Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0681
         (744 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118361-1|AAM48390.1|  622|Drosophila melanogaster RE07082p pro...    29   5.1  
AM412966-1|CAL85589.1|  265|Drosophila melanogaster Fst protein.       29   5.1  
AM412965-1|CAL85588.1|  262|Drosophila melanogaster Fst protein.       29   5.1  
AM412964-1|CAL85587.1|  266|Drosophila melanogaster Fst protein.       29   5.1  
AM412963-1|CAL85586.1|  266|Drosophila melanogaster Fst protein.       29   5.1  
AE014298-1223|AAF46406.1|  622|Drosophila melanogaster CG1787-PA...    29   5.1  
AE014297-995|AAF54420.1|  286|Drosophila melanogaster CG9434-PA ...    29   5.1  
AB059240-1|BAB40791.1|  278|Drosophila melanogaster Frost protein.     29   5.1  
AB043874-1|BAB40785.1|  278|Drosophila melanogaster frost protei...    29   5.1  
AY071142-1|AAL48764.1|  572|Drosophila melanogaster RE17942p pro...    29   6.7  
AF223064-1|AAF34687.1|  571|Drosophila melanogaster putative mic...    29   6.7  
AE014297-195|AAF52059.2|  572|Drosophila melanogaster CG10229-PA...    29   6.7  
X15586-1|CAA33611.1| 1443|Drosophila melanogaster protein ( D.me...    29   8.8  
AY122087-1|AAM52599.1| 1529|Drosophila melanogaster GH02912p pro...    29   8.8  
AY118719-1|AAM50579.1|  512|Drosophila melanogaster AT29177p pro...    29   8.8  
AF050630-1|AAD09205.1|  884|Drosophila melanogaster Ahr homolog ...    29   8.8  
AE014297-2199|AAF55308.1|  884|Drosophila melanogaster CG6993-PA...    29   8.8  
AE014134-551|AAF51149.1| 2409|Drosophila melanogaster CG3524-PA ...    29   8.8  

>AY118361-1|AAM48390.1|  622|Drosophila melanogaster RE07082p
           protein.
          Length = 622

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 384 RACRCSCGRASSAWPRPHPRGPTWSRR 464
           R CR SCG+  + WP P  +  T S R
Sbjct: 81  RDCRLSCGKYGAIWPMPTGKECTISHR 107


>AM412966-1|CAL85589.1|  265|Drosophila melanogaster Fst protein.
          Length = 265

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 16/40 (40%), Positives = 16/40 (40%)
 Frame = -3

Query: 487 GAGQGQAHRRLHVGPRGCGRGHAEDARPQEHRQARPGPVP 368
           G GQG  H   H G  G   GH      Q H   RP P P
Sbjct: 64  GLGQGNGHGNNHHGHHGNNHGHGNG---QGHGGQRPPPPP 100


>AM412965-1|CAL85588.1|  262|Drosophila melanogaster Fst protein.
          Length = 262

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 16/40 (40%), Positives = 16/40 (40%)
 Frame = -3

Query: 487 GAGQGQAHRRLHVGPRGCGRGHAEDARPQEHRQARPGPVP 368
           G GQG  H   H G  G   GH      Q H   RP P P
Sbjct: 64  GLGQGNGHGNNHHGHHGNNHGHGNG---QGHGGQRPPPPP 100


>AM412964-1|CAL85587.1|  266|Drosophila melanogaster Fst protein.
          Length = 266

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 16/40 (40%), Positives = 16/40 (40%)
 Frame = -3

Query: 487 GAGQGQAHRRLHVGPRGCGRGHAEDARPQEHRQARPGPVP 368
           G GQG  H   H G  G   GH      Q H   RP P P
Sbjct: 64  GLGQGNGHGNNHHGHHGNNHGHGNG---QGHGGQRPPPPP 100


>AM412963-1|CAL85586.1|  266|Drosophila melanogaster Fst protein.
          Length = 266

