Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0676
(576 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx mori... 103 4e-21
UniRef50_Q8MY33 Cluster: Reverse transcriptase; n=9; Obtectomera... 72 1e-11
UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TR... 45 0.001
UniRef50_UPI00015B460B Cluster: PREDICTED: similar to Putative 1... 37 0.30
UniRef50_Q868R6 Cluster: Reverse transcriptase; n=1; Anopheles g... 37 0.39
UniRef50_P16425 Cluster: Putative 115 kDa protein in type-1 retr... 36 0.68
UniRef50_UPI00015B47FC Cluster: PREDICTED: similar to non-LTR re... 34 2.1
UniRef50_Q10J18 Cluster: Expressed protein; n=1; Oryza sativa (j... 34 2.1
UniRef50_Q9N9Z1 Cluster: Endonuclease/reverse transcriptase; n=1... 34 2.1
UniRef50_UPI0000D5776D Cluster: PREDICTED: similar to Hypothetic... 33 3.6
UniRef50_Q4IZ83 Cluster: GTP-binding signal recognition particle... 33 3.6
UniRef50_A4XBR8 Cluster: Major facilitator superfamily MFS_1; n=... 33 3.6
UniRef50_A0AZA2 Cluster: Putative uncharacterized protein; n=1; ... 33 3.6
UniRef50_UPI0000E4882F Cluster: PREDICTED: hypothetical protein,... 33 4.8
UniRef50_A0UQ94 Cluster: Putative uncharacterized protein; n=1; ... 33 4.8
UniRef50_Q8GYI5 Cluster: Putative uncharacterized protein; n=1; ... 33 6.4
UniRef50_Q868S4 Cluster: Reverse transcriptase; n=1; Anopheles g... 33 6.4
UniRef50_Q47NP9 Cluster: Similar to membrane protein; n=1; Therm... 32 8.4
UniRef50_A5C169 Cluster: Putative uncharacterized protein; n=1; ... 32 8.4
UniRef50_Q868S6 Cluster: Reverse transcriptase; n=2; Culicidae|R... 32 8.4
UniRef50_Q868S0 Cluster: Reverse transcriptase; n=2; Anopheles g... 32 8.4
UniRef50_Q03272 Cluster: Retrovirus-related Pol polyprotein from... 32 8.4
>UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx mori|Rep:
Reverse transcriptase - Bombyx mori (Silk moth)
Length = 1076
Score = 103 bits (246), Expect = 4e-21
Identities = 61/114 (53%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Frame = +1
Query: 121 LRRPQRAIAVRAIRGYRTVSFXAACLLAGAPPWDLXAEALAADYRGVRXSLXGGRAPRRR 300
LRRPQR +A+R IRGYRTVSF AAC+LAG PPW+L AE+LAADYR R L R R
Sbjct: 839 LRRPQRTVAIRVIRGYRTVSFEAACVLAGTPPWELEAESLAADYRW-RSELR-ARGVARV 896
Query: 301 CSSXAEAPHSAVRAGGVVS---PLGGPVDGLRTVXAVRPVLADWVXRDRGFLNF 453
S A + R + S L P GLRTV AV PV DWV R G L F
Sbjct: 897 PESELRARKAHSRRSVLESWSRRLANPTWGLRTVEAVYPVFDDWVNRGEGRLTF 950
Score = 47.6 bits (108), Expect = 2e-04
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +2
Query: 323 HIRRSVLEAWSRRLXDPSMASEPSXRSARFSRTGWXATADSS-TFRATQMLTGHGCFRPV 499
H RRSVLE+WSRRL +P+ + + W + TFR Q+LTGHGCF
Sbjct: 907 HSRRSVLESWSRRLANPTWGLR-TVEAVYPVFDDWVNRGEGRLTFRLVQVLTGHGCFGKY 965
Query: 500 LQ 505
L+
Sbjct: 966 LR 967
>UniRef50_Q8MY33 Cluster: Reverse transcriptase; n=9; Obtectomera|Rep:
Reverse transcriptase - Papilio xuthus
Length = 1053
Score = 71.7 bits (168), Expect = 1e-11
Identities = 45/112 (40%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Frame = +1
Query: 121 LRRPQRAIAVRAIRGYRTVSFXAACLLAGAPPWDLXAEALAADYRGVRXSLXGGRAPRRR 300
L RPQR +A+R IRGYRTVS+ AAC LAG+ PW L AE LAA + + AP R
Sbjct: 816 LHRPQRTMAIRMIRGYRTVSYDAACTLAGSLPWVLEAEILAAIHTWRELKITTDGAPPLR 875
Query: 301 CSSXAEAPHSAVRA-GGVVSPLGGPVDGLRTVXAVRPVLADWVXRDRGFLNF 453
A A L G RT+ A+ PV W+ R G + F
Sbjct: 876 VEVEAFRKERREEAVSKWQRRLRQTRAGARTIGAICPVFMAWLRRRHGAVTF 927
>UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TRAS3
protein - Bombyx mori (Silk moth)
Length = 1682
Score = 44.8 bits (101), Expect = 0.001
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +1
Query: 112 VAALRRPQRAIAVRAIRGYRTVSFXAACLLAGAPPWDLXAEALAADYRGVRXSLXGGRAP 291
+ L QR IA + + YRTVS +A +LAG P DL A+ Y + L G A
Sbjct: 1298 IKQLAAVQRGIAQKVCKAYRTVSLNSALILAGMLPLDLRVREAASLYEAKKGQLLPGLAD 1357
Query: 292 R--RRCSSXAEAPHSAVRA 342
+ + AE PH RA
Sbjct: 1358 AEIEQMTPFAEMPHPVERA 1376
>UniRef50_UPI00015B460B Cluster: PREDICTED: similar to Putative 115
kDa protein in type-1 retrotransposable element R1DM
(Putative 115 kDa protein in type I retrotransposable
element R1DM) (ORF 2); n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Putative 115 kDa protein in type-1
retrotransposable element R1DM (Putative 115 kDa protein
in type I retrotransposable element R1DM) (ORF 2) -
Nasonia vitripennis
Length = 680
Score = 37.1 bits (82), Expect = 0.30
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = +1
Query: 121 LRRPQRAIAVRAIRGYRTVSFXAACLLAGAPPWDLXAEALAADYRGVRXSL 273
L R QR + ++R RTVS A ++AG+ PWDL L+A Y+ VR L
Sbjct: 448 LNRCQRYVLYASVRVCRTVSTEAMQVIAGSLPWDLECLRLSALYK-VRKDL 497
>UniRef50_Q868R6 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1022
Score = 36.7 bits (81), Expect = 0.39
Identities = 25/77 (32%), Positives = 38/77 (49%)
Frame = +1
Query: 100 F*CNVAALRRPQRAIAVRAIRGYRTVSFXAACLLAGAPPWDLXAEALAADYRGVRXSLXG 279
F C LRR R + R I +R+ S AAC++AG P + + DYR + S+
Sbjct: 784 FECRKQWLRRCHRPLVNRVISAFRSTSHDAACVIAGMMPLHILID---EDYRVRQRSITT 840
Query: 280 GRAPRRRCSSXAEAPHS 330
G + + + AE P+S
Sbjct: 841 GVS--SKLARIAERPYS 855
>UniRef50_P16425 Cluster: Putative 115 kDa protein in type-1
retrotransposable element R1DM; n=13; Drosophila|Rep:
Putative 115 kDa protein in type-1 retrotransposable
element R1DM - Drosophila melanogaster (Fruit fly)
Length = 1021
Score = 35.9 bits (79), Expect = 0.68
Identities = 24/51 (47%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +1
Query: 112 VAALRRP---QRAIAVRAIRGYRTVSFXAACLLAGAPPWDLXAEALAADYR 255
VAA RR QR I + + RTVS A +L GAPP DL A+ LA Y+
Sbjct: 806 VAAQRRLASCQRLILLGCLSVCRTVSTVALQVLGGAPPLDLAAKLLAIKYK 856
>UniRef50_UPI00015B47FC Cluster: PREDICTED: similar to non-LTR
retrotransposon R1Bmks ORF2 protein; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to non-LTR
retrotransposon R1Bmks ORF2 protein - Nasonia
vitripennis
Length = 986
Score = 34.3 bits (75), Expect = 2.1
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +1
Query: 133 QRAIAVRAIRGYRTVSFXAACLLAGAPPWDLXAEALAADYRGVRXSLXGG 282
QR I +R + YRTVS A C++A A P DL Y +R +L G
Sbjct: 834 QRTILLRVTKAYRTVSGDALCVIARAIPLDLVIRERMILYM-IRKNLEAG 882
>UniRef50_Q10J18 Cluster: Expressed protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Expressed protein - Oryza
sativa subsp. japonica (Rice)
Length = 124
Score = 34.3 bits (75), Expect = 2.1
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +2
Query: 113 SRRCDVRSARSRSGRSEDTAPSPSXRRACSPGRHPGTW 226
+RRC R R R GRS APSP RR + RHP W
Sbjct: 63 ARRCSARLPRRRLGRS---APSP-RRRRLARHRHPAAW 96
>UniRef50_Q9N9Z1 Cluster: Endonuclease/reverse transcriptase; n=1;
Drosophila melanogaster|Rep: Endonuclease/reverse
transcriptase - Drosophila melanogaster (Fruit fly)
Length = 989
Score = 34.3 bits (75), Expect = 2.1
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +1
