Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0685
(855 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M64590-1|AAA36463.1| 1020|Homo sapiens glycine decarboxylase pro... 154 3e-37
M63635-1|AAA36478.1| 1020|Homo sapiens glycine decarboxylase pro... 154 3e-37
D90239-1|BAA14286.1| 1020|Homo sapiens glycine decarboxylase pre... 154 3e-37
BC111995-1|AAI11996.1| 1020|Homo sapiens glycine dehydrogenase (... 154 3e-37
BC111993-1|AAI11994.1| 1020|Homo sapiens glycine dehydrogenase (... 154 3e-37
AL353718-2|CAH74116.1| 1036|Homo sapiens glycine dehydrogenase (... 154 3e-37
AL162411-3|CAH69992.1| 1036|Homo sapiens glycine dehydrogenase (... 154 3e-37
>M64590-1|AAA36463.1| 1020|Homo sapiens glycine decarboxylase
protein.
Length = 1020
Score = 154 bits (374), Expect = 3e-37
Identities = 69/92 (75%), Positives = 78/92 (84%)
Frame = +2
Query: 254 GYHNCCVPHAIMRNMFENPGWTTQYTPYQPXVAQGRLESLLNYQTMVSDMTGLDVANASL 433
GY+NC VP I+RN+ EN GW TQYTPYQP V+QGRLESLLNYQTMV D+TGLD+ANASL
Sbjct: 137 GYYNCSVPQTILRNLLENSGWITQYTPYQPEVSQGRLESLLNYQTMVCDITGLDMANASL 196
Query: 434 LDEGTAAAEALSLCHRHNKRTKFVVLNDCXPR 529
LDEGTAAAEAL LC+RHNKR KF+V C P+
Sbjct: 197 LDEGTAAAEALQLCYRHNKRRKFLVDPRCHPQ 228
Score = 59.7 bits (138), Expect = 1e-08
Identities = 26/68 (38%), Positives = 41/68 (60%)
Frame = +3
Query: 51 GPRXQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEKNE 230
GP +D ML LG S+D+L VP I+ + + + +P+ E +++ + I+ KN+
Sbjct: 69 GPGDKDQREMLQTLGLASIDELIEKTVPANIRLKRPLKMEDPVCENEILATLHAISSKNQ 128
Query: 231 IWRSYIGM 254
IWRSYIGM
Sbjct: 129 IWRSYIGM 136
Score = 40.7 bits (91), Expect = 0.007
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 514 RLXPQTLAVVHTRMDALG-LDVLVVPDVRHVDFAQRDISAVLLQCPDTRG 660
R PQT+AVV TR G L L +P +DF+ +D+S VL Q PDT G
Sbjct: 224 RCHPQTIAVVQTRAKYTGVLTELKLPC--EMDFSGKDVSGVLFQYPDTEG 271
>M63635-1|AAA36478.1| 1020|Homo sapiens glycine decarboxylase
protein.
Length = 1020
Score = 154 bits (374), Expect = 3e-37
Identities = 69/92 (75%), Positives = 78/92 (84%)
Frame = +2
Query: 254 GYHNCCVPHAIMRNMFENPGWTTQYTPYQPXVAQGRLESLLNYQTMVSDMTGLDVANASL 433
GY+NC VP I+RN+ EN GW TQYTPYQP V+QGRLESLLNYQTMV D+TGLD+ANASL
Sbjct: 137 GYYNCSVPQTILRNLLENSGWITQYTPYQPEVSQGRLESLLNYQTMVCDITGLDMANASL 196
Query: 434 LDEGTAAAEALSLCHRHNKRTKFVVLNDCXPR 529
LDEGTAAAEAL LC+RHNKR KF+V C P+
Sbjct: 197 LDEGTAAAEALQLCYRHNKRRKFLVDPRCHPQ 228
Score = 59.7 bits (138), Expect = 1e-08
Identities = 26/68 (38%), Positives = 41/68 (60%)
Frame = +3
Query: 51 GPRXQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEKNE 230
GP +D ML LG S+D+L VP I+ + + + +P+ E +++ + I+ KN+
Sbjct: 69 GPGDKDQREMLQTLGLASIDELIEKTVPANIRLKRPLKMEDPVCENEILATLHAISSKNQ 128
Query: 231 IWRSYIGM 254
IWRSYIGM
Sbjct: 129 IWRSYIGM 136
Score = 40.7 bits (91), Expect = 0.007
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 514 RLXPQTLAVVHTRMDALG-LDVLVVPDVRHVDFAQRDISAVLLQCPDTRG 660
R PQT+AVV TR G L L +P +DF+ +D+S VL Q PDT G
Sbjct: 224 RCHPQTIAVVQTRAKYTGVLTELKLPC--EMDFSGKDVSGVLFQYPDTEG 271
>D90239-1|BAA14286.1| 1020|Homo sapiens glycine decarboxylase
precursor protein.
