Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0686
         (841 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   3.5  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      23   3.5  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   6.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   6.1  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   6.1  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 173 YILGMSCLIIMMLLTFNYYYFYILL 99
           Y+LG+ CL ++ L  +++    ILL
Sbjct: 381 YLLGIQCLTVVCLAFWSFIVSTILL 405


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 640 PAHGXIPRPGFPPPLTIKKIL 702
           P  G +P P  P P T++++L
Sbjct: 151 PRGGSLPTPVTPTPTTVQQLL 171


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 229 KRLSDYYYYYTVH 191
           KR+ DYY+ Y +H
Sbjct: 423 KRIIDYYHSYKMH 435


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 229 KRLSDYYYYYTVH 191
           KR+ DYY+ Y +H
Sbjct: 423 KRIIDYYHSYKMH 435


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 441 IKTLDAKRAAGELASF*LCY*RYCVSKGTSCKLIAFD 331
           + TL   +  GELA    C     ++  T C+L A D
Sbjct: 156 LSTLAPGKVLGELAILYNCKRTATITAATDCQLWAID 192


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,165
Number of Sequences: 438
Number of extensions: 4515
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)