Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0686
         (841 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     27   0.71 
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    24   6.6  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   8.7  

>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 27.1 bits (57), Expect = 0.71
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +2

Query: 524 YRRPTRVLYHPKGRLVLHPTKVSISSNT-SARTSQXAXCVQHTAT 655
           + RPT     P+G  V  PT    S+ T +A T+Q A   +   T
Sbjct: 113 FHRPTTSTAAPEGTSVASPTTAEASTTTEAATTTQEATTTEEATT 157


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 173 YILGMSCLIIMMLLTFNYYYFYIL 102
           Y LG   ++  + +TFNY Y   L
Sbjct: 126 YFLGADAMVSTLNVTFNYTYMLYL 149


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -3

Query: 485 SGGQYEVRHVYMK*RLKRWTPRERRASLPASDFVTNAT 372
           S  Q  VRH   + +  +++P     +L A+DFV  A+
Sbjct: 275 SSSQRRVRHAGRRWKASQFSPSSFLEALFAADFVQRAS 312


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 775,921
Number of Sequences: 2352
Number of extensions: 14317
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)