Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0677
         (704 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    24   1.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    24   1.0  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    24   1.4  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    24   1.4  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    24   1.4  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   3.2  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   4.2  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   4.2  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   4.2  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      22   5.6  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   7.4  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   9.8  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   9.8  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 382 VICFPVSLHISYDYRFIYFLIFLNEFF 302
           +I FP+S H S+  RF+  L F + FF
Sbjct: 64  IIQFPISAHFSFMSRFL-CLPFYSYFF 89


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 382 VICFPVSLHISYDYRFIYFLIFLNEFF 302
           +I FP+S H S+  RF+  L F + FF
Sbjct: 20  IIQFPISAHFSFMSRFL-CLPFYSYFF 45


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -2

Query: 460 TIAIIVFTTLEFLIPIFFNKS 398
           T+A I   T  FL+ I FNKS
Sbjct: 291 TVAFISIVTALFLVAINFNKS 311


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = -2

Query: 457 IAIIVFTTLEFLIPIFFNKSV*SPLVICFPVSLHISYDYRFIYFLI 320
           I II      F++P F ++    PL++ FP        +  +YF++
Sbjct: 127 ILIIPTCVAMFIVPYFQDRRE-MPLIVWFPFDYKQPVVFDLVYFIL 171


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -2

Query: 460 TIAIIVFTTLEFLIPIFFNKS 398
           T+A I   T  FL+ I FNKS
Sbjct: 291 TVAFISIVTALFLVAINFNKS 311


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 120 FYEQVLV*FINWFAVQIMYYL 58
           +YEQ  V F  ++A  I+Y+L
Sbjct: 140 YYEQYAVEFFQFYAQFIVYFL 160


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -2

Query: 679 PRSWGPMTTQR*GVSSLHHNI*TSHP*NIKEHH 581
           P    P+TTQ      + H++   HP + + HH
Sbjct: 151 PTGSPPLTTQSMNNHHMGHHMQEQHPQHHQPHH 183


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = -2

Query: 529 KYTVDYHNGGSHIFYIILHFHLNTIAIIVFTTLEFLI 419
           ++TV+Y     H FY +L + +  + ++ +  L  +I
Sbjct: 149 RHTVEYFQNYIHFFYQLLLYLITDMILMRYKELNRVI 185


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -2

Query: 679 PRSWGPMTTQR*GVSSLHHNI*TSHP*NIKEHH 581
           P    P+TTQ      + H++   HP + + HH
Sbjct: 153 PTGSPPLTTQSMNNHHMGHHMQEQHPQHHQPHH 185


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 649 AGLSWVPKIWDWG 687
           A + WV K+WD G
Sbjct: 263 APIRWVAKLWDSG 275


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 466 DENEVLCRIYENHH 507
           D NE+L R  E HH
Sbjct: 195 DNNEILLRNGEKHH 208


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = +1

Query: 400 TC*KISESKIQVW 438
           TC ++SE ++++W
Sbjct: 152 TCLRLSEKQVKIW 164


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 85  VCCSNNVLFGGFXAAIIFRLRGLSRAEF 2
           V   N ++F G    I+F  +GL+   F
Sbjct: 128 VLSKNGIVFAGLIVFILFFAQGLTSPIF 155


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,536
Number of Sequences: 336
Number of extensions: 3514
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)