Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0684
(800 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29377-1|AAZ94294.1| 773|Caenorhabditis elegans Hypothetical pr... 34 0.10
AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical... 32 0.55
Z81560-5|CAB04550.2| 123|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF067616-4|AAC19193.1| 373|Caenorhabditis elegans Hypothetical ... 31 1.3
Z54327-13|CAE48494.1| 619|Caenorhabditis elegans Hypothetical p... 28 8.9
Z54327-11|CAD56556.1| 589|Caenorhabditis elegans Hypothetical p... 28 8.9
Z54307-9|CAE48498.1| 619|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z54307-7|CAD56576.1| 589|Caenorhabditis elegans Hypothetical pr... 28 8.9
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 28 8.9
>U29377-1|AAZ94294.1| 773|Caenorhabditis elegans Hypothetical
protein K05F1.6a protein.
Length = 773
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = +2
Query: 233 KVKRDDNPYKMVESQLSDSFNLDGILSELGSFGKYQXXXXXXXXXXXXXXAMCNFNYVFT 412
++ RD N + E + +D + +GIL+ +G +Q AM N N V+
Sbjct: 96 QIYRDVNKKERKEGKPTDPIDFEGILNIIGGCRWWQIWIYVLIALQQIPHAMFNLNVVYM 155
Query: 413 ADEVKFRCAIP 445
+ +F+C +P
Sbjct: 156 MYDPEFQCMVP 166
>AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical
protein B0511.12 protein.
Length = 1634
Score = 31.9 bits (69), Expect = 0.55
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -3
Query: 447 SGIAHLNFTSSAVNT*LKLHIARKESLNDSSSKNSNWYFPKLPSSL 310
S + L TS++ ++L + R+E SSS S+ Y P LPSS+
Sbjct: 31 SSVTVLPSTSNSQTQTVQLPLTRRERALSSSSNESSTYMPTLPSSV 76
>Z81560-5|CAB04550.2| 123|Caenorhabditis elegans Hypothetical
protein K02E2.6 protein.
Length = 123
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = -3
Query: 543 SSRGAHSVAGIGVFGKANAVHVALKLGVGVSHSGIAHLNFTSSAVNT*LKLHIA 382
++RG V +GV GK VHV L G G+S+ I+ +N L+ H A
Sbjct: 21 NNRGRLPVVQVGVNGKV--VHVLLDTGAGISYLPISKINLKDLDPTYQLQAHAA 72
>AF067616-4|AAC19193.1| 373|Caenorhabditis elegans Hypothetical
protein F29C4.6 protein.
Length = 373
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -3
Query: 582 NDCTFCPVLLNRSSSRGAHSVAGIGVFGKANAVHVALKLGVGVSHSGIAHLNFTSSAV 409
N+CTFC V ++ RGA + + NA +A L + V IA L ++ V
Sbjct: 145 NNCTFCGVFRRQALDRGAFKIGATKLVTGHNADDMAETLLMNVLRGDIARLERCTNIV 202
>Z54327-13|CAE48494.1| 619|Caenorhabditis elegans Hypothetical
protein F14F11.1h protein.
Length = 619
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 398 NYVFTADEVKFRCAIPECDTPTPSFNATWTAFALPNTPIPATEWAPLLED 547
NY T+D+V + DTP + +++ +F + P+P+ ++ + ED
Sbjct: 8 NYDRTSDDVDASKEV--VDTPIQTISSSHVSFQITTDPVPSMDYLSIHED 55
>Z54327-11|CAD56556.1| 589|Caenorhabditis elegans Hypothetical
protein F14F11.1b protein.
Length = 589
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 398 NYVFTADEVKFRCAIPECDTPTPSFNATWTAFALPNTPIPATEWAPLLED 547
NY T+D+V + DTP + +++ +F + P+P+ ++ + ED
Sbjct: 8 NYDRTSDDVDASKEV--VDTPIQTISSSHVSFQITTDPVPSMDYLSIHED 55
>Z54307-9|CAE48498.1| 619|Caenorhabditis elegans Hypothetical
protein F14F11.1h protein.
Length = 619
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 398 NYVFTADEVKFRCAIPECDTPTPSFNATWTAFALPNTPIPATEWAPLLED 547
NY T+D+V + DTP + +++ +F + P+P+ ++ + ED
Sbjct: 8 NYDRTSDDVDASKEV--VDTPIQTISSSHVSFQITTDPVPSMDYLSIHED 55
>Z54307-7|CAD56576.1| 589|Caenorhabditis elegans Hypothetical
protein F14F11.1b protein.
Length = 589
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 398 NYVFTADEVKFRCAIPECDTPTPSFNATWTAFALPNTPIPATEWAPLLED 547
NY T+D+V + DTP + +++ +F + P+P+ ++ + ED
Sbjct: 8 NYDRTSDDVDASKEV--VDTPIQTISSSHVSFQITTDPVPSMDYLSIHED 55
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +2
Query: 434 CAIPECDTPTPSFNATWTAFALPNTPIPATEWAPLLEDRFNRTGQNVQSLPNKADPPYTC 613
C PE P +N + T++ P T ++ + + E + T S P PP T
Sbjct: 247 CDFPESVKDCPEYNGSETSYRAPKTTTSSSSYGSIAEAPVDPTPYAPASAP-VYSPPRTT 305
Query: 614 SLSTST 631
+ ST
Sbjct: 306 YVPRST 311
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,028,286
Number of Sequences: 27780
Number of extensions: 313631
Number of successful extensions: 846
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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