Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0684
         (800 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   2.1  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   4.8  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     24   4.8  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    24   6.3  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           23   8.3  

>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +1

Query: 253 PLQNGGVSIVGLFQSRRHP**ARQLREVPVAILTTAIIQRFLPGDV*FQLCI 408
           PL++ G++ +    +  HP  A  L  VP A LT A+ Q+  P    FQ C+
Sbjct: 418 PLRSIGLTELDQIAASMHPRKAPGLDGVPNAALTVALRQQPEPFRRVFQECL 469


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -2

Query: 481  RSVETWSWCIAFWYCASELHFISGEY 404
            RS  T ++ IA W C S   F   EY
Sbjct: 1038 RSYATVAFLIALWSCVSTPFFFLDEY 1063


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
 Frame = +2

Query: 602 PYTCSLS--TSTRXEHWGCDXLVYED 673
           P  CS +    TR EH GC+ L+  D
Sbjct: 324 PRRCSRARYNETRDEHMGCNFLISSD 349


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = -1

Query: 677 CNPRTLVXRSPNVLXASKYSGCRCTAG 597
           CN  T    S  V   S Y GC+C  G
Sbjct: 222 CNQITCSGISTEVCRRSCYCGCQCRRG 248


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 12/57 (21%), Positives = 19/57 (33%)
 Frame = +2

Query: 455 TPTPSFNATWTAFALPNTPIPATEWAPLLEDRFNRTGQNVQSLPNKADPPYTCSLST 625
           TP P+   TW+    P      T W                +  ++  PP T + +T
Sbjct: 198 TPAPTTTTTWSDLPPPPPTTTTTVWIDPTATTTTHAPTTTTTWSDQPPPPPTTTTTT 254


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 735,104
Number of Sequences: 2352
Number of extensions: 14698
Number of successful extensions: 33
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)