Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0679
(676 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 178 4e-45
03_01_0547 + 4093196-4093657,4094267-4095148 178 4e-45
03_01_0544 + 4082528-4082989,4083585-4084466 178 4e-45
03_01_0543 + 4076981-4077442,4078145-4079026 178 4e-45
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 105 4e-23
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 105 4e-23
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 69 5e-12
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 60 2e-09
02_04_0462 + 23131433-23132836 54 1e-07
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 50 2e-06
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 46 4e-05
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 42 5e-04
04_01_0103 + 1082077-1082167,1083037-1085477 41 0.001
02_04_0017 + 18937774-18937864,18938505-18940945 41 0.001
01_06_0662 + 30987187-30987277,30987825-30990214 36 0.022
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 35 0.052
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 32 0.48
03_05_0511 + 25056018-25059107 32 0.48
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 31 0.64
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 31 0.64
02_04_0148 - 20198407-20201424 30 1.9
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 30 1.9
04_01_0530 - 6928528-6929500,6929514-6930964 29 3.4
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 28 7.8
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 178 bits (433), Expect = 4e-45
Identities = 85/116 (73%), Positives = 90/116 (77%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWGI 223
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAW +
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 224 GXTKGXX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIV 391
K ALWKFET+ YY T+IDAP HRDFI NM TGTSQ DCAVLI+
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLII 116
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3
Query: 447 REHALLAFNPRCQTAHRRGXQMXSTXPPYSEXRFLGNPEGSIPYIKKIGYNP-VCRFRXH 623
REHALLAF + +M +T P YS+ R+ + Y+KK+GYNP F
Sbjct: 134 REHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPI 193
Query: 624 FGXHXDNMLXPST 662
G DNM+ ST
Sbjct: 194 SGFEGDNMIERST 206
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 178 bits (433), Expect = 4e-45
Identities = 85/116 (73%), Positives = 90/116 (77%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWGI 223
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAW +
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 224 GXTKGXX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIV 391
K ALWKFET+ YY T+IDAP HRDFI NM TGTSQ DCAVLI+
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLII 116
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3
Query: 447 REHALLAFNPRCQTAHRRGXQMXSTXPPYSEXRFLGNPEGSIPYIKKIGYNP-VCRFRXH 623
REHALLAF + +M +T P YS+ R+ + Y+KK+GYNP F
Sbjct: 134 REHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPI 193
Query: 624 FGXHXDNMLXPST 662
G DNM+ ST
Sbjct: 194 SGFEGDNMIERST 206
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 178 bits (433), Expect = 4e-45
Identities = 85/116 (73%), Positives = 90/116 (77%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWGI 223
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAW +
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 224 GXTKGXX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIV 391
K ALWKFET+ YY T+IDAP HRDFI NM TGTSQ DCAVLI+
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLII 116
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3
Query: 447 REHALLAFNPRCQTAHRRGXQMXSTXPPYSEXRFLGNPEGSIPYIKKIGYNP-VCRFRXH 623
REHALLAF + +M +T P YS+ R+ + Y+KK+GYNP F
Sbjct: 134 REHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPI 193
Query: 624 FGXHXDNMLXPST 662
G DNM+ ST
Sbjct: 194 SGFEGDNMIERST 206
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 178 bits (433), Expect = 4e-45
Identities = 85/116 (73%), Positives = 90/116 (77%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWGI 223
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAW +
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 224 GXTKGXX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIV 391
K ALWKFET+ YY T+IDAP HRDFI NM TGTSQ DCAVLI+
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLII 116
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3
Query: 447 REHALLAFNPRCQTAHRRGXQMXSTXPPYSEXRFLGNPEGSIPYIKKIGYNP-VCRFRXH 623
