Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0686
         (841 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g28860.1 68415.m03508 cytochrome P450 family protein similar ...    28   6.7  
At2g28850.1 68415.m03507 cytochrome P450 family protein similar ...    28   6.7  
At2g25470.1 68415.m03050 leucine-rich repeat family protein cont...    28   8.9  

>At2g28860.1 68415.m03508 cytochrome P450 family protein similar to
           Cytochrome P450 61 (C-22 sterol desaturase) (SP:P54781)
           {Saccharomyces cerevisiae}
          Length = 493

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +3

Query: 405 ARPPLSWRPAF*SSLHIYMSDFILAAAKSMPKIYYIIPSL 524
           AR  L +RP      H+ +SDF L  + ++PK   + PSL
Sbjct: 353 AREVLRYRPPASMIPHVAVSDFRLTESYTIPKGTIVFPSL 392


>At2g28850.1 68415.m03507 cytochrome P450 family protein similar to
           Cytochrome P450 61 (C-22 sterol desaturase) (SP:P54781) 
           {Saccharomyces cerevisiae}
          Length = 493

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +3

Query: 405 ARPPLSWRPAF*SSLHIYMSDFILAAAKSMPKIYYIIPSL 524
           AR  L +RP      H+ +SDF L  + ++PK   + PSL
Sbjct: 353 AREVLRYRPPASMVPHVAVSDFRLTESYTIPKGTIVFPSL 392


>At2g25470.1 68415.m03050 leucine-rich repeat family protein
           contains leucine rich-repeat (LRR) domains Pfam:PF00560,
           INTERPRO:IPR001611; contains similarity to disease
           resistance protein [Lycopersicon esculentum]
           gi|3894383|gb|AAC78591
          Length = 910

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/21 (52%), Positives = 17/21 (80%)
 Frame = -1

Query: 544 YAGRSPVSEGII*YIFGIDLA 482
           Y+GRS  SEGI+  ++G+DL+
Sbjct: 709 YSGRSEFSEGILRLMYGMDLS 729


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,619,900
Number of Sequences: 28952
Number of extensions: 288016
Number of successful extensions: 540
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 540
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1941125600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)