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 16/40 (40%), Positives = 16/40 (40%)
 Frame = -3

Query: 487 GAGQGQAHRRLHVGPRGCGRGHAEDARPQEHRQARPGPVP 368
           G GQG  H   H G  G   GH      Q H   RP P P
Sbjct: 64  GLGQGNGHGNNHHGHHGNNHGHGNG---QGHGGQRPPPPP 100


>AE014298-1223|AAF46406.1|  622|Drosophila melanogaster CG1787-PA
           protein.
          Length = 622

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 384 RACRCSCGRASSAWPRPHPRGPTWSRR 464
           R CR SCG+  + WP P  +  T S R
Sbjct: 81  RDCRLSCGKYGAIWPMPTGKECTISHR 107


>AE014297-995|AAF54420.1|  286|Drosophila melanogaster CG9434-PA
           protein.
          Length = 286

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 16/40 (40%), Positives = 16/40 (40%)
 Frame = -3

Query: 487 GAGQGQAHRRLHVGPRGCGRGHAEDARPQEHRQARPGPVP 368
           G GQG  H   H G  G   GH      Q H   RP P P
Sbjct: 82  GLGQGNGHGNNHHGHHGNSHGHGNG---QGHGGQRPPPPP 118


>AB059240-1|BAB40791.1|  278|Drosophila melanogaster Frost protein.
          Length = 278

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 16/40 (40%), Positives = 16/40 (40%)
 Frame = -3

Query: 487 GAGQGQAHRRLHVGPRGCGRGHAEDARPQEHRQARPGPVP 368
           G GQG  H   H G  G   GH      Q H   RP P P
Sbjct: 82  GLGQGNGHGNNHHGHHGNNHGHGNG---QGHGGQRPPPPP 118


>AB043874-1|BAB40785.1|  278|Drosophila melanogaster frost protein
           protein.
          Length = 278

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 16/40 (40%), Positives = 16/40 (40%)
 Frame = -3

Query: 487 GAGQGQAHRRLHVGPRGCGRGHAEDARPQEHRQARPGPVP 368
           G GQG  H   H G  G   GH      Q H   RP P P
Sbjct: 82  GLGQGNGHGNNHHGHHGNNHGHGNG---QGHGGQRPPPPP 118


>AY071142-1|AAL48764.1|  572|Drosophila melanogaster RE17942p
           protein.
          Length = 572

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -3

Query: 691 LLWNXLTFLPARQXASSAXPVRGGKWTSVSDQ 596
           + +  L  L ARQ  ++A P+R GKW+ ++ Q
Sbjct: 51  IYYEGLQGLLARQLKATADPLRKGKWSMINQQ 82


>AF223064-1|AAF34687.1|  571|Drosophila melanogaster putative
           microtubule severingprotein katanin p60 subunit protein.
          Length = 571

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -3

Query: 691 LLWNXLTFLPARQXASSAXPVRGGKWTSVSDQ 596
           + +  L  L ARQ  ++A P+R GKW+ ++ Q
Sbjct: 51  IYYEGLQGLLARQLKATADPLRKGKWSMINQQ 82


>AE014297-195|AAF52059.2|  572|Drosophila melanogaster CG10229-PA
           protein.
          Length = 572

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -3

Query: 691 LLWNXLTFLPARQXASSAXPVRGGKWTSVSDQ 596
           + +  L  L ARQ  ++A P+R GKW+ ++ Q
Sbjct: 51  IYYEGLQGLLARQLKATADPLRKGKWSMINQQ 82


>X15586-1|CAA33611.1| 1443|Drosophila melanogaster protein (
            D.melanogaster 75B mRNAencoding hypothetical 75B protein.
            ).
          Length = 1443

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 499  DAVPARRTVSPRPCWN 546
            D  P R   +PRPCWN
Sbjct: 1301 DGAPVRDRTAPRPCWN 1316


>AY122087-1|AAM52599.1| 1529|Drosophila melanogaster GH02912p
           protein.
          Length = 1529