REHALLAF + +M +T P YS+ R+ + Y+KK+GYNP F
Sbjct: 134 REHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPI 193
Query: 624 FGXHXDNMLXPST 662
G DNM+ ST
Sbjct: 194 SGFEGDNMIERST 206
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 105 bits (251), Expect = 4e-23
Identities = 47/111 (42%), Positives = 70/111 (63%)
Frame = +2
Query: 59 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWGIGXTKG 238
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW + +
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 239 XX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIV 391
A+ ET Y V ++D+P H+DF+ NM +G +Q D A+L+V
Sbjct: 306 ERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVV 356
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 105 bits (251), Expect = 4e-23
Identities = 47/111 (42%), Positives = 70/111 (63%)
Frame = +2
Query: 59 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWGIGXTKG 238
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW + +
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 239 XX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIV 391
A+ ET Y V ++D+P H+DF+ NM +G +Q D A+L+V
Sbjct: 306 ERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVV 356
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 68.5 bits (160), Expect = 5e-12
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Frame = +2
Query: 92 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWGIGXTKGXX*TWXHXRXA 271
D+GKST G +++ G +D RTI+K+EKEA++ + S+ A+ + +
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEVG 63
Query: 272 LWKFETSXYYVTIIDAP----*HRDFIXNMXTGTSQGDCAVLIVSCR 400
FET TI+DAP H+ ++ NM +G SQ D VL++S R
Sbjct: 64 RAHFETETTRFTILDAPVKMKGHKSYVPNMISGASQADIGVLVISAR 110
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 60.1 bits (139), Expect = 2e-09
Identities = 24/72 (33%), Positives = 41/72 (56%)
Frame = +2
Query: 188 MGKGSFKYAWGIGXTKGXX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQ 367
+GKGSF YAW + + + F+T Y+V ++D+P H+DF+ NM +G +Q
Sbjct: 276 IGKGSFAYAWAMDESADERERGITMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMISGATQ 335
Query: 368 GDCAVLIVSCRV 403
D A+L++ +
Sbjct: 336 SDAAILVIDASI 347
>02_04_0462 + 23131433-23132836
Length = 467
Score = 54.0 bits (124), Expect = 1e-07
Identities = 37/118 (31%), Positives = 55/118 (46%)
Frame = +2
Query: 41 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWG 220
K + K H+NI IGHVD GK+T T L + +K++ E+ + A G
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYD----EIDAAPEERARG 118
Query: 221 IGXTKGXX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIVS 394
I A ++ET + +D P H D++ NM TG +Q D A+L+VS
Sbjct: 119 ITINT-----------ATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVS 165
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 50.0 bits (114), Expect = 2e-06
Identities = 34/115 (29%), Positives = 52/115 (45%)
Frame = +2
Query: 50 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWGIGX 229
+ K H+N+ IGHVD GK+T T + K F+ E+ K + A GI
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFD----EIDKAPEEKARGITI 118
Query: 230 TKGXX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIVS 394
++ET+ + +D P H D++ NM TG +Q D +L+VS
Sbjct: 119 ATAHV-----------EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVS 162
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2
Query: 281 FETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIVSCR 400
FET TI+DAP H+ ++ NM +G SQ D VL++S R
Sbjct: 26 FETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISAR 65
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 41.9 bits (94), Expect = 5e-04
Identities = 35/121 (28%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKGSFKYA 214
M K+ N+ VI HVD GKST T L+ G I + + + A E +G +
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDTRADEAERGITIKS 72
Query: 215 WGIGXTKGXX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIVS 394
GI T R K + + Y + +ID+P H DF + D A+++V
Sbjct: 73 TGISLYYEM--TDAALRSFEGKRDGNSYLINLIDSPGHIDFSSEVTAALRITDGALVVVD 130
Query: 395 C 397
C
Sbjct: 131 C 131
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 40.7 bits (91), Expect = 0.001
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 5/123 (4%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKGSFKYA 214
M K+ N+ VI HVD GKST T L+ G I + + + A E +G +
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKS 72
Query: 215 WGIGXTKGXX*TWXHXRXALWKFET--SXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLI 388