Query: 124 RRPQRAIAVRAIRGYRTVSFXAACLLAGAPPWDL 225
R R +A+R IRG+RT+S AA L+G P DL
Sbjct: 795 RAVSRTMALRLIRGFRTISDDAAHALSGITPIDL 828
>UniRef50_UPI0000D5776D Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Hypothetical 115 kDa protein in type I
retrotransposable element R1DM (ORF 2) - Tribolium
castaneum
Length = 973
Score = 33.5 bits (73), Expect = 3.6
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = +1
Query: 109 NVAALRRPQRAIAVRAIRGYRTVSFXAACLLAGAPPWDLXAE 234
NV L R I R YRTVS AA ++ G PP L E
Sbjct: 772 NVVVLESTHRRILARVACAYRTVSTEAAQVITGVPPARLLVE 813
>UniRef50_Q4IZ83 Cluster: GTP-binding signal recognition particle
(SRP54) G-domain; n=1; Azotobacter vinelandii AvOP|Rep:
GTP-binding signal recognition particle (SRP54) G-domain
- Azotobacter vinelandii AvOP
Length = 758
Score = 33.5 bits (73), Expect = 3.6
Identities = 24/65 (36%), Positives = 26/65 (40%)
Frame = +1
Query: 181 FXAACLLAGAPPWDLXAEALAADYRGVRXSLXGGRAPRRRCSSXAEAPHSAVRAGGVVSP 360
F AA L AGA D AE A D R L GGR PR H + AG
Sbjct: 693 FLAAALAAGASRLDQSAEDWAMDLRARLAGLGGGRRPRGPAQQLDSLLH-LLAAGDAFRQ 751
Query: 361 LGGPV 375
LG +
Sbjct: 752 LGDEI 756
>UniRef50_A4XBR8 Cluster: Major facilitator superfamily MFS_1; n=1;
Salinispora tropica CNB-440|Rep: Major facilitator
superfamily MFS_1 - Salinispora tropica CNB-440
Length = 421
Score = 33.5 bits (73), Expect = 3.6
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +1
Query: 172 TVSFXAACLLAGAPPWDLXAEALAADYRGVRXSLXGGRAPRRRCSSXAEAPHSAVR--AG 345
+V+ A+ GAPPW L A +A G PRR S + A+R G
Sbjct: 99 SVALAASAYHLGAPPWLLIAAGVAVGVADAFYLPASGSMPRRLVSQDQLSQALALRQVGG 158
Query: 346 GVVSPLGGPVDGL 384
+V+ GGP+ G+
Sbjct: 159 QLVAMGGGPLGGV 171
>UniRef50_A0AZA2 Cluster: Putative uncharacterized protein; n=1;
Burkholderia cenocepacia HI2424|Rep: Putative
uncharacterized protein - Burkholderia cenocepacia
(strain HI2424)
Length = 222
Score = 33.5 bits (73), Expect = 3.6
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -1
Query: 195 ARRXEGDGAVSSDRPDRDRALRTSQRRDVTLKEP-NVSITIA 73
ARR G A+ PDR A+R +QRRDV ++P NV+ T A
Sbjct: 123 ARRRAGGNAIVLADPDR--AIRDAQRRDVVFRQPGNVTCTEA 162
>UniRef50_UPI0000E4882F Cluster: PREDICTED: hypothetical protein,
partial; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein, partial -
Strongylocentrotus purpuratus
Length = 806
Score = 33.1 bits (72), Expect = 4.8
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2
Query: 368 DPSMASEPSXRSARFSRTGWXATADSSTFRATQMLTGH 481
DPS +S S RS R SR G AD + AT+ + GH
Sbjct: 710 DPSSSSYTSYRSDRLSRRGLDFGADIVMYSATKYMNGH 747
>UniRef50_A0UQ94 Cluster: Putative uncharacterized protein; n=1;
Burkholderia multivorans ATCC 17616|Rep: Putative
uncharacterized protein - Burkholderia multivorans ATCC
17616
Length = 1286
Score = 33.1 bits (72), Expect = 4.8
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 95 GSFSVTSRRCDVRSARSRSGRSEDTAPSP-SXRRACSPGRHPGTWXRRRSLP 247
G+ + S RC VR SG + T SP S RR CSP R T R+ S+P
Sbjct: 1229 GTSVMRSSRCSVRCRARCSGSTRATNCSPTSVRRTCSPSR--PTRPRQSSMP 1278
>UniRef50_Q8GYI5 Cluster: Putative uncharacterized protein; n=1;
Arabidopsis thaliana|Rep: Putative uncharacterized
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 262
Score = 32.7 bits (71), Expect = 6.4
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 95 GSFSVTSRRCDVRSARSRSGRSEDTAPSPSXRRACSPGRH 214
GSF + +R+ R++RS SGRS D + RR CS G H