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 13/39 (33%), Positives = 25/39 (64%)
 Frame = -1

Query: 480 GKVKPIVDSTWALEDVGEAMQKMHDRKNIGKLVLDPSLE 364
           G V+P+  + +A +++ +A + M   K+IGK+V+   LE
Sbjct: 848 GAVQPLPTTVFAEQEIEKAFRFMASGKHIGKVVIKVRLE 886


>AY118719-1|AAM50579.1|  512|Drosophila melanogaster AT29177p
           protein.
          Length = 512

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 6/110 (5%)
 Frame = -3

Query: 685 WNXLTFLPARQXASSAXPVR------GGKWTSVSDQTVRREQEPGGLELRHLCSSTGAGT 524
           WN    LP +  ++S            G +++ S  T  ++Q+   L+     S  G G+
Sbjct: 348 WNGTKELPGKSGSASTPESYQMQHDDSGLYSASSHTTSPQQQQQQQLQQ----SQRGVGS 403

Query: 523 RCGAPAQRLHSVGAGQGQAHRRLHVGPRGCGRGHAEDARPQEHRQARPGP 374
              AP+  L S G  Q   H      P  C +   +  + Q+H  A P P
Sbjct: 404 NVSAPSSSLTSTGTDQQAVH------PSSCHQ--QQQQQQQQHHHAHPHP 445


>AF050630-1|AAD09205.1|  884|Drosophila melanogaster Ahr homolog
            spineless protein.
          Length = 884

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 6/110 (5%)
 Frame = -3

Query: 685  WNXLTFLPARQXASSAXPVR------GGKWTSVSDQTVRREQEPGGLELRHLCSSTGAGT 524
            WN    LP +  ++S            G +++ S  T  ++Q+   L+     S  G G+
Sbjct: 720  WNGTKELPGKSGSASTPESYQMQHDDSGLYSASSHTTSPQQQQQQQLQQ----SQRGVGS 775

Query: 523  RCGAPAQRLHSVGAGQGQAHRRLHVGPRGCGRGHAEDARPQEHRQARPGP 374
               AP+  L S G  Q   H      P  C +   +  + Q+H  A P P
Sbjct: 776  NVSAPSSSLTSTGTDQQAVH------PSSCHQ--QQQQQQQQHHHAHPHP 817


>AE014297-2199|AAF55308.1|  884|Drosophila melanogaster CG6993-PA
            protein.
          Length = 884

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 6/110 (5%)
 Frame = -3

Query: 685  WNXLTFLPARQXASSAXPVR------GGKWTSVSDQTVRREQEPGGLELRHLCSSTGAGT 524
            WN    LP +  ++S            G +++ S  T  ++Q+   L+     S  G G+
Sbjct: 720  WNGTKELPGKSGSASTPESYQMQHDDSGLYSASSHTTSPQQQQQQQLQQ----SQRGVGS 775

Query: 523  RCGAPAQRLHSVGAGQGQAHRRLHVGPRGCGRGHAEDARPQEHRQARPGP 374
               AP+  L S G  Q   H      P  C +   +  + Q+H  A P P
Sbjct: 776  NVSAPSSSLTSTGTDQQAVH------PSSCHQ--QQQQQQQQHHHAHPHP 817


>AE014134-551|AAF51149.1| 2409|Drosophila melanogaster CG3524-PA
            protein.
          Length = 2409

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 13/39 (33%), Positives = 25/39 (64%)
 Frame = -1

Query: 480  GKVKPIVDSTWALEDVGEAMQKMHDRKNIGKLVLDPSLE 364
            G V+P+  + +A +++ +A + M   K+IGK+V+   LE
Sbjct: 1728 GAVQPLPTTVFAEQEIEKAFRFMASGKHIGKVVIKVRLE 1766


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,229,671
Number of Sequences: 53049
Number of extensions: 505313
Number of successful extensions: 1377
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1365
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)