GI L+K E + Y + +ID+P H DF + D A+++
Sbjct: 73 TGISLFY----EMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVV 128
Query: 389 VSC 397
V C
Sbjct: 129 VDC 131
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 40.7 bits (91), Expect = 0.001
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 5/123 (4%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKGSFKYA 214
M K+ N+ VI HVD GKST T L+ G I + + + A E +G +
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKS 72
Query: 215 WGIGXTKGXX*TWXHXRXALWKFET--SXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLI 388
GI L+K E + Y + +ID+P H DF + D A+++
Sbjct: 73 TGISLFY----EMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVV 128
Query: 389 VSC 397
V C
Sbjct: 129 VDC 131
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 36.3 bits (80), Expect = 0.022
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKGSFKYA 214
M K+ N+ V+ HVD GKST T L+ G I + + + + E +G +
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSRSDEAERGITIKS 72
Query: 215 WGIGXTKGXX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIVS 394
GI + + + + Y + +ID+P H DF + D A+++V
Sbjct: 73 TGISLYYEM--SDESLKSYKGDRDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVD 130
Query: 395 C 397
C
Sbjct: 131 C 131
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 35.1 bits (77), Expect = 0.052
Identities = 33/112 (29%), Positives = 49/112 (43%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWGIGXTKGXX* 247
NI + H+DSGK+T T ++Y G R E E ++ G G+ + + KG
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTG----RIHEIHEVRGRD-GVGAKMDSMDLEREKGIT- 123
Query: 248 TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIVSCRV 403
+ A + Y V IID P H DF + D A+L++ C V
Sbjct: 124 ----IQSAATYCTWNGYQVNIIDTPGHVDFTIEVERALRVLDGAILVL-CSV 170
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 31.9 bits (69), Expect = 0.48
Identities = 30/110 (27%), Positives = 49/110 (44%)
Frame = +2
Query: 62 HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWGIGXTKGX 241
HI+ V++ H+D+GK+TTT ++Y G K I +F++ M + GI T
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTGRNYK--IGEFQEGTVTMDWMEQEQERGITITS-- 159
Query: 242 X*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIV 391
A W + + + IID P H DF + D A++ +
Sbjct: 160 -----PPTTAFW----NKHRINIIDTPGHVDFTLEVERALRVLDGAIMSI 200
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 31.9 bits (69), Expect = 0.48
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCG 139
N ++ HVD GK+T HL+ CG
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG 35
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 31.5 bits (68), Expect = 0.64
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 5/125 (4%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWGIGXTKGXX* 247
N +I HVD GKST L+ G TI+K + Q + K + GI K
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTG-----TIKKGHGQPQYLDKLQVERERGI-TVKAQTA 112
Query: 248 T--WXHXRXAL---WKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIVSCRVPVX 412
T + H L + + Y + +ID P H DF + + A+L+V V
Sbjct: 113 TMFYRHANNQLPASDQPDAPSYLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQGVQ 172
Query: 413 SKLVS 427
++ ++
Sbjct: 173 AQTIA 177
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCG 139
N+ VI HVD GK+T L+ +CG
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG 89
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 29.9 bits (64), Expect = 1.9
Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWGIGXTKGXX* 247
N ++ HVD GK++ HLI G ++R E+ A+ M + I
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS-ERRVSERMAGSARVMDHLEEEQRRAI-------- 68
Query: 248 TWXHXRXALWK--FETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIV 391
T AL + + + V +ID+P H DF + D A+++V
Sbjct: 69 TMKSASIALRRGGEDGGGHRVHLIDSPGHIDFCSEVSAAARLADSALVLV 118
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 166
N +I H+D GKST L+ G + KR +++
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKREMKQ 111
>04_01_0530 - 6928528-6929500,6929514-6930964
Length = 807
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 583 RRLATTQCVAFVXILDXTGTTCW 651
RRL T C V + D +TCW
Sbjct: 390 RRLCVTDCFCAVAVFDKASSTCW 412
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 56 KTHINIVVIGHVDSG 100
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,933,325
Number of Sequences: 37544
Number of extensions: 323160
Number of successful extensions: 640
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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