Length = 1020
Score = 154 bits (374), Expect = 3e-37
Identities = 69/92 (75%), Positives = 78/92 (84%)
Frame = +2
Query: 254 GYHNCCVPHAIMRNMFENPGWTTQYTPYQPXVAQGRLESLLNYQTMVSDMTGLDVANASL 433
GY+NC VP I+RN+ EN GW TQYTPYQP V+QGRLESLLNYQTMV D+TGLD+ANASL
Sbjct: 137 GYYNCSVPQTILRNLLENSGWITQYTPYQPEVSQGRLESLLNYQTMVCDITGLDMANASL 196
Query: 434 LDEGTAAAEALSLCHRHNKRTKFVVLNDCXPR 529
LDEGTAAAEAL LC+RHNKR KF+V C P+
Sbjct: 197 LDEGTAAAEALQLCYRHNKRRKFLVDPRCHPQ 228
Score = 59.7 bits (138), Expect = 1e-08
Identities = 26/68 (38%), Positives = 41/68 (60%)
Frame = +3
Query: 51 GPRXQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEKNE 230
GP +D ML LG S+D+L VP I+ + + + +P+ E +++ + I+ KN+
Sbjct: 69 GPGDKDQREMLQTLGLASIDELIEKTVPANIRLKRPLKMEDPVCENEILATLHAISSKNQ 128
Query: 231 IWRSYIGM 254
IWRSYIGM
Sbjct: 129 IWRSYIGM 136
Score = 40.7 bits (91), Expect = 0.007
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 514 RLXPQTLAVVHTRMDALG-LDVLVVPDVRHVDFAQRDISAVLLQCPDTRG 660
R PQT+AVV TR G L L +P +DF+ +D+S VL Q PDT G
Sbjct: 224 RCHPQTIAVVQTRAKYTGVLTELKLPC--EMDFSGKDVSGVLFQYPDTEG 271
>BC111995-1|AAI11996.1| 1020|Homo sapiens glycine dehydrogenase
(decarboxylating) protein.
Length = 1020
Score = 154 bits (374), Expect = 3e-37
Identities = 69/92 (75%), Positives = 78/92 (84%)
Frame = +2
Query: 254 GYHNCCVPHAIMRNMFENPGWTTQYTPYQPXVAQGRLESLLNYQTMVSDMTGLDVANASL 433
GY+NC VP I+RN+ EN GW TQYTPYQP V+QGRLESLLNYQTMV D+TGLD+ANASL
Sbjct: 137 GYYNCSVPQTILRNLLENSGWITQYTPYQPEVSQGRLESLLNYQTMVCDITGLDMANASL 196
Query: 434 LDEGTAAAEALSLCHRHNKRTKFVVLNDCXPR 529
LDEGTAAAEAL LC+RHNKR KF+V C P+
Sbjct: 197 LDEGTAAAEALQLCYRHNKRRKFLVDPRCHPQ 228
Score = 59.7 bits (138), Expect = 1e-08
Identities = 26/68 (38%), Positives = 41/68 (60%)
Frame = +3
Query: 51 GPRXQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEKNE 230
GP +D ML LG S+D+L VP I+ + + + +P+ E +++ + I+ KN+
Sbjct: 69 GPGDKDQREMLQTLGLASIDELIEKTVPANIRLKRPLKMEDPVCENEILATLHAISSKNQ 128
Query: 231 IWRSYIGM 254
IWRSYIGM
Sbjct: 129 IWRSYIGM 136
Score = 40.7 bits (91), Expect = 0.007
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 514 RLXPQTLAVVHTRMDALG-LDVLVVPDVRHVDFAQRDISAVLLQCPDTRG 660
R PQT+AVV TR G L L +P +DF+ +D+S VL Q PDT G
Sbjct: 224 RCHPQTIAVVQTRAKYTGVLTELKLPC--EMDFSGKDVSGVLFQYPDTEG 271
>BC111993-1|AAI11994.1| 1020|Homo sapiens glycine dehydrogenase
(decarboxylating) protein.
Length = 1020
Score = 154 bits (374), Expect = 3e-37
Identities = 69/92 (75%), Positives = 78/92 (84%)
Frame = +2
Query: 254 GYHNCCVPHAIMRNMFENPGWTTQYTPYQPXVAQGRLESLLNYQTMVSDMTGLDVANASL 433
GY+NC VP I+RN+ EN GW TQYTPYQP V+QGRLESLLNYQTMV D+TGLD+ANASL
Sbjct: 137 GYYNCSVPQTILRNLLENSGWITQYTPYQPEVSQGRLESLLNYQTMVCDITGLDMANASL 196
Query: 434 LDEGTAAAEALSLCHRHNKRTKFVVLNDCXPR 529
LDEGTAAAEAL LC+RHNKR KF+V C P+
Sbjct: 197 LDEGTAAAEALQLCYRHNKRRKFLVDPRCHPQ 228
Score = 59.7 bits (138), Expect = 1e-08
Identities = 26/68 (38%), Positives = 41/68 (60%)
Frame = +3
Query: 51 GPRXQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEKNE 230
GP +D ML LG S+D+L VP I+ + + + +P+ E +++ + I+ KN+
Sbjct: 69 GPGDKDQREMLQTLGLASIDELIEKTVPANIRLKRPLKMEDPVCENEILATLHAISSKNQ 128
Query: 231 IWRSYIGM 254
IWRSYIGM
Sbjct: 129 IWRSYIGM 136
Score = 40.7 bits (91), Expect = 0.007
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 514 RLXPQTLAVVHTRMDALG-LDVLVVPDVRHVDFAQRDISAVLLQCPDTRG 660
R PQT+AVV TR G L L +P +DF+ +D+S VL Q PDT G
Sbjct: 224 RCHPQTIAVVQTRAKYTGVLTELKLPC--EMDFSGKDVSGVLFQYPDTEG 271
>AL353718-2|CAH74116.1| 1036|Homo sapiens glycine dehydrogenase
(decarboxylating) protein.
