Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0679
(676 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 195 3e-52
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 194 5e-52
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 79 4e-17
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 79 4e-17
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.50
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.2
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 22 4.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 8.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 8.1
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 195 bits (476), Expect = 3e-52
Identities = 94/117 (80%), Positives = 96/117 (82%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWGI 223
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAW +
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 224 GXTKGXX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIVS 394
K ALWKFETS YYVTIIDAP HRDFI NM TGTSQ DCAVLIV+
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 117
Score = 59.3 bits (137), Expect = 3e-11
Identities = 36/81 (44%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +3
Query: 426 LXERSKPREHALLAFNPRCQTAHRRGXQMXSTXPPYSEXRFLGNPEGSIPYIKKIGYNPV 605
+ + + REHALLAF + +M ST PPYSE RF + YIKKIGYNP
Sbjct: 127 ISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPA 186
Query: 606 C-RFRXHFGXHXDNMLXPSTK 665
F G H DNML S+K
Sbjct: 187 AVAFVPISGWHGDNMLEVSSK 207
Score = 43.2 bits (97), Expect = 2e-06
Identities = 33/76 (43%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 400 GTGEXEAGISXNGPNPVSMPCSLLTLGVKQLIVGVXKWXPLXHHTVXPDF*GIQKGVSPT 579
GTGE EAGIS NG TLGVKQLIVGV K F I+K VS
Sbjct: 119 GTGEFEAGISKNGQTR-EHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSY 177
Query: 580 SRRLA-TTQCVAFVXI 624
+++ VAFV I
Sbjct: 178 IKKIGYNPAAVAFVPI 193
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 194 bits (474), Expect = 5e-52
Identities = 93/120 (77%), Positives = 97/120 (80%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWGI 223
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAW +
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 224 GXTKGXX*TWXHXRXALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIVSCRV 403
K ALWKFET+ YYVTIIDAP HRDFI NM TGTSQ DCAVLIV+ +
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Score = 56.4 bits (130), Expect = 2e-10
Identities = 35/81 (43%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +3
Query: 426 LXERSKPREHALLAFNPRCQTAHRRGXQMXSTXPPYSEXRFLGNPEGSIPYIKKIGYNPV 605
+ + + REHALLAF + +M T PPYSE RF + YIKKIGYN
Sbjct: 127 ISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTA 186
Query: 606 -CRFRXHFGXHXDNMLXPSTK 665
F G H DNML PS K
Sbjct: 187 SVAFVPISGWHGDNMLEPSPK 207
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 79.0 bits (186), Expect = 4e-17
Identities = 36/42 (85%), Positives = 37/42 (88%)
Frame = +2
Query: 269 ALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIVS 394
ALWKFETS YYVTIIDAP HRDFI NM TGTSQ DCAVLIV+
Sbjct: 3 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 44
Score = 59.3 bits (137), Expect = 3e-11
Identities = 36/81 (44%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +3
Query: 426 LXERSKPREHALLAFNPRCQTAHRRGXQMXSTXPPYSEXRFLGNPEGSIPYIKKIGYNPV 605
+ + + REHALLAF + +M ST PPYSE RF + YIKKIGYNP
Sbjct: 54 ISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPA 113
Query: 606 C-RFRXHFGXHXDNMLXPSTK 665
F G H DNML S+K
Sbjct: 114 AVAFVPISGWHGDNMLEVSSK 134
Score = 43.2 bits (97), Expect = 2e-06
Identities = 33/76 (43%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 400 GTGEXEAGISXNGPNPVSMPCSLLTLGVKQLIVGVXKWXPLXHHTVXPDF*GIQKGVSPT 579
GTGE EAGIS NG TLGVKQLIVGV K F I+K VS
Sbjct: 46 GTGEFEAGISKNGQTR-EHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSY 104
Query: 580 SRRLA-TTQCVAFVXI 624
+++ VAFV I
Sbjct: 105 IKKIGYNPAAVAFVPI 120
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 79.0 bits (186), Expect = 4e-17
Identities = 36/42 (85%), Positives = 37/42 (88%)
Frame = +2
Query: 269 ALWKFETSXYYVTIIDAP*HRDFIXNMXTGTSQGDCAVLIVS 394
ALWKFETS YYVTIIDAP HRDFI NM TGTSQ DCAVLIV+
Sbjct: 19 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Score = 59.3 bits (137), Expect = 3e-11
Identities = 36/81 (44%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +3
Query: 426 LXERSKPREHALLAFNPRCQTAHRRGXQMXSTXPPYSEXRFLGNPEGSIPYIKKIGYNPV 605
+ + + REHALLAF + +M ST PPYSE RF + YIKKIGYNP
Sbjct: 70 ISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPA 129
Query: 606 C-RFRXHFGXHXDNMLXPSTK 665
F G H DNML S+K
Sbjct: 130 AVAFVPISGWHGDNMLEVSSK 150
Score = 43.2 bits (97), Expect = 2e-06
Identities = 33/76 (43%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 400 GTGEXEAGISXNGPNPVSMPCSLLTLGVKQLIVGVXKWXPLXHHTVXPDF*GIQKGVSPT 579
GTGE EAGIS NG TLGVKQLIVGV K F I+K VS
Sbjct: 62 GTGEFEAGISKNGQTR-EHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSY 120
Query: 580 SRRLA-TTQCVAFVXI 624
+++ VAFV I
Sbjct: 121 IKKIGYNPAAVAFVPI 136
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 25.4 bits (53), Expect = 0.50
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 56 KTHINIVVIGHVDSGKST 109
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 65 INIVVIGHVDSGKST 109
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 22.2 bits (45), Expect = 4.7
Identities = 8/26 (30%), Positives = 12/26 (46%)
Frame = -2
Query: 552 LKIWXHCMVVQWXPFVYPYDELFDTE 475
+KIW + +YP + FD E
Sbjct: 394 MKIWIPAFAIHRDSAIYPNPDSFDPE 419
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 388 RKLPGTGEXEAGISXNGPN 444
R+LPGTG + NG N
Sbjct: 372 RQLPGTGRQSELLRLNGIN 390
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 388 RKLPGTGEXEAGISXNGPN 444
R+LPGTG + NG N
Sbjct: 372 RQLPGTGRQSELLRLNGIN 390
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,752
Number of Sequences: 438
Number of extensions: 3079
Number of successful extensions: 34
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -