Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0676
         (576 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   5.7  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   7.5  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   7.5  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   7.5  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   7.5  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 90  VSITIADFRNPFRKHKYETIQHAEL 16
           V IT+ DFR     +KY  ++ A+L
Sbjct: 405 VDITLDDFRGLCTGNKYPILRAAKL 429



 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -3

Query: 487 TTMAGKHLR 461
           TT AGKHLR
Sbjct: 344 TTAAGKHLR 352


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 214 PWDLXAEALA 243
           PWD  AEALA
Sbjct: 332 PWDKNAEALA 341


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 119 RCDVRSARSRSGRSEDTAPSPSXRRA 196
           R D+R+A+   GRS + A S   R+A
Sbjct: 38  REDIRTAKFARGRSINMALSNRGRKA 63


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 119 RCDVRSARSRSGRSEDTAPSPSXRRA 196
           R D+R+A+   GRS + A S   R+A
Sbjct: 38  REDIRTAKFARGRSINMALSNRGRKA 63


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 119 RCDVRSARSRSGRSEDTAPSPSXRRA 196
           R D+R+A+   GRS + A S   R+A
Sbjct: 38  REDIRTAKFARGRSINMALSNRGRKA 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,207
Number of Sequences: 336
Number of extensions: 1598
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)