Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0679
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 197 5e-51
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 197 5e-51
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 197 5e-51
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 197 5e-51
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 127 6e-30
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 111 3e-25
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 111 3e-25
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 105 3e-23
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 49 3e-06
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 49 3e-06
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 49 3e-06
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 42 4e-04
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 42 4e-04
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 34 0.081
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.25
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.25
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 32 0.32
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 29 2.3
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 29 2.3
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.0
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 197 bits (481), Expect = 5e-51
Identities = 92/118 (77%), Positives = 97/118 (82%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWGI 223
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAW +
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 224 GXTKGXX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIVSC 397
K ALWKFET+ YY+TIIDAP HRDFI NM TGTSQ DCAVL+V+C
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVAC 118
Score = 31.5 bits (68), Expect = 0.57
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = +1
Query: 400 GTGEXEAGISXNGPNPVSMPCSLLTLGVKQLI 495
GTGE EAGIS NG TLGVKQL+
Sbjct: 119 GTGEFEAGISKNGQTR-EHALLAQTLGVKQLV 149
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 197 bits (481), Expect = 5e-51
Identities = 92/118 (77%), Positives = 97/118 (82%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWGI 223
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAW +
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 224 GXTKGXX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIVSC 397
K ALWKFET+ YY+TIIDAP HRDFI NM TGTSQ DCAVL+V+C
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVAC 118
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 507 QMXSTXPPYSEXRFLGNPEGSIPYIKKIGYNP-VCRFRXHFGXHXDNMLXPST 662
+M ST PP+SE RF +IKKIGYNP F G + DNML S+
Sbjct: 120 KMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSS 172
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 197 bits (481), Expect = 5e-51
Identities = 92/118 (77%), Positives = 97/118 (82%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWGI 223
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAW +
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 224 GXTKGXX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIVSC 397
K ALWKFET+ YY+TIIDAP HRDFI NM TGTSQ DCAVL+V+C
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVAC 118
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +3
Query: 426 LXERSKPREHALLAFNPRCQTAHRRGXQMXSTXPPYSEXRFLGNPEGSIPYIKKIGYNP- 602
+ + + REHALLA + +M ST PP+SE RF +IKKIGYNP
Sbjct: 127 ISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPK 186
Query: 603 VCRFRXHFGXHXDNMLXPST 662
F G + DNML S+
Sbjct: 187 AVPFVPISGFNGDNMLEVSS 206
Score = 34.7 bits (76), Expect = 0.061
Identities = 21/37 (56%), Positives = 21/37 (56%)
Frame = +1
Query: 400 GTGEXEAGISXNGPNPVSMPCSLLTLGVKQLIVGVXK 510
GTGE EAGIS NG TLGVKQLIV K
Sbjct: 119 GTGEFEAGISKNGQTR-EHALLAQTLGVKQLIVACNK 154
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 197 bits (481), Expect = 5e-51
Identities = 92/118 (77%), Positives = 97/118 (82%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWGI 223
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAW +
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 224 GXTKGXX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIVSC 397
K ALWKFET+ YY+TIIDAP HRDFI NM TGTSQ DCAVL+V+C
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVAC 118
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +3
Query: 426 LXERSKPREHALLAFNPRCQTAHRRGXQMXSTXPPYSEXRFLGNPEGSIPYIKKIGYNP- 602
+ + + REHALLA + +M ST PP+SE RF +IKKIGYNP
Sbjct: 127 ISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPK 186
Query: 603 VCRFRXHFGXHXDNMLXPST 662
F G + DNML S+
Sbjct: 187 AVPFVPISGFNGDNMLEVSS 206
Score = 34.7 bits (76), Expect = 0.061
Identities = 21/37 (56%), Positives = 21/37 (56%)
Frame = +1
Query: 400 GTGEXEAGISXNGPNPVSMPCSLLTLGVKQLIVGVXK 510
GTGE EAGIS NG TLGVKQLIV K
Sbjct: 119 GTGEFEAGISKNGQTR-EHALLAQTLGVKQLIVACNK 154
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 127 bits (307), Expect = 6e-30
Identities = 58/64 (90%), Positives = 59/64 (92%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWGI 223
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAW +
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 224 GXTK 235
K
Sbjct: 61 DKLK 64
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 111 bits (268), Expect = 3e-25
Identities = 53/114 (46%), Positives = 72/114 (63%)
Frame = +2
Query: 53 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWGIGXT 232
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAW + T
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 233 KGXX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIVS 394
+ FETS + ++DAP H+DFI NM TGTSQ D A+L+V+
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVN 280
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 111 bits (268), Expect = 3e-25
Identities = 53/114 (46%), Positives = 72/114 (63%)
Frame = +2
Query: 53 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWGIGXT 232
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAW + T
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 233 KGXX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIVS 394
+ FETS + ++DAP H+DFI NM TGTSQ D A+L+V+
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVN 298
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 105 bits (252), Expect = 3e-23
Identities = 50/118 (42%), Positives = 71/118 (60%)
Frame = +2
Query: 47 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWGIG 226
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 227 XTKGXX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIVSCR 400
FET + TI+DAP H+ F+ NM G +Q D AVL++S R
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISAR 221
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 49.2 bits (112), Expect = 3e-06
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Frame = +2
Query: 50 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWG 220
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 104
Query: 221 IGXTKGXX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIVS 394
+ ++ET+ + ID P H D+I NM TG +Q + A+L+V+
Sbjct: 105 L------------------EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVA 144
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 49.2 bits (112), Expect = 3e-06
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Frame = +2
Query: 50 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWG 220
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 221 IGXTKGXX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIVS 394
+ ++ET+ + ID P H D+I NM TG +Q + A+L+V+
Sbjct: 106 L------------------EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVA 145
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 49.2 bits (112), Expect = 3e-06
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Frame = +2
Query: 50 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWG 220
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 221 IGXTKGXX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIVS 394
+ ++ET+ + ID P H D+I NM TG +Q + A+L+V+
Sbjct: 106 L------------------EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVA 145
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 41.9 bits (94), Expect = 4e-04
Identities = 36/113 (31%), Positives = 51/113 (45%)
Frame = +2
Query: 56 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWGIGXTK 235
K ++N+ IGH+D GK+T T + K+ K K E+ KG + GI
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQA---KKGFAKHIK-FDEIDKGKEEKKRGITIN- 97
Query: 236 GXX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIVS 394
A +E+ + D P H DFI NM GTSQ D AVL+++
Sbjct: 98 ----------VAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIA 140
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 41.9 bits (94), Expect = 4e-04
Identities = 36/113 (31%), Positives = 51/113 (45%)
Frame = +2
Query: 56 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWGIGXTK 235
K ++N+ IGH+D GK+T T + K+ K K E+ KG + GI
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQA---KKGFAKHIK-FDEIDKGKEEKKRGITIN- 97
Query: 236 GXX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIVS 394
A +E+ + D P H DFI NM GTSQ D AVL+++
Sbjct: 98 ----------VAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIA 140
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 34.3 bits (75), Expect = 0.081
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGI 145
NI VI HVD+GK+T T L+Y G I
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGID 148
NI + H+DSGK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 139
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 139
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 184
N ++ HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 26 IRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 130
IRD P K+ + V+G+VD+GKST G L +
Sbjct: 129 IRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 26 IRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 130
IRD P K+ + V+G+VD+GKST G L +
Sbjct: 129 IRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 65 INIVVIGHVDSGKSTTT 115
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 65 INIVVIGHVDSGKSTTT 115
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,763,154
Number of Sequences: 27780
Number of extensions: 253021
Number of successful extensions: 552
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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