Sbjct: 90 GSFRLVARKRRRRNSRSVSGRSSDRS---GTRRCCSIGAH 126
>UniRef50_Q868S4 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 973
Score = 32.7 bits (71), Expect = 6.4
Identities = 32/109 (29%), Positives = 45/109 (41%)
Frame = +1
Query: 127 RPQRAIAVRAIRGYRTVSFXAACLLAGAPPWDLXAEALAADYRGVRXSLXGGRAPRRRCS 306
R R +A+R +R Y+T+S A C++A P L LA D S R S
Sbjct: 784 RVHRLLAMRVVRAYKTISHVAVCVIASMVPICL---ILAEDSECCSFSGVSNAGLSR--S 838
Query: 307 SXAEAPHSAVRAGGVVSPLGGPVDGLRTVXAVRPVLADWVXRDRGFLNF 453
S + ++ S G RT A+ P +A W R G +NF
Sbjct: 839 SAKQLSMRKWQSEWDCSTKG------RTTHALIPNIAAWTSRKHGEVNF 881
>UniRef50_Q47NP9 Cluster: Similar to membrane protein; n=1;
Thermobifida fusca YX|Rep: Similar to membrane protein -
Thermobifida fusca (strain YX)
Length = 433
Score = 32.3 bits (70), Expect = 8.4
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 113 SRRCDVRSARSRSGRSEDTAPSPSXRRACSPGRHPGTWXRRR 238
+R D R A SR+G++ + SP RA + R P RRR
Sbjct: 391 AREQDTRVAESRAGKNSEVQSSPRPDRAAAARRRPARPRRRR 432
>UniRef50_A5C169 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1144
Score = 32.3 bits (70), Expect = 8.4
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = -1
Query: 501 STGRKQPWPVSICVARKVEESAVAXHPVRENRADRXDGSEAIDGSXKRRDHASSTD 334
STG KQP C ++ + P E D D S+ + D SSTD
Sbjct: 566 STGNKQPLGERECKKNSLDRYLTSCRPAHERETDFLDQSQTATRREREYDERSSTD 621
>UniRef50_Q868S6 Cluster: Reverse transcriptase; n=2; Culicidae|Rep:
Reverse transcriptase - Anopheles gambiae (African
malaria mosquito)
Length = 1049
Score = 32.3 bits (70), Expect = 8.4
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 121 LRRPQRAIAVRAIRGYRTVSFXAACLLAGAPPWDLXAEALAADYRGVR 264
+ + R +A+R YRT+S+ A C++A P + E + ++R R
Sbjct: 843 VNKVHRKLAMRVTSAYRTISYEAVCVIASMMPLCITLEEDSKNFRKSR 890
>UniRef50_Q868S0 Cluster: Reverse transcriptase; n=2; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1009
Score = 32.3 bits (70), Expect = 8.4
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +1
Query: 121 LRRPQRAIAVRAIRGYRTVSFXAACLLAGAPPWDLXAEALAADYRGVRXSLXGGRAPR 294
LRR R + R I +RT S A C+LAG P L + + + R G R
Sbjct: 786 LRRFYRPVVQRVISSFRTTSHDAVCVLAGMIPLHLLLDEDSRTFHRRRAENIAGSVAR 843
>UniRef50_Q03272 Cluster: Retrovirus-related Pol polyprotein from
type-1 retrotransposable element R1 4
(Retrovirus-related Pol polyprotein from type I
retrotransposable element R1 4) [Includes: Reverse
transcriptase (EC 2.7.7.49); Endonuclease]; n=1; Nasonia
vitripennis|Rep: Retrovirus-related Pol polyprotein from
type-1 retrotransposable element R1 4
(Retrovirus-related Pol polyprotein from type I
retrotransposable element R1 4) [Includes: Reverse
transcriptase (EC 2.7.7.49); Endonuclease] - Nasonia
vitripennis (Parasitic wasp)
Length = 392
Score = 32.3 bits (70), Expect = 8.4
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 136 RAIAVRAIRGYRTVSFXAACLLAGAPPWDLXAEALAADY--RGVRXSLXGGRAPRRR 300
R I + R YR+ S+ AAC+LAG P + A Y R + GG RRR
Sbjct: 172 RQILIAITRCYRSTSYEAACVLAGTLPICIQLRVSVAKYHLRKGEDAEIGGVVIRRR 228
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,642,049
Number of Sequences: 1657284
Number of extensions: 7185889
Number of successful extensions: 27481
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 26257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27458
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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