 bits (121), Expect = 2e-07
Identities = 19/53 (35%), Positives = 36/53 (67%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTI 508
G+ + + + ++C +D RR LY N L+GG + PGIA++++ E++ + P+TI
Sbjct: 451 GLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTI 503
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 50.8 bits (116), Expect = 8e-07
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = -3
Query: 538 GNHSSRPIDNKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 377
G +PID +++I+ ++Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 363 GRLKPKPID--VQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = -1
Query: 633 KCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLRSLL 490
+C +D+RR LY N VLSGG+ M+ A ++Q ++ L+ +++ L
Sbjct: 313 QCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETL 360
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/43 (51%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Frame = -3
Query: 508 KIKIIAPPERKYSVWIGGSILASL--STFQQMWISKQEYDESG 386
KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 341 KIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
Score = 47.6 bits (108), Expect = 8e-06
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVL 523
G+ E + D+D R D Y + VLSGGT MYPG+ R++ E+ L
Sbjct: 277 GLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQL 324
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = -1
Query: 633 KCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVL 523
KC +D+R+ L+ N +L+GG PG+ R++ EI V+
Sbjct: 200 KCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVI 236
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 35.9 bits (79), Expect = 0.026
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPS 514
G+ E S +C +R L N ++ GG+ +PG +R++ E+ + P+
Sbjct: 288 GVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPA 338
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 35.9 bits (79), Expect = 0.026
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -1
Query: 666 GIXEXTYNSXMKCDVDIRRDLYANTVLSGGTPMYPGIADRMQXEITVLAPS 514
G+ E S +C +R L N ++ GG+ +PG +R++ E+ + P+
Sbjct: 288 GVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPA 338
>AF016673-3|AAB66122.2| 366|Caenorhabditis elegans Hypothetical
protein T06D4.2 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = -1
Query: 570 MYPGIADRMQXEITVLAPSTIRLRSLLLQRGSTPYGSVDRSSPPSLPSNRCG 415
M P Q E + L + +R S + RGS G VD SSP PSN G
Sbjct: 1 MRPPSPPPAQREYSHLKTACLRATSFVETRGSCSSGDVDESSPSCSPSNHNG 52
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 300 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 392
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 403 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 302
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 300 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 392
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -3
Query: 484 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 323
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
>Z29116-3|CAA82372.1| 485|Caenorhabditis elegans Hypothetical
protein ZK507.6 protein.
Length = 485
Score = 27.5 bits (58), Expect = 9.1
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = -1
Query: 624 VDIRRDL---YANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLRSLLLQRGST-PYGSV 457
VD+ RDL Y N + ++ ++ Q E+ +L T +LRS+ T P S
Sbjct: 420 VDVLRDLHRMYLNASTADFKSIFYNYSETAQMEVALLPAPTDKLRSMFPSIFVTAPKSSN 479
Query: 456 DRSSP 442
D SSP
Sbjct: 480 DSSSP 484
>U20902-1|AAA84393.1| 485|Caenorhabditis elegans cyclin A protein.
Length = 485
Score = 27.5 bits (58), Expect = 9.1
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = -1
Query: 624 VDIRRDL---YANTVLSGGTPMYPGIADRMQXEITVLAPSTIRLRSLLLQRGST-PYGSV 457
VD+ RDL Y N + ++ ++ Q E+ +L T +LRS+ T P S
Sbjct: 420 VDVLRDLHRMYLNASTADFKSIFYNYSETAQMEVALLPAPTDKLRSMFPSIFVTAPKSSN 479
Query: 456 DRSSP 442
D SSP
Sbjct: 480 DSSSP 484
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,736,647
Number of Sequences: 27780
Number of extensions: 250351
Number of successful extensions: 706
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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