Length = 1036
Score = 154 bits (374), Expect = 3e-37
Identities = 69/92 (75%), Positives = 78/92 (84%)
Frame = +2
Query: 254 GYHNCCVPHAIMRNMFENPGWTTQYTPYQPXVAQGRLESLLNYQTMVSDMTGLDVANASL 433
GY+NC VP I+RN+ EN GW TQYTPYQP V+QGRLESLLNYQTMV D+TGLD+ANASL
Sbjct: 137 GYYNCSVPQTILRNLLENSGWITQYTPYQPEVSQGRLESLLNYQTMVCDITGLDMANASL 196
Query: 434 LDEGTAAAEALSLCHRHNKRTKFVVLNDCXPR 529
LDEGTAAAEAL LC+RHNKR KF+V C P+
Sbjct: 197 LDEGTAAAEALQLCYRHNKRRKFLVDPRCHPQ 228
Score = 59.7 bits (138), Expect = 1e-08
Identities = 26/68 (38%), Positives = 41/68 (60%)
Frame = +3
Query: 51 GPRXQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEKNE 230
GP +D ML LG S+D+L VP I+ + + + +P+ E +++ + I+ KN+
Sbjct: 69 GPGDKDQREMLQTLGLASIDELIEKTVPANIRLKRPLKMEDPVCENEILATLHAISSKNQ 128
Query: 231 IWRSYIGM 254
IWRSYIGM
Sbjct: 129 IWRSYIGM 136
Score = 40.7 bits (91), Expect = 0.007
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 514 RLXPQTLAVVHTRMDALG-LDVLVVPDVRHVDFAQRDISAVLLQCPDTRG 660
R PQT+AVV TR G L L +P +DF+ +D+S VL Q PDT G
Sbjct: 224 RCHPQTIAVVQTRAKYTGVLTELKLPC--EMDFSGKDVSGVLFQYPDTEG 271
>AL162411-3|CAH69992.1| 1036|Homo sapiens glycine dehydrogenase
(decarboxylating) protein.
Length = 1036
Score = 154 bits (374), Expect = 3e-37
Identities = 69/92 (75%), Positives = 78/92 (84%)
Frame = +2
Query: 254 GYHNCCVPHAIMRNMFENPGWTTQYTPYQPXVAQGRLESLLNYQTMVSDMTGLDVANASL 433
GY+NC VP I+RN+ EN GW TQYTPYQP V+QGRLESLLNYQTMV D+TGLD+ANASL
Sbjct: 137 GYYNCSVPQTILRNLLENSGWITQYTPYQPEVSQGRLESLLNYQTMVCDITGLDMANASL 196
Query: 434 LDEGTAAAEALSLCHRHNKRTKFVVLNDCXPR 529
LDEGTAAAEAL LC+RHNKR KF+V C P+
Sbjct: 197 LDEGTAAAEALQLCYRHNKRRKFLVDPRCHPQ 228
Score = 59.7 bits (138), Expect = 1e-08
Identities = 26/68 (38%), Positives = 41/68 (60%)
Frame = +3
Query: 51 GPRXQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLMNISEPISEYDLIERVRLIAEKNE 230
GP +D ML LG S+D+L VP I+ + + + +P+ E +++ + I+ KN+
Sbjct: 69 GPGDKDQREMLQTLGLASIDELIEKTVPANIRLKRPLKMEDPVCENEILATLHAISSKNQ 128
Query: 231 IWRSYIGM 254
IWRSYIGM
Sbjct: 129 IWRSYIGM 136
Score = 40.7 bits (91), Expect = 0.007
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 514 RLXPQTLAVVHTRMDALG-LDVLVVPDVRHVDFAQRDISAVLLQCPDTRG 660
R PQT+AVV TR G L L +P +DF+ +D+S VL Q PDT G
Sbjct: 224 RCHPQTIAVVQTRAKYTGVLTELKLPC--EMDFSGKDVSGVLFQYPDTEG 271
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,305,322
Number of Sequences: 237096
Number of extensions: 2525012
Number of successful extensions: 3801
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